RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 ALDH8A1Q9H2A2 487 aaPredicted RBP18.03■□□□□ 0.48
LYSMD4-204ENST00000409796 SCN11AQ9UI33 1791 aa18.02■□□□□ 0.48
LYSMD4-204ENST00000409796 LIG1P18858 919 aa18.02■□□□□ 0.48
LYSMD4-204ENST00000409796 PDCP20941 246 aa18.02■□□□□ 0.48
LYSMD4-204ENST00000409796 COPS6Q7L5N1 327 aa18.02■□□□□ 0.48
LYSMD4-204ENST00000409796 JARID2Q92833 1246 aaPredicted RBP18.02■□□□□ 0.48
LYSMD4-204ENST00000409796 TAF5LO75529 589 aa18.02■□□□□ 0.47
LYSMD4-204ENST00000409796 STK3Q13188 491 aa18.02■□□□□ 0.47
LYSMD4-204ENST00000409796 SMAP1Q8IYB5 467 aaPredicted RBP18.02■□□□□ 0.47
LYSMD4-204ENST00000409796 ARID3AQ99856 593 aa18.02■□□□□ 0.47
LYSMD4-204ENST00000409796 TRPM3Q9HCF6 1732 aaPredicted RBP18.02■□□□□ 0.47
LYSMD4-204ENST00000409796 CCDC192P0DO97 292 aa18.01■□□□□ 0.47
LYSMD4-204ENST00000409796 METTL22Q9BUU2 404 aaPredicted RBP18.01■□□□□ 0.47
LYSMD4-204ENST00000409796 ELP1O95163 1332 aa18.01■□□□□ 0.47
LYSMD4-204ENST00000409796 PDIA4P13667 645 aaKnown RBP18.01■□□□□ 0.47
LYSMD4-204ENST00000409796 SLC52A2Q9HAB3 445 aa18.01■□□□□ 0.47
LYSMD4-204ENST00000409796 HMG20BQ9P0W2 317 aa18.01■□□□□ 0.47
LYSMD4-204ENST00000409796 COL15A1P39059 1388 aa18.01■□□□□ 0.47
LYSMD4-204ENST00000409796 KDM6AO15550 1401 aaPredicted RBP18.01■□□□□ 0.47
LYSMD4-204ENST00000409796 TSGA10IPQ3SY00 556 aa18■□□□□ 0.47
LYSMD4-204ENST00000409796 NUP62CLQ9H1M0 184 aa18■□□□□ 0.47
LYSMD4-204ENST00000409796 TFIP11Q9UBB9 837 aaKnown RBP18■□□□□ 0.47
LYSMD4-204ENST00000409796 DBNLQ9UJU6 430 aaKnown RBP18■□□□□ 0.47
LYSMD4-204ENST00000409796 ERBB3P21860 1342 aa18■□□□□ 0.47
LYSMD4-204ENST00000409796 CAMK4Q16566 473 aa17.99■□□□□ 0.47
LYSMD4-204ENST00000409796 NFATC2IPQ8NCF5 419 aa17.99■□□□□ 0.47
LYSMD4-204ENST00000409796 COPRSQ9NQ92 184 aa17.99■□□□□ 0.47
LYSMD4-204ENST00000409796 NDUFB9Q9Y6M9 179 aa17.99■□□□□ 0.47
LYSMD4-204ENST00000409796 AFDNP55196 1824 aaKnown RBP17.99■□□□□ 0.47
LYSMD4-204ENST00000409796 ATP5JP18859 108 aa17.99■□□□□ 0.47
LYSMD4-204ENST00000409796 RFX5P48382 616 aaPredicted RBP17.99■□□□□ 0.47
LYSMD4-204ENST00000409796 ZC3H6P61129 1189 aaKnown RBP17.99■□□□□ 0.47
LYSMD4-204ENST00000409796 MAP3K11Q16584 847 aa17.99■□□□□ 0.47
LYSMD4-204ENST00000409796 USPL1Q5W0Q7 1092 aa17.99■□□□□ 0.47
LYSMD4-204ENST00000409796 KRT28Q7Z3Y7 464 aa17.99■□□□□ 0.47
LYSMD4-204ENST00000409796 NPHP3Q7Z494 1330 aa17.99■□□□□ 0.47
LYSMD4-204ENST00000409796 PIP4K2AP48426 406 aaPredicted RBP17.98■□□□□ 0.47
LYSMD4-204ENST00000409796 TFCP2Q12800 502 aa17.98■□□□□ 0.47
LYSMD4-204ENST00000409796 TNNI3KQ59H18 835 aa17.98■□□□□ 0.47
LYSMD4-204ENST00000409796 MYRIPQ8NFW9 859 aa17.98■□□□□ 0.47
LYSMD4-204ENST00000409796 SPTLC3Q9NUV7 552 aa17.98■□□□□ 0.47
LYSMD4-204ENST00000409796 FPGT-TNNI3KV9GXZ4 949 aa17.98■□□□□ 0.47
LYSMD4-204ENST00000409796 CHGBP05060 677 aa17.98■□□□□ 0.47
LYSMD4-204ENST00000409796 PTPN12Q05209 780 aaKnown RBP17.98■□□□□ 0.47
LYSMD4-204ENST00000409796 RAPGEF4Q8WZA2 1011 aa17.98■□□□□ 0.47
LYSMD4-204ENST00000409796 ZNF496Q96IT1 587 aaPredicted RBP17.98■□□□□ 0.47
LYSMD4-204ENST00000409796 MRVI1Q9Y6F6 885 aa17.98■□□□□ 0.47
LYSMD4-204ENST00000409796 TYRO3Q06418 890 aa17.97■□□□□ 0.47
LYSMD4-204ENST00000409796 ANKRD13DQ6ZTN6 518 aa17.97■□□□□ 0.47
LYSMD4-204ENST00000409796 SPATA32Q96LK8 384 aa17.97■□□□□ 0.47
LYSMD4-204ENST00000409796 KCNF1Q9H3M0 494 aa17.97■□□□□ 0.47
LYSMD4-204ENST00000409796 ZNF142P52746 1687 aaPredicted RBP17.97■□□□□ 0.47
LYSMD4-204ENST00000409796 JAK2O60674 1132 aa17.97■□□□□ 0.47
LYSMD4-204ENST00000409796 CCDC129Q6ZRS4 1044 aa17.97■□□□□ 0.47
LYSMD4-204ENST00000409796 LRP10Q7Z4F1 713 aa17.97■□□□□ 0.47
LYSMD4-204ENST00000409796 SPC24Q8NBT2 197 aa17.97■□□□□ 0.47
LYSMD4-204ENST00000409796 FAM200AQ8TCP9 573 aa17.97■□□□□ 0.47
LYSMD4-204ENST00000409796 SCAND2PQ9GZW5 306 aaPredicted RBP17.97■□□□□ 0.47
LYSMD4-204ENST00000409796 DACT1Q9NYF0 836 aa17.97■□□□□ 0.47
LYSMD4-204ENST00000409796 USP16Q9Y5T5 823 aa17.97■□□□□ 0.47
LYSMD4-204ENST00000409796 A0A0U1RQG5 324 aaPredicted RBP17.96■□□□□ 0.47
LYSMD4-204ENST00000409796 PHKG2P15735 406 aa17.96■□□□□ 0.47
LYSMD4-204ENST00000409796 LEO1Q8WVC0 666 aaPredicted RBP17.96■□□□□ 0.47
LYSMD4-204ENST00000409796 PRDM10Q9NQV6 1147 aa17.96■□□□□ 0.47
LYSMD4-204ENST00000409796 ZNF609O15014 1411 aa17.96■□□□□ 0.47
LYSMD4-204ENST00000409796 KRT32Q14532 448 aa17.96■□□□□ 0.47
LYSMD4-204ENST00000409796 MTERF4Q7Z6M4 381 aaKnown RBP17.96■□□□□ 0.47
LYSMD4-204ENST00000409796 CKAP2LQ8IYA6 745 aa17.96■□□□□ 0.47
LYSMD4-204ENST00000409796 NEK1Q96PY6 1258 aa17.96■□□□□ 0.47
LYSMD4-204ENST00000409796 SEC62Q99442 399 aaKnown RBP17.96■□□□□ 0.47
LYSMD4-204ENST00000409796 NLRP2Q9NX02 1062 aa17.96■□□□□ 0.47
LYSMD4-204ENST00000409796 GTF3C6Q969F1 213 aa17.95■□□□□ 0.46
LYSMD4-204ENST00000409796 PRIMPOLQ96LW4 560 aa17.95■□□□□ 0.46
LYSMD4-204ENST00000409796 DNAJC2Q99543 621 aaKnown RBP17.95■□□□□ 0.46
LYSMD4-204ENST00000409796 TNMDQ9H2S6 317 aa17.95■□□□□ 0.46
LYSMD4-204ENST00000409796 PYCARDQ9ULZ3 195 aa17.95■□□□□ 0.46
LYSMD4-204ENST00000409796 GOLGA6L4A6NEF3 574 aa17.95■□□□□ 0.46
LYSMD4-204ENST00000409796 UBE3BQ7Z3V4 1068 aa17.95■□□□□ 0.46
LYSMD4-204ENST00000409796 DBNDD2Q9BQY9 259 aa17.95■□□□□ 0.46
LYSMD4-204ENST00000409796 Q6ZUG5 572 aa17.95■□□□□ 0.46
LYSMD4-204ENST00000409796 LUZP1Q86V48 1076 aa17.95■□□□□ 0.46
LYSMD4-204ENST00000409796 KIAA1524Q8TCG1 905 aa17.95■□□□□ 0.46
LYSMD4-204ENST00000409796 TATP17735 454 aaPredicted RBP17.94■□□□□ 0.46
LYSMD4-204ENST00000409796 ARFGEF2Q9Y6D5 1785 aa17.94■□□□□ 0.46
LYSMD4-204ENST00000409796 ATP5J2-PTCD1G3V325 749 aa17.94■□□□□ 0.46
LYSMD4-204ENST00000409796 PTCD1O75127 700 aaKnown RBP17.94■□□□□ 0.46
LYSMD4-204ENST00000409796 RABL6Q3YEC7 729 aaPredicted RBP17.94■□□□□ 0.46
LYSMD4-204ENST00000409796 BRF1Q92994 677 aa17.94■□□□□ 0.46
LYSMD4-204ENST00000409796 PGBD1Q96JS3 809 aa17.94■□□□□ 0.46
LYSMD4-204ENST00000409796 ZHX1Q9UKY1 873 aaPredicted RBP17.94■□□□□ 0.46
LYSMD4-204ENST00000409796 U3KPZ7 1027 aaPredicted RBP17.94■□□□□ 0.46
LYSMD4-204ENST00000409796 MEGF6O75095 1541 aa17.93■□□□□ 0.46
LYSMD4-204ENST00000409796 LAMA4Q16363 1823 aa17.93■□□□□ 0.46
LYSMD4-204ENST00000409796 CYP21A2P08686 494 aa17.93■□□□□ 0.46
LYSMD4-204ENST00000409796 RESTQ13127 1097 aa17.93■□□□□ 0.46
LYSMD4-204ENST00000409796 CLSTN2Q9H4D0 955 aa17.93■□□□□ 0.46
LYSMD4-204ENST00000409796 DDX19AQ9NUU7 478 aaKnown RBP17.93■□□□□ 0.46
LYSMD4-204ENST00000409796 RFX7Q2KHR2 1363 aa17.93■□□□□ 0.46
LYSMD4-204ENST00000409796 TPM3P06753 285 aa17.93■□□□□ 0.46
LYSMD4-204ENST00000409796 SNRPA1P09661 255 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms