RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 HOXB7P09629 217 aa13.56□□□□□ -0.24
SNX13-202ENST00000409604 PAXIP1Q6ZW49 1069 aaPredicted RBP13.56□□□□□ -0.24
SNX13-202ENST00000409604 CDK12Q9NYV4 1490 aaPredicted RBP13.56□□□□□ -0.24
SNX13-202ENST00000409604 DOK7Q18PE1 504 aa13.56□□□□□ -0.24
SNX13-202ENST00000409604 MAGEB6Q8N7X4 407 aa13.56□□□□□ -0.24
SNX13-202ENST00000409604 NBPF26B4DH59 902 aa13.55□□□□□ -0.24
SNX13-202ENST00000409604 NMIQ13287 307 aaPredicted RBP13.55□□□□□ -0.24
SNX13-202ENST00000409604 ERFEQ4G0M1 354 aa13.55□□□□□ -0.24
SNX13-202ENST00000409604 NBPF10Q6P3W6 841 aaKnown RBP13.55□□□□□ -0.24
SNX13-202ENST00000409604 PI16Q6UXB8 463 aa13.55□□□□□ -0.24
SNX13-202ENST00000409604 PTF1AQ7RTS3 328 aa13.55□□□□□ -0.24
SNX13-202ENST00000409604 NBPF15Q8N660 670 aa13.55□□□□□ -0.24
SNX13-202ENST00000409604 EVI5LQ96CN4 794 aa13.55□□□□□ -0.24
SNX13-202ENST00000409604 VAT1LQ9HCJ6 419 aa13.55□□□□□ -0.24
SNX13-202ENST00000409604 KIF3AQ9Y496 699 aa13.55□□□□□ -0.24
SNX13-202ENST00000409604 CDC42BPGQ6DT37 1551 aa13.55□□□□□ -0.24
SNX13-202ENST00000409604 IMMTQ16891 758 aaKnown RBP13.55□□□□□ -0.24
SNX13-202ENST00000409604 TRMT1LQ7Z2T5 733 aaKnown RBP13.55□□□□□ -0.24
SNX13-202ENST00000409604 BICD2Q8TD16 824 aa13.55□□□□□ -0.24
SNX13-202ENST00000409604 XAGE2Q96GT9 111 aa13.55□□□□□ -0.24
SNX13-202ENST00000409604 MYO3AQ8NEV4 1616 aa13.55□□□□□ -0.24
SNX13-202ENST00000409604 ZNF213O14771 459 aa13.55□□□□□ -0.24
SNX13-202ENST00000409604 RBM6P78332 1123 aaKnown RBP13.55□□□□□ -0.24
SNX13-202ENST00000409604 EPHA10Q5JZY3 1008 aa13.55□□□□□ -0.24
SNX13-202ENST00000409604 SMC5Q8IY18 1101 aa13.55□□□□□ -0.24
SNX13-202ENST00000409604 EAF2Q96CJ1 260 aaPredicted RBP13.55□□□□□ -0.24
SNX13-202ENST00000409604 CWC22Q9HCG8 908 aaKnown RBP13.55□□□□□ -0.24
SNX13-202ENST00000409604 PAG1Q9NWQ8 432 aa13.55□□□□□ -0.24
SNX13-202ENST00000409604 VWDEQ8N2E2 1590 aa13.55□□□□□ -0.24
SNX13-202ENST00000409604 RTL1A6NKG5 1358 aa13.55□□□□□ -0.24
SNX13-202ENST00000409604 GIGYF2Q6Y7W6 1299 aaKnown RBP13.54□□□□□ -0.24
SNX13-202ENST00000409604 TRMT2AQ8IZ69 625 aaKnown RBP13.54□□□□□ -0.24
SNX13-202ENST00000409604 FAM227BQ96M60 508 aa13.54□□□□□ -0.24
SNX13-202ENST00000409604 TLR7Q9NYK1 1049 aaKnown RBP13.54□□□□□ -0.24
SNX13-202ENST00000409604 MAP3K15Q6ZN16 1313 aa13.54□□□□□ -0.24
SNX13-202ENST00000409604 RPS8P62241 208 aaKnown RBP13.54□□□□□ -0.24
SNX13-202ENST00000409604 PRKG1Q13976 671 aa13.54□□□□□ -0.24
SNX13-202ENST00000409604 DRC7Q8IY82 874 aa13.54□□□□□ -0.24
SNX13-202ENST00000409604 TMOD2Q9NZR1 351 aa13.54□□□□□ -0.24
SNX13-202ENST00000409604 STX8Q9UNK0 236 aa13.54□□□□□ -0.24
SNX13-202ENST00000409604 HEG1Q9ULI3 1381 aa13.54□□□□□ -0.24
SNX13-202ENST00000409604 MMP10P09238 476 aa13.54□□□□□ -0.24
SNX13-202ENST00000409604 BMP2KLQ5H9B9 411 aa13.54□□□□□ -0.24
SNX13-202ENST00000409604 NECAB1Q8N987 351 aa13.54□□□□□ -0.24
SNX13-202ENST00000409604 CCDC69A6NI79 296 aa13.54□□□□□ -0.24
SNX13-202ENST00000409604 PRDM1O75626 825 aa13.54□□□□□ -0.24
SNX13-202ENST00000409604 TNNI3KQ59H18 835 aa13.54□□□□□ -0.24
SNX13-202ENST00000409604 SUSD4Q5VX71 490 aa13.54□□□□□ -0.24
SNX13-202ENST00000409604 FPGT-TNNI3KV9GXZ4 949 aa13.54□□□□□ -0.24
SNX13-202ENST00000409604 SLC3A2P08195 630 aaKnown RBP13.53□□□□□ -0.24
SNX13-202ENST00000409604 BCAMP50895 628 aa13.53□□□□□ -0.24
SNX13-202ENST00000409604 RABEP1Q15276 862 aa13.53□□□□□ -0.24
SNX13-202ENST00000409604 NAA16Q6N069 864 aaPredicted RBP13.53□□□□□ -0.24
SNX13-202ENST00000409604 BABAM1Q9NWV8 329 aa13.53□□□□□ -0.24
SNX13-202ENST00000409604 TECPR2O15040 1411 aa13.53□□□□□ -0.24
SNX13-202ENST00000409604 RXRAP19793 462 aa13.53□□□□□ -0.24
SNX13-202ENST00000409604 PARP10Q53GL7 1025 aa13.53□□□□□ -0.24
SNX13-202ENST00000409604 MYO5BQ9ULV0 1848 aa13.53□□□□□ -0.24
SNX13-202ENST00000409604 IGKV5-2P06315 115 aa13.53□□□□□ -0.24
SNX13-202ENST00000409604 ADORA1P30542 326 aa13.53□□□□□ -0.24
SNX13-202ENST00000409604 MICU3Q86XE3 530 aa13.53□□□□□ -0.24
SNX13-202ENST00000409604 ZKSCAN3Q9BRR0 538 aa13.53□□□□□ -0.24
SNX13-202ENST00000409604 MST1RQ04912 1400 aa13.52□□□□□ -0.24
SNX13-202ENST00000409604 H0YIN7 160 aa13.52□□□□□ -0.24
SNX13-202ENST00000409604 SERPINB2P05120 415 aa13.52□□□□□ -0.24
SNX13-202ENST00000409604 TXNRD1Q16881 649 aa13.52□□□□□ -0.24
SNX13-202ENST00000409604 SLC4A4Q9Y6R1 1079 aa13.52□□□□□ -0.24
SNX13-202ENST00000409604 SPATA31A1Q5TZJ5 1347 aa13.52□□□□□ -0.24
SNX13-202ENST00000409604 ZAP70P43403 619 aa13.52□□□□□ -0.25
SNX13-202ENST00000409604 SEC62Q99442 399 aaKnown RBP13.52□□□□□ -0.25
SNX13-202ENST00000409604 CHMP5Q9NZZ3 219 aa13.52□□□□□ -0.25
SNX13-202ENST00000409604 CLEC11AQ9Y240 323 aa13.52□□□□□ -0.25
SNX13-202ENST00000409604 USP31Q70CQ4 1352 aa13.52□□□□□ -0.25
SNX13-202ENST00000409604 PES1O00541 588 aaKnown RBP13.52□□□□□ -0.25
SNX13-202ENST00000409604 SAP30BPQ9UHR5 308 aaKnown RBP13.52□□□□□ -0.25
SNX13-202ENST00000409604 SETBP1Q9Y6X0 1596 aa13.51□□□□□ -0.25
SNX13-202ENST00000409604 IL6STP40189 918 aaPredicted RBP13.51□□□□□ -0.25
SNX13-202ENST00000409604 CTSWP56202 376 aa13.51□□□□□ -0.25
SNX13-202ENST00000409604 WDR78Q5VTH9 848 aa13.51□□□□□ -0.25
SNX13-202ENST00000409604 ARHGEF1Q92888 912 aaKnown RBP13.51□□□□□ -0.25
SNX13-202ENST00000409604 OVOS2A0A0J9YW53 1432 aa13.51□□□□□ -0.25
SNX13-202ENST00000409604 OVOS2Q6IE36 1432 aa13.51□□□□□ -0.25
SNX13-202ENST00000409604 SLFNL1Q499Z3 407 aa13.51□□□□□ -0.25
SNX13-202ENST00000409604 DPP8Q6V1X1 898 aaPredicted RBP13.51□□□□□ -0.25
SNX13-202ENST00000409604 NLRP10Q86W26 655 aa13.51□□□□□ -0.25
SNX13-202ENST00000409604 IFIT3O14879 490 aaKnown RBP13.51□□□□□ -0.25
SNX13-202ENST00000409604 U3KPZ7 1027 aaPredicted RBP13.51□□□□□ -0.25
SNX13-202ENST00000409604 ABCC4O15439 1325 aa13.51□□□□□ -0.25
SNX13-202ENST00000409604 KIF13AQ9H1H9 1805 aa13.5□□□□□ -0.25
SNX13-202ENST00000409604 LARP1BQ659C4 914 aaKnown RBP13.5□□□□□ -0.25
SNX13-202ENST00000409604 SIRT2Q8IXJ6 389 aa13.5□□□□□ -0.25
SNX13-202ENST00000409604 ZBTB38Q8NAP3 1195 aaPredicted RBP13.5□□□□□ -0.25
SNX13-202ENST00000409604 CTNNA3Q9UI47 895 aa13.5□□□□□ -0.25
SNX13-202ENST00000409604 PNPLA6Q8IY17 1366 aa13.5□□□□□ -0.25
SNX13-202ENST00000409604 CRB1P82279 1406 aa13.5□□□□□ -0.25
SNX13-202ENST00000409604 TCP10Q12799 353 aa13.5□□□□□ -0.25
SNX13-202ENST00000409604 JDP2Q8WYK2 163 aa13.5□□□□□ -0.25
SNX13-202ENST00000409604 RBM8AQ9Y5S9 174 aaKnown RBP13.5□□□□□ -0.25
SNX13-202ENST00000409604 PRPF40AO75400 957 aaKnown RBP13.5□□□□□ -0.25
SNX13-202ENST00000409604 LARGE2Q8N3Y3 721 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms