RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 TGFB2P61812 414 aa19.05■□□□□ 0.64
LSM5-207ENST00000410044 LMBR1LQ6UX01 489 aa19.05■□□□□ 0.64
LSM5-207ENST00000410044 RPAP2Q8IXW5 612 aaPredicted RBP19.05■□□□□ 0.64
LSM5-207ENST00000410044 TNRC6CQ9HCJ0 1690 aaKnown RBP19.05■□□□□ 0.64
LSM5-207ENST00000410044 NEFLP07196 543 aa19.04■□□□□ 0.64
LSM5-207ENST00000410044 SRGNP10124 158 aa19.04■□□□□ 0.64
LSM5-207ENST00000410044 HOXA10P31260 410 aaPredicted RBP19.04■□□□□ 0.64
LSM5-207ENST00000410044 CCDC152Q4G0S7 254 aa19.04■□□□□ 0.64
LSM5-207ENST00000410044 ERICH6BQ5W0A0 696 aa19.04■□□□□ 0.64
LSM5-207ENST00000410044 CEP85Q6P2H3 762 aa19.03■□□□□ 0.64
LSM5-207ENST00000410044 C1orf115Q9H7X2 142 aa19.02■□□□□ 0.64
LSM5-207ENST00000410044 LRP5O75197 1615 aa19.01■□□□□ 0.63
LSM5-207ENST00000410044 KIAA1551Q9HCM1 1747 aa19.01■□□□□ 0.63
LSM5-207ENST00000410044 H0YIN7 160 aa19.01■□□□□ 0.63
LSM5-207ENST00000410044 NPR1P16066 1061 aa19.01■□□□□ 0.63
LSM5-207ENST00000410044 POLA2Q14181 598 aa19.01■□□□□ 0.63
LSM5-207ENST00000410044 STYK1Q6J9G0 422 aa19.01■□□□□ 0.63
LSM5-207ENST00000410044 C2CD5Q86YS7 1000 aa19.01■□□□□ 0.63
LSM5-207ENST00000410044 SSH3Q8TE77 659 aa19.01■□□□□ 0.63
LSM5-207ENST00000410044 MASTLQ96GX5 879 aa19.01■□□□□ 0.63
LSM5-207ENST00000410044 CRAMP1Q96RY5 1269 aa19.01■□□□□ 0.63
LSM5-207ENST00000410044 GREM2Q9H772 168 aa19.01■□□□□ 0.63
LSM5-207ENST00000410044 PCDHB15Q9Y5E8 787 aa19.01■□□□□ 0.63
LSM5-207ENST00000410044 KCNA3P22001 575 aa19■□□□□ 0.63
LSM5-207ENST00000410044 RFX5P48382 616 aaPredicted RBP19■□□□□ 0.63
LSM5-207ENST00000410044 SIRT2Q8IXJ6 389 aa19■□□□□ 0.63
LSM5-207ENST00000410044 RBM17Q96I25 401 aaKnown RBP19■□□□□ 0.63
LSM5-207ENST00000410044 DLEC1Q9Y238 1755 aa18.99■□□□□ 0.63
LSM5-207ENST00000410044 PNMA6EA0A0J9YXQ4 647 aa18.99■□□□□ 0.63
LSM5-207ENST00000410044 ITGA6P23229 1130 aa18.99■□□□□ 0.63
LSM5-207ENST00000410044 ALDH1B1P30837 517 aa18.99■□□□□ 0.63
LSM5-207ENST00000410044 IFIT5Q13325 482 aaKnown RBP18.99■□□□□ 0.63
LSM5-207ENST00000410044 CCDC57Q2TAC2 916 aa18.99■□□□□ 0.63
LSM5-207ENST00000410044 RPGRQ92834 1020 aaKnown RBP18.99■□□□□ 0.63
LSM5-207ENST00000410044 COL11A2P13942 1736 aaPredicted RBP18.98■□□□□ 0.63
LSM5-207ENST00000410044 ANKRD18BA2A2Z9 1011 aa18.98■□□□□ 0.63
LSM5-207ENST00000410044 SRGAP3O43295 1099 aa18.98■□□□□ 0.63
LSM5-207ENST00000410044 FAM161AQ3B820 660 aa18.98■□□□□ 0.63
LSM5-207ENST00000410044 DDX46Q7L014 1031 aaKnown RBP18.98■□□□□ 0.63
LSM5-207ENST00000410044 SEC31BQ9NQW1 1179 aa18.98■□□□□ 0.63
LSM5-207ENST00000410044 TAF1P21675 1872 aa18.97■□□□□ 0.63
LSM5-207ENST00000410044 BBOX1O75936 387 aa18.97■□□□□ 0.63
LSM5-207ENST00000410044 DPEP1P16444 411 aa18.97■□□□□ 0.63
LSM5-207ENST00000410044 CHRNA5P30532 468 aa18.97■□□□□ 0.63
LSM5-207ENST00000410044 RPS8P62241 208 aaKnown RBP18.97■□□□□ 0.63
LSM5-207ENST00000410044 PTPN12Q05209 780 aaKnown RBP18.97■□□□□ 0.63
LSM5-207ENST00000410044 GRAPQ13588 217 aa18.97■□□□□ 0.63
LSM5-207ENST00000410044 GRAPLQ8TC17 118 aaPredicted RBP18.97■□□□□ 0.63
LSM5-207ENST00000410044 CDC5LQ99459 802 aaKnown RBP18.97■□□□□ 0.63
LSM5-207ENST00000410044 COPRSQ9NQ92 184 aa18.97■□□□□ 0.63
LSM5-207ENST00000410044 FBXO3Q9UK99 471 aa18.97■□□□□ 0.63
LSM5-207ENST00000410044 A0A0G2JLW4 131 aa18.96■□□□□ 0.63
LSM5-207ENST00000410044 HMMRO75330 724 aa18.96■□□□□ 0.63
LSM5-207ENST00000410044 CNKSR1Q969H4 720 aa18.96■□□□□ 0.63
LSM5-207ENST00000410044 CCDC85AQ96PX6 553 aaPredicted RBP18.96■□□□□ 0.63
LSM5-207ENST00000410044 FHDC1Q9C0D6 1143 aaPredicted RBP18.96■□□□□ 0.63
LSM5-207ENST00000410044 PPP1R1BQ9UD71 204 aaPredicted RBP18.96■□□□□ 0.63
LSM5-207ENST00000410044 CHMP3Q9Y3E7 222 aa18.96■□□□□ 0.63
LSM5-207ENST00000410044 HDAC1Q13547 482 aaPredicted RBP18.95■□□□□ 0.62
LSM5-207ENST00000410044 CELF1Q92879 486 aaKnown RBP18.95■□□□□ 0.62
LSM5-207ENST00000410044 SYT17Q9BSW7 474 aa18.95■□□□□ 0.62
LSM5-207ENST00000410044 NOP58Q9Y2X3 529 aaKnown RBP18.95■□□□□ 0.62
LSM5-207ENST00000410044 BRCA1P38398 1863 aaKnown RBP18.94■□□□□ 0.62
LSM5-207ENST00000410044 TMC4Q7Z404 712 aa18.94■□□□□ 0.62
LSM5-207ENST00000410044 ANKRD18AQ8IVF6 992 aa18.94■□□□□ 0.62
LSM5-207ENST00000410044 ZNF622Q969S3 477 aaKnown RBP eCLIP18.94■□□□□ 0.629e-7■□□□□ 9.3
LSM5-207ENST00000410044 BSDC1Q9NW68 430 aaPredicted RBP18.94■□□□□ 0.62
LSM5-207ENST00000410044 PIM2Q9P1W9 311 aa18.94■□□□□ 0.62
LSM5-207ENST00000410044 COL4A1P02462 1669 aa18.92■□□□□ 0.62
LSM5-207ENST00000410044 CIAO1O76071 339 aa18.92■□□□□ 0.62
LSM5-207ENST00000410044 IGHMBP2P38935 993 aaKnown RBP18.92■□□□□ 0.62
LSM5-207ENST00000410044 TTLL6Q8N841 843 aa18.92■□□□□ 0.62
LSM5-207ENST00000410044 ZNF594Q96JF6 807 aaPredicted RBP18.92■□□□□ 0.62
LSM5-207ENST00000410044 DCTPP1Q9H773 170 aa18.92■□□□□ 0.62
LSM5-207ENST00000410044 RIPOR2Q9Y4F9 1068 aa18.92■□□□□ 0.62
LSM5-207ENST00000410044 SLX4Q8IY92 1834 aa18.92■□□□□ 0.62
LSM5-207ENST00000410044 EYA2O00167 538 aa18.91■□□□□ 0.62
LSM5-207ENST00000410044 LDHAL6AQ6ZMR3 332 aa18.91■□□□□ 0.62
LSM5-207ENST00000410044 SP8Q8IXZ3 490 aa18.91■□□□□ 0.62
LSM5-207ENST00000410044 KLHL34Q8N239 644 aa18.91■□□□□ 0.62
LSM5-207ENST00000410044 NLGN2Q8NFZ4 835 aa18.91■□□□□ 0.62
LSM5-207ENST00000410044 KLHDC4Q8TBB5 520 aa18.91■□□□□ 0.62
LSM5-207ENST00000410044 C7orf43Q8WVR3 580 aa18.91■□□□□ 0.62
LSM5-207ENST00000410044 RWDD1Q9H446 243 aaPredicted RBP18.91■□□□□ 0.62
LSM5-207ENST00000410044 TAF7LQ5H9L4 462 aa18.9■□□□□ 0.62
LSM5-207ENST00000410044 ATG9AQ7Z3C6 839 aa18.9■□□□□ 0.62
LSM5-207ENST00000410044 MPHOSPH8Q99549 860 aa18.9■□□□□ 0.62
LSM5-207ENST00000410044 PA2G4Q9UQ80 394 aaKnown RBP18.9■□□□□ 0.62
LSM5-207ENST00000410044 ATP6V0A2Q9Y487 856 aa18.9■□□□□ 0.62
LSM5-207ENST00000410044 SURF6O75683 361 aaKnown RBP18.89■□□□□ 0.61
LSM5-207ENST00000410044 HSP90AB4PQ58FF6 505 aa18.89■□□□□ 0.61
LSM5-207ENST00000410044 CC2D2BQ6DHV5 1058 aa18.89■□□□□ 0.61
LSM5-207ENST00000410044 PRPF40BQ6NWY9 871 aaKnown RBP18.89■□□□□ 0.61
LSM5-207ENST00000410044 PUS3Q9BZE2 481 aaKnown RBP18.89■□□□□ 0.61
LSM5-207ENST00000410044 PPEF1O14829 653 aaPredicted RBP18.88■□□□□ 0.61
LSM5-207ENST00000410044 IGHDP01880 384 aa18.88■□□□□ 0.61
LSM5-207ENST00000410044 IL15P40933 162 aaPredicted RBP18.88■□□□□ 0.61
LSM5-207ENST00000410044 G3BP1Q13283 466 aaKnown RBP eCLIP18.88■□□□□ 0.61
LSM5-207ENST00000410044 LRRC24Q50LG9 513 aa18.88■□□□□ 0.61
LSM5-207ENST00000410044 DALRD3Q5D0E6 543 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms