RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 LRRFIP2Q9Y608 721 aaKnown RBP20.85■□□□□ 0.93
SUMO1-208ENST00000409627 CACNA1SQ13698 1873 aa20.85■□□□□ 0.93
SUMO1-208ENST00000409627 RTL9Q8NET4 1388 aa20.85■□□□□ 0.93
SUMO1-208ENST00000409627 H0YIN7 160 aa20.84■□□□□ 0.93
SUMO1-208ENST00000409627 CSF1RP07333 972 aa20.84■□□□□ 0.93
SUMO1-208ENST00000409627 CCDC152Q4G0S7 254 aa20.84■□□□□ 0.93
SUMO1-208ENST00000409627 TTLL11Q8NHH1 800 aa20.84■□□□□ 0.93
SUMO1-208ENST00000409627 BICC1Q9H694 974 aaKnown RBP20.84■□□□□ 0.93
SUMO1-208ENST00000409627 ZBTB40Q9NUA8 1239 aa20.84■□□□□ 0.93
SUMO1-208ENST00000409627 NPR1P16066 1061 aa20.83■□□□□ 0.93
SUMO1-208ENST00000409627 CHRNA5P30532 468 aa20.83■□□□□ 0.93
SUMO1-208ENST00000409627 HOXA10P31260 410 aaPredicted RBP20.83■□□□□ 0.93
SUMO1-208ENST00000409627 ANKRD44Q8N8A2 993 aa20.83■□□□□ 0.93
SUMO1-208ENST00000409627 RPGRQ92834 1020 aaKnown RBP20.83■□□□□ 0.93
SUMO1-208ENST00000409627 TAF1P21675 1872 aa20.82■□□□□ 0.92
SUMO1-208ENST00000409627 DPEP1P16444 411 aa20.82■□□□□ 0.92
SUMO1-208ENST00000409627 STYK1Q6J9G0 422 aa20.82■□□□□ 0.92
SUMO1-208ENST00000409627 LMBR1LQ6UX01 489 aa20.82■□□□□ 0.92
SUMO1-208ENST00000409627 MASTLQ96GX5 879 aa20.82■□□□□ 0.92
SUMO1-208ENST00000409627 NLGN2Q8NFZ4 835 aa20.81■□□□□ 0.92
SUMO1-208ENST00000409627 RBM17Q96I25 401 aaKnown RBP20.81■□□□□ 0.92
SUMO1-208ENST00000409627 SYT17Q9BSW7 474 aa20.81■□□□□ 0.92
SUMO1-208ENST00000409627 SPEF2Q9C093 1822 aa20.81■□□□□ 0.92
SUMO1-208ENST00000409627 A0A0G2JLW4 131 aa20.8■□□□□ 0.92
SUMO1-208ENST00000409627 KCNA3P22001 575 aa20.8■□□□□ 0.92
SUMO1-208ENST00000409627 MTX1Q13505 466 aa20.8■□□□□ 0.92
SUMO1-208ENST00000409627 DDX46Q7L014 1031 aaKnown RBP20.8■□□□□ 0.92
SUMO1-208ENST00000409627 CRAMP1Q96RY5 1269 aa20.8■□□□□ 0.92
SUMO1-208ENST00000409627 GREM2Q9H772 168 aa20.8■□□□□ 0.92
SUMO1-208ENST00000409627 AAMPQ13685 434 aa20.79■□□□□ 0.92
SUMO1-208ENST00000409627 FAM161AQ3B820 660 aa20.79■□□□□ 0.92
SUMO1-208ENST00000409627 CCDC85AQ96PX6 553 aaPredicted RBP20.79■□□□□ 0.92
SUMO1-208ENST00000409627 C1orf115Q9H7X2 142 aa20.79■□□□□ 0.92
SUMO1-208ENST00000409627 COL4A1P02462 1669 aa20.79■□□□□ 0.92
SUMO1-208ENST00000409627 ALDH1B1P30837 517 aa20.78■□□□□ 0.92
SUMO1-208ENST00000409627 CNKSR1Q969H4 720 aa20.78■□□□□ 0.92
SUMO1-208ENST00000409627 ZNF622Q969S3 477 aaKnown RBP eCLIP20.78■□□□□ 0.92
SUMO1-208ENST00000409627 CHMP3Q9Y3E7 222 aa20.78■□□□□ 0.92
SUMO1-208ENST00000409627 SLX4Q8IY92 1834 aa20.78■□□□□ 0.92
SUMO1-208ENST00000409627 ARFGEF1Q9Y6D6 1849 aa20.78■□□□□ 0.92
SUMO1-208ENST00000409627 ITGA6P23229 1130 aa20.77■□□□□ 0.92
SUMO1-208ENST00000409627 IRX6P78412 446 aaPredicted RBP20.77■□□□□ 0.92
SUMO1-208ENST00000409627 IFIT5Q13325 482 aaKnown RBP20.77■□□□□ 0.92
SUMO1-208ENST00000409627 GRAPQ13588 217 aa20.77■□□□□ 0.92
SUMO1-208ENST00000409627 EXOC6Q8TAG9 804 aa20.77■□□□□ 0.92
SUMO1-208ENST00000409627 GRAPLQ8TC17 118 aaPredicted RBP20.77■□□□□ 0.92
SUMO1-208ENST00000409627 LRRC37AA6NMS7 1700 aa20.77■□□□□ 0.92
SUMO1-208ENST00000409627 ANKRD18BA2A2Z9 1011 aa20.76■□□□□ 0.91
SUMO1-208ENST00000409627 CCDC57Q2TAC2 916 aa20.76■□□□□ 0.91
SUMO1-208ENST00000409627 CDC5LQ99459 802 aaKnown RBP20.76■□□□□ 0.91
SUMO1-208ENST00000409627 SEC31BQ9NQW1 1179 aa20.76■□□□□ 0.91
SUMO1-208ENST00000409627 PIM2Q9P1W9 311 aa20.76■□□□□ 0.91
SUMO1-208ENST00000409627 CEP85Q6P2H3 762 aa20.75■□□□□ 0.91
SUMO1-208ENST00000409627 TTLL6Q8N841 843 aa20.75■□□□□ 0.91
SUMO1-208ENST00000409627 SRGAP3O43295 1099 aa20.74■□□□□ 0.91
SUMO1-208ENST00000409627 ATP8B2P98198 1209 aa20.74■□□□□ 0.91
SUMO1-208ENST00000409627 RPAP2Q8IXW5 612 aaPredicted RBP20.74■□□□□ 0.91
SUMO1-208ENST00000409627 CELF1Q92879 486 aaKnown RBP20.74■□□□□ 0.91
SUMO1-208ENST00000409627 A0A1B0GUL6 1792 aa20.73■□□□□ 0.91
SUMO1-208ENST00000409627 PNMA6EA0A0J9YXQ4 647 aa20.73■□□□□ 0.91
SUMO1-208ENST00000409627 BBOX1O75936 387 aa20.73■□□□□ 0.91
SUMO1-208ENST00000409627 RFX5P48382 616 aaPredicted RBP20.73■□□□□ 0.91
SUMO1-208ENST00000409627 RPS8P62241 208 aaKnown RBP20.73■□□□□ 0.91
SUMO1-208ENST00000409627 PRPF40BQ6NWY9 871 aaKnown RBP20.73■□□□□ 0.91
SUMO1-208ENST00000409627 TMC4Q7Z404 712 aa20.73■□□□□ 0.91
SUMO1-208ENST00000409627 ANKRD18AQ8IVF6 992 aa20.73■□□□□ 0.91
SUMO1-208ENST00000409627 NEFLP07196 543 aa20.72■□□□□ 0.91
SUMO1-208ENST00000409627 IGHMBP2P38935 993 aaKnown RBP20.72■□□□□ 0.91
SUMO1-208ENST00000409627 POLA2Q14181 598 aa20.72■□□□□ 0.91
SUMO1-208ENST00000409627 DALRD3Q5D0E6 543 aaKnown RBP20.72■□□□□ 0.91
SUMO1-208ENST00000409627 SSH3Q8TE77 659 aa20.72■□□□□ 0.91
SUMO1-208ENST00000409627 PPEF1O14829 653 aaPredicted RBP20.71■□□□□ 0.91
SUMO1-208ENST00000409627 TAF7LQ5H9L4 462 aa20.71■□□□□ 0.91
SUMO1-208ENST00000409627 PTPN12Q05209 780 aaKnown RBP20.7■□□□□ 0.9
SUMO1-208ENST00000409627 BSDC1Q9NW68 430 aaPredicted RBP20.7■□□□□ 0.9
SUMO1-208ENST00000409627 SIRT2Q8IXJ6 389 aa20.69■□□□□ 0.9
SUMO1-208ENST00000409627 C7orf43Q8WVR3 580 aa20.69■□□□□ 0.9
SUMO1-208ENST00000409627 ZNF594Q96JF6 807 aaPredicted RBP20.69■□□□□ 0.9
SUMO1-208ENST00000409627 MPHOSPH8Q99549 860 aa20.69■□□□□ 0.9
SUMO1-208ENST00000409627 COPRSQ9NQ92 184 aa20.69■□□□□ 0.9
SUMO1-208ENST00000409627 PCDHB15Q9Y5E8 787 aa20.69■□□□□ 0.9
SUMO1-208ENST00000409627 LTBP1Q14766 1721 aa20.68■□□□□ 0.9
SUMO1-208ENST00000409627 HMMRO75330 724 aa20.68■□□□□ 0.9
SUMO1-208ENST00000409627 SP8Q8IXZ3 490 aa20.68■□□□□ 0.9
SUMO1-208ENST00000409627 KLHDC4Q8TBB5 520 aa20.68■□□□□ 0.9
SUMO1-208ENST00000409627 FBXO3Q9UK99 471 aa20.68■□□□□ 0.9
SUMO1-208ENST00000409627 BCS1LQ9Y276 419 aa20.68■□□□□ 0.9
SUMO1-208ENST00000409627 ATP6V0A2Q9Y487 856 aa20.68■□□□□ 0.9
SUMO1-208ENST00000409627 FER1L6Q2WGJ9 1857 aa20.67■□□□□ 0.9
SUMO1-208ENST00000409627 CC2D2BQ6DHV5 1058 aa20.67■□□□□ 0.9
SUMO1-208ENST00000409627 LDHAL6AQ6ZMR3 332 aa20.67■□□□□ 0.9
SUMO1-208ENST00000409627 WWC3Q9ULE0 1092 aa20.67■□□□□ 0.9
SUMO1-208ENST00000409627 SOGA3Q5TF21 947 aa20.66■□□□□ 0.9
SUMO1-208ENST00000409627 PA2G4Q9UQ80 394 aaKnown RBP20.66■□□□□ 0.9
SUMO1-208ENST00000409627 SNED1Q8TER0 1413 aa20.66■□□□□ 0.9
SUMO1-208ENST00000409627 EYA2O00167 538 aa20.65■□□□□ 0.9
SUMO1-208ENST00000409627 C21orf2O43822 256 aa20.65■□□□□ 0.9
SUMO1-208ENST00000409627 CIAO1O76071 339 aa20.65■□□□□ 0.9
SUMO1-208ENST00000409627 TMX4Q9H1E5 349 aaPredicted RBP20.65■□□□□ 0.9
SUMO1-208ENST00000409627 CNNM1Q9NRU3 951 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms