RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 CHRNA5P30532 468 aa18.03■□□□□ 0.48
LIMS2-209ENST00000410038 CTSWP56202 376 aa18.03■□□□□ 0.48
LIMS2-209ENST00000410038 TGFB2P61812 414 aa18.03■□□□□ 0.48
LIMS2-209ENST00000410038 SF3B3Q15393 1217 aaKnown RBP18.03■□□□□ 0.48
LIMS2-209ENST00000410038 SRGNP10124 158 aa18.03■□□□□ 0.48
LIMS2-209ENST00000410038 C2CD5Q86YS7 1000 aa18.03■□□□□ 0.48
LIMS2-209ENST00000410038 CRBNQ96SW2 442 aa18.03■□□□□ 0.48
LIMS2-209ENST00000410038 LRRFIP2Q9Y608 721 aaKnown RBP18.03■□□□□ 0.48
LIMS2-209ENST00000410038 A0A0G2JLW4 131 aa18.02■□□□□ 0.47
LIMS2-209ENST00000410038 H0YIN7 160 aa18.02■□□□□ 0.47
LIMS2-209ENST00000410038 GRIN3BO60391 1043 aa18.02■□□□□ 0.47
LIMS2-209ENST00000410038 NLGN2Q8NFZ4 835 aa18.02■□□□□ 0.47
LIMS2-209ENST00000410038 TTLL11Q8NHH1 800 aa18.02■□□□□ 0.47
LIMS2-209ENST00000410038 BICC1Q9H694 974 aaKnown RBP18.02■□□□□ 0.47
LIMS2-209ENST00000410038 PDZRN3Q9UPQ7 1066 aa18.02■□□□□ 0.47
LIMS2-209ENST00000410038 GNAI2P04899 355 aa18.01■□□□□ 0.47
LIMS2-209ENST00000410038 CSF1RP07333 972 aa18.01■□□□□ 0.47
LIMS2-209ENST00000410038 DPEP1P16444 411 aa18.01■□□□□ 0.47
LIMS2-209ENST00000410038 ZBTB40Q9NUA8 1239 aa18.01■□□□□ 0.47
LIMS2-209ENST00000410038 HDAC5Q9UQL6 1122 aa18.01■□□□□ 0.47
LIMS2-209ENST00000410038 UTRNP46939 3433 aa18.01■□□□□ 0.47
LIMS2-209ENST00000410038 KCNA3P22001 575 aa18■□□□□ 0.47
LIMS2-209ENST00000410038 IRX6P78412 446 aaPredicted RBP18■□□□□ 0.47
LIMS2-209ENST00000410038 RABL6Q3YEC7 729 aaPredicted RBP18■□□□□ 0.47
LIMS2-209ENST00000410038 LMBR1LQ6UX01 489 aa18■□□□□ 0.47
LIMS2-209ENST00000410038 ANKRD44Q8N8A2 993 aa18■□□□□ 0.47
LIMS2-209ENST00000410038 CCDC85AQ96PX6 553 aaPredicted RBP18■□□□□ 0.47
LIMS2-209ENST00000410038 NPR1P16066 1061 aa17.99■□□□□ 0.47
LIMS2-209ENST00000410038 CCDC152Q4G0S7 254 aa17.99■□□□□ 0.47
LIMS2-209ENST00000410038 RPGRQ92834 1020 aaKnown RBP17.99■□□□□ 0.47
LIMS2-209ENST00000410038 MASTLQ96GX5 879 aa17.99■□□□□ 0.47
LIMS2-209ENST00000410038 CHMP4BQ9H444 224 aaKnown RBP17.99■□□□□ 0.47
LIMS2-209ENST00000410038 C1orf115Q9H7X2 142 aa17.99■□□□□ 0.47
LIMS2-209ENST00000410038 HOXA10P31260 410 aaPredicted RBP17.99■□□□□ 0.47
LIMS2-209ENST00000410038 GREM2Q9H772 168 aa17.99■□□□□ 0.47
LIMS2-209ENST00000410038 COL4A1P02462 1669 aa17.99■□□□□ 0.47
LIMS2-209ENST00000410038 SLX4Q8IY92 1834 aa17.98■□□□□ 0.47
LIMS2-209ENST00000410038 SPEF2Q9C093 1822 aa17.98■□□□□ 0.47
LIMS2-209ENST00000410038 STYK1Q6J9G0 422 aa17.98■□□□□ 0.47
LIMS2-209ENST00000410038 ZNF622Q969S3 477 aaKnown RBP eCLIP17.98■□□□□ 0.47
LIMS2-209ENST00000410038 RTL9Q8NET4 1388 aa17.98■□□□□ 0.47
LIMS2-209ENST00000410038 FAM161AQ3B820 660 aa17.97■□□□□ 0.47
LIMS2-209ENST00000410038 DDX46Q7L014 1031 aaKnown RBP17.97■□□□□ 0.47
LIMS2-209ENST00000410038 RBM17Q96I25 401 aaKnown RBP17.97■□□□□ 0.47
LIMS2-209ENST00000410038 SEC31BQ9NQW1 1179 aa17.97■□□□□ 0.47
LIMS2-209ENST00000410038 EXOC6Q8TAG9 804 aa17.96■□□□□ 0.47
LIMS2-209ENST00000410038 CRAMP1Q96RY5 1269 aa17.96■□□□□ 0.47
LIMS2-209ENST00000410038 CHMP3Q9Y3E7 222 aa17.96■□□□□ 0.47
LIMS2-209ENST00000410038 ITGA6P23229 1130 aa17.96■□□□□ 0.47
LIMS2-209ENST00000410038 PIM2Q9P1W9 311 aa17.96■□□□□ 0.47
LIMS2-209ENST00000410038 ALDH1B1P30837 517 aa17.95■□□□□ 0.46
LIMS2-209ENST00000410038 MTX1Q13505 466 aa17.95■□□□□ 0.46
LIMS2-209ENST00000410038 CELF1Q92879 486 aaKnown RBP17.94■□□□□ 0.46
LIMS2-209ENST00000410038 CNKSR1Q969H4 720 aa17.94■□□□□ 0.46
LIMS2-209ENST00000410038 WWC3Q9ULE0 1092 aa17.94■□□□□ 0.46
LIMS2-209ENST00000410038 ARFGEF1Q9Y6D6 1849 aa17.94■□□□□ 0.46
LIMS2-209ENST00000410038 C1QTNF8P60827 252 aa17.93■□□□□ 0.46
LIMS2-209ENST00000410038 IFIT5Q13325 482 aaKnown RBP17.93■□□□□ 0.46
LIMS2-209ENST00000410038 GRAPQ13588 217 aa17.93■□□□□ 0.46
LIMS2-209ENST00000410038 CCDC57Q2TAC2 916 aa17.93■□□□□ 0.46
LIMS2-209ENST00000410038 CEP85Q6P2H3 762 aa17.93■□□□□ 0.46
LIMS2-209ENST00000410038 TTLL6Q8N841 843 aa17.93■□□□□ 0.46
LIMS2-209ENST00000410038 GRAPLQ8TC17 118 aaPredicted RBP17.93■□□□□ 0.46
LIMS2-209ENST00000410038 PNMA6EA0A0J9YXQ4 647 aa17.93■□□□□ 0.46
LIMS2-209ENST00000410038 ANKRD18BA2A2Z9 1011 aa17.93■□□□□ 0.46
LIMS2-209ENST00000410038 PRPF40BQ6NWY9 871 aaKnown RBP17.93■□□□□ 0.46
LIMS2-209ENST00000410038 CDC5LQ99459 802 aaKnown RBP17.93■□□□□ 0.46
LIMS2-209ENST00000410038 SRGAP3O43295 1099 aa17.92■□□□□ 0.46
LIMS2-209ENST00000410038 RFX5P48382 616 aaPredicted RBP17.92■□□□□ 0.46
LIMS2-209ENST00000410038 RPS8P62241 208 aaKnown RBP17.92■□□□□ 0.46
LIMS2-209ENST00000410038 ATP8B2P98198 1209 aa17.92■□□□□ 0.46
LIMS2-209ENST00000410038 DALRD3Q5D0E6 543 aaKnown RBP17.91■□□□□ 0.46
LIMS2-209ENST00000410038 ANKRD18AQ8IVF6 992 aa17.91■□□□□ 0.46
LIMS2-209ENST00000410038 RPAP2Q8IXW5 612 aaPredicted RBP17.91■□□□□ 0.46
LIMS2-209ENST00000410038 ZNF594Q96JF6 807 aaPredicted RBP17.91■□□□□ 0.46
LIMS2-209ENST00000410038 LRRC37AA6NMS7 1700 aa17.91■□□□□ 0.46
LIMS2-209ENST00000410038 BBOX1O75936 387 aa17.9■□□□□ 0.46
LIMS2-209ENST00000410038 AAMPQ13685 434 aa17.9■□□□□ 0.46
LIMS2-209ENST00000410038 PPEF1O14829 653 aaPredicted RBP17.9■□□□□ 0.46
LIMS2-209ENST00000410038 YBX3P16989 372 aaKnown RBP eCLIP17.9■□□□□ 0.46
LIMS2-209ENST00000410038 PTPN12Q05209 780 aaKnown RBP17.9■□□□□ 0.46
LIMS2-209ENST00000410038 SLC51AQ86UW1 340 aa17.9■□□□□ 0.46
LIMS2-209ENST00000410038 SIRT2Q8IXJ6 389 aa17.9■□□□□ 0.46
LIMS2-209ENST00000410038 KLHDC4Q8TBB5 520 aa17.9■□□□□ 0.46
LIMS2-209ENST00000410038 SSH3Q8TE77 659 aa17.9■□□□□ 0.46
LIMS2-209ENST00000410038 BCS1LQ9Y276 419 aa17.9■□□□□ 0.46
LIMS2-209ENST00000410038 PCDHB15Q9Y5E8 787 aa17.9■□□□□ 0.46
LIMS2-209ENST00000410038 IGHMBP2P38935 993 aaKnown RBP17.89■□□□□ 0.45
LIMS2-209ENST00000410038 POLA2Q14181 598 aa17.89■□□□□ 0.45
LIMS2-209ENST00000410038 TAF7LQ5H9L4 462 aa17.89■□□□□ 0.45
LIMS2-209ENST00000410038 C7orf43Q8WVR3 580 aa17.89■□□□□ 0.45
LIMS2-209ENST00000410038 A0A1B0GUL6 1792 aa17.89■□□□□ 0.45
LIMS2-209ENST00000410038 BSDC1Q9NW68 430 aaPredicted RBP17.88■□□□□ 0.45
LIMS2-209ENST00000410038 ZNF219Q9P2Y4 722 aaPredicted RBP17.88■□□□□ 0.45
LIMS2-209ENST00000410038 PA2G4Q9UQ80 394 aaKnown RBP17.88■□□□□ 0.45
LIMS2-209ENST00000410038 C21orf2O43822 256 aa17.87■□□□□ 0.45
LIMS2-209ENST00000410038 NEFLP07196 543 aa17.87■□□□□ 0.45
LIMS2-209ENST00000410038 OLFM4Q6UX06 510 aa17.87■□□□□ 0.45
LIMS2-209ENST00000410038 LDHAL6AQ6ZMR3 332 aa17.87■□□□□ 0.45
LIMS2-209ENST00000410038 TMC4Q7Z404 712 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms