RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 CTSWP56202 376 aa18.66■□□□□ 0.58
SUMO1-207ENST00000409498 PRPF40BQ6NWY9 871 aaKnown RBP18.66■□□□□ 0.58
SUMO1-207ENST00000409498 BBOX1O75936 387 aa18.65■□□□□ 0.58
SUMO1-207ENST00000409498 FOXO4P98177 505 aa18.65■□□□□ 0.58
SUMO1-207ENST00000409498 CCDC152Q4G0S7 254 aa18.65■□□□□ 0.58
SUMO1-207ENST00000409498 DDX46Q7L014 1031 aaKnown RBP18.65■□□□□ 0.58
SUMO1-207ENST00000409498 TNNQ9UQP3 1299 aa18.65■□□□□ 0.58
SUMO1-207ENST00000409498 GRAPQ13588 217 aa18.64■□□□□ 0.57
SUMO1-207ENST00000409498 SOGA3Q5TF21 947 aa18.64■□□□□ 0.57
SUMO1-207ENST00000409498 GRAPLQ8TC17 118 aaPredicted RBP18.64■□□□□ 0.57
SUMO1-207ENST00000409498 KAZALD1Q96I82 304 aa18.64■□□□□ 0.57
SUMO1-207ENST00000409498 CACNA1SQ13698 1873 aa18.64■□□□□ 0.57
SUMO1-207ENST00000409498 MS4A1P11836 297 aa18.63■□□□□ 0.57
SUMO1-207ENST00000409498 CC2D2BQ6DHV5 1058 aa18.63■□□□□ 0.57
SUMO1-207ENST00000409498 TMC4Q7Z404 712 aa18.63■□□□□ 0.57
SUMO1-207ENST00000409498 DZIP1LQ8IYY4 767 aaKnown RBP18.63■□□□□ 0.57
SUMO1-207ENST00000409498 PELP1Q8IZL8 1130 aaKnown RBP18.63■□□□□ 0.57
SUMO1-207ENST00000409498 WWC3Q9ULE0 1092 aa18.63■□□□□ 0.57
SUMO1-207ENST00000409498 SNED1Q8TER0 1413 aa18.63■□□□□ 0.57
SUMO1-207ENST00000409498 RABL6Q3YEC7 729 aaPredicted RBP18.62■□□□□ 0.57
SUMO1-207ENST00000409498 GRIPAP1Q4V328 841 aa18.62■□□□□ 0.57
SUMO1-207ENST00000409498 TAF1P21675 1872 aa18.61■□□□□ 0.57
SUMO1-207ENST00000409498 FER1L6Q2WGJ9 1857 aa18.61■□□□□ 0.57
SUMO1-207ENST00000409498 C21orf2O43822 256 aa18.61■□□□□ 0.57
SUMO1-207ENST00000409498 EPHA10Q5JZY3 1008 aa18.61■□□□□ 0.57
SUMO1-207ENST00000409498 SP8Q8IXZ3 490 aa18.61■□□□□ 0.57
SUMO1-207ENST00000409498 TMEM57Q8N5G2 664 aa18.61■□□□□ 0.57
SUMO1-207ENST00000409498 CELF1Q92879 486 aaKnown RBP18.61■□□□□ 0.57
SUMO1-207ENST00000409498 CLUAP1Q96AJ1 413 aa18.61■□□□□ 0.57
SUMO1-207ENST00000409498 SUCLG2Q96I99 432 aa18.61■□□□□ 0.57
SUMO1-207ENST00000409498 HDAC5Q9UQL6 1122 aa18.61■□□□□ 0.57
SUMO1-207ENST00000409498 ATP6V0A2Q9Y487 856 aa18.61■□□□□ 0.57
SUMO1-207ENST00000409498 LTBP3Q9NS15 1303 aa18.6■□□□□ 0.57
SUMO1-207ENST00000409498 PPEF1O14829 653 aaPredicted RBP18.6■□□□□ 0.57
SUMO1-207ENST00000409498 RLBP1P12271 317 aa18.6■□□□□ 0.57
SUMO1-207ENST00000409498 RPS8P62241 208 aaKnown RBP18.6■□□□□ 0.57
SUMO1-207ENST00000409498 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.6■□□□□ 0.57
SUMO1-207ENST00000409498 GREM2Q9H772 168 aa18.6■□□□□ 0.57
SUMO1-207ENST00000409498 SEC31BQ9NQW1 1179 aa18.6■□□□□ 0.57
SUMO1-207ENST00000409498 COL4A1P02462 1669 aa18.6■□□□□ 0.57
SUMO1-207ENST00000409498 PDE3AQ14432 1141 aa18.59■□□□□ 0.57
SUMO1-207ENST00000409498 CCDC93Q567U6 631 aa18.59■□□□□ 0.57
SUMO1-207ENST00000409498 FTSJ3Q8IY81 847 aaKnown RBP18.59■□□□□ 0.57
SUMO1-207ENST00000409498 LRRC37AA6NMS7 1700 aa18.59■□□□□ 0.57
SUMO1-207ENST00000409498 GNAI3P08754 354 aa18.58■□□□□ 0.56
SUMO1-207ENST00000409498 UBTFL1P0CB47 393 aaPredicted RBP18.58■□□□□ 0.56
SUMO1-207ENST00000409498 LMBR1LQ6UX01 489 aa18.58■□□□□ 0.56
SUMO1-207ENST00000409498 RTKN2Q8IZC4 609 aa18.58■□□□□ 0.56
SUMO1-207ENST00000409498 ANKRD44Q8N8A2 993 aa18.58■□□□□ 0.56
SUMO1-207ENST00000409498 CDC5LQ99459 802 aaKnown RBP18.58■□□□□ 0.56
SUMO1-207ENST00000409498 MEIS3Q99687 375 aa18.58■□□□□ 0.56
SUMO1-207ENST00000409498 CHD4Q14839 1912 aa18.58■□□□□ 0.56
SUMO1-207ENST00000409498 NFKBIEO00221 500 aa18.57■□□□□ 0.56
SUMO1-207ENST00000409498 ZBTB7BO15156 539 aaPredicted RBP18.57■□□□□ 0.56
SUMO1-207ENST00000409498 ITGA6P23229 1130 aa18.57■□□□□ 0.56
SUMO1-207ENST00000409498 ARHGAP27Q6ZUM4 889 aa18.57■□□□□ 0.56
SUMO1-207ENST00000409498 BICC1Q9H694 974 aaKnown RBP18.57■□□□□ 0.56
SUMO1-207ENST00000409498 SBF1O95248 1867 aa18.56■□□□□ 0.56
SUMO1-207ENST00000409498 GOLGB1Q14789 3259 aaKnown RBP18.56■□□□□ 0.56
SUMO1-207ENST00000409498 FAM161AQ3B820 660 aa18.56■□□□□ 0.56
SUMO1-207ENST00000409498 ANKRD18AQ8IVF6 992 aa18.56■□□□□ 0.56
SUMO1-207ENST00000409498 CCDC85AQ96PX6 553 aaPredicted RBP18.56■□□□□ 0.56
SUMO1-207ENST00000409498 PSMD1Q99460 953 aa18.56■□□□□ 0.56
SUMO1-207ENST00000409498 BSDC1Q9NW68 430 aaPredicted RBP18.56■□□□□ 0.56
SUMO1-207ENST00000409498 ANKRD18BA2A2Z9 1011 aa18.55■□□□□ 0.56
SUMO1-207ENST00000409498 PLIN1O60240 522 aa18.55■□□□□ 0.56
SUMO1-207ENST00000409498 OLFM4Q6UX06 510 aa18.55■□□□□ 0.56
SUMO1-207ENST00000409498 PANK1Q8TE04 598 aa18.55■□□□□ 0.56
SUMO1-207ENST00000409498 RTFDC1Q9BY42 306 aaPredicted RBP18.55■□□□□ 0.56
SUMO1-207ENST00000409498 ZNF219Q9P2Y4 722 aaPredicted RBP18.55■□□□□ 0.56
SUMO1-207ENST00000409498 UTRNP46939 3433 aa18.54■□□□□ 0.56
SUMO1-207ENST00000409498 FKBP4Q02790 459 aaKnown RBP eCLIP18.54■□□□□ 0.56
SUMO1-207ENST00000409498 IFIT5Q13325 482 aaKnown RBP18.54■□□□□ 0.56
SUMO1-207ENST00000409498 TMX4Q9H1E5 349 aaPredicted RBP18.54■□□□□ 0.56
SUMO1-207ENST00000409498 MTX1Q13505 466 aa18.53■□□□□ 0.56
SUMO1-207ENST00000409498 MVPQ14764 893 aaKnown RBP18.53■□□□□ 0.56
SUMO1-207ENST00000409498 LTBP1Q14766 1721 aa18.53■□□□□ 0.56
SUMO1-207ENST00000409498 CCDC57Q2TAC2 916 aa18.53■□□□□ 0.56
SUMO1-207ENST00000409498 ITPRIPQ8IWB1 547 aa18.53■□□□□ 0.56
SUMO1-207ENST00000409498 VPS33BQ9H267 617 aa18.53■□□□□ 0.56
SUMO1-207ENST00000409498 TAOK3Q9H2K8 898 aa18.53■□□□□ 0.56
SUMO1-207ENST00000409498 PODXL2Q9NZ53 605 aa18.53■□□□□ 0.56
SUMO1-207ENST00000409498 LRRFIP2Q9Y608 721 aaKnown RBP18.53■□□□□ 0.56
SUMO1-207ENST00000409498 GNAI2P04899 355 aa18.52■□□□□ 0.56
SUMO1-207ENST00000409498 IGHMBP2P38935 993 aaKnown RBP18.52■□□□□ 0.56
SUMO1-207ENST00000409498 PRELPP51888 382 aa18.52■□□□□ 0.56
SUMO1-207ENST00000409498 RRP1P56182 461 aaKnown RBP18.52■□□□□ 0.56
SUMO1-207ENST00000409498 DDX19BQ9UMR2 479 aa18.52■□□□□ 0.56
SUMO1-207ENST00000409498 LMNB1P20700 586 aa18.51■□□□□ 0.55
SUMO1-207ENST00000409498 RFX5P48382 616 aaPredicted RBP18.51■□□□□ 0.55
SUMO1-207ENST00000409498 RASSF7Q02833 373 aa18.51■□□□□ 0.55
SUMO1-207ENST00000409498 SLC51AQ86UW1 340 aa18.51■□□□□ 0.55
SUMO1-207ENST00000409498 MPNDQ8N594 471 aa18.51■□□□□ 0.55
SUMO1-207ENST00000409498 DICER1Q9UPY3 1922 aaKnown RBP18.51■□□□□ 0.55
SUMO1-207ENST00000409498 SUPT20HQ8NEM7 779 aa18.5■□□□□ 0.55
SUMO1-207ENST00000409498 MPHOSPH8Q99549 860 aa18.5■□□□□ 0.55
SUMO1-207ENST00000409498 CHMP4BQ9H444 224 aaKnown RBP18.5■□□□□ 0.55
SUMO1-207ENST00000409498 MINPP1Q9UNW1 487 aa18.5■□□□□ 0.55
SUMO1-207ENST00000409498 CHMP3Q9Y3E7 222 aa18.5■□□□□ 0.55
SUMO1-207ENST00000409498 DUOX1Q9NRD9 1551 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms