RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 IFIT5Q13325 482 aaKnown RBP19.01■□□□□ 0.63
AP1S3-204ENST00000409375 SF3B3Q15393 1217 aaKnown RBP19.01■□□□□ 0.63
AP1S3-204ENST00000409375 CCDC57Q2TAC2 916 aa19.01■□□□□ 0.63
AP1S3-204ENST00000409375 EPHA10Q5JZY3 1008 aa19.01■□□□□ 0.63
AP1S3-204ENST00000409375 TTLL11Q8NHH1 800 aa19.01■□□□□ 0.63
AP1S3-204ENST00000409375 SPON1Q9HCB6 807 aa19.01■□□□□ 0.63
AP1S3-204ENST00000409375 HDAC1Q13547 482 aaPredicted RBP19■□□□□ 0.63
AP1S3-204ENST00000409375 RTL9Q8NET4 1388 aa19■□□□□ 0.63
AP1S3-204ENST00000409375 ANKRD18BA2A2Z9 1011 aa18.99■□□□□ 0.63
AP1S3-204ENST00000409375 TAF7LQ5H9L4 462 aa18.99■□□□□ 0.63
AP1S3-204ENST00000409375 SSH3Q8TE77 659 aa18.99■□□□□ 0.63
AP1S3-204ENST00000409375 RPGRQ92834 1020 aaKnown RBP18.99■□□□□ 0.63
AP1S3-204ENST00000409375 POLA2Q14181 598 aa18.98■□□□□ 0.63
AP1S3-204ENST00000409375 HSP90AB4PQ58FF6 505 aa18.98■□□□□ 0.63
AP1S3-204ENST00000409375 DDX46Q7L014 1031 aaKnown RBP18.98■□□□□ 0.63
AP1S3-204ENST00000409375 CCDC24Q8N4L8 307 aa18.98■□□□□ 0.63
AP1S3-204ENST00000409375 CDC5LQ99459 802 aaKnown RBP18.98■□□□□ 0.63
AP1S3-204ENST00000409375 PNMA6EA0A0J9YXQ4 647 aa18.97■□□□□ 0.63
AP1S3-204ENST00000409375 ITGA6P23229 1130 aa18.97■□□□□ 0.63
AP1S3-204ENST00000409375 FAM161AQ3B820 660 aa18.97■□□□□ 0.63
AP1S3-204ENST00000409375 C10orf71Q711Q0 1435 aa18.97■□□□□ 0.63
AP1S3-204ENST00000409375 TNRC6CQ9HCJ0 1690 aaKnown RBP18.96■□□□□ 0.63
AP1S3-204ENST00000409375 KLRG2A4D1S0 409 aaPredicted RBP18.96■□□□□ 0.63
AP1S3-204ENST00000409375 CRY2Q49AN0 593 aa18.96■□□□□ 0.63
AP1S3-204ENST00000409375 RBM17Q96I25 401 aaKnown RBP18.96■□□□□ 0.63
AP1S3-204ENST00000409375 CCDC85AQ96PX6 553 aaPredicted RBP18.96■□□□□ 0.63
AP1S3-204ENST00000409375 GREM2Q9H772 168 aa18.96■□□□□ 0.63
AP1S3-204ENST00000409375 FBXO3Q9UK99 471 aa18.96■□□□□ 0.63
AP1S3-204ENST00000409375 ANKRD31Q8N7Z5 1873 aa18.95■□□□□ 0.62
AP1S3-204ENST00000409375 H0YIN7 160 aa18.95■□□□□ 0.62
AP1S3-204ENST00000409375 IGHMBP2P38935 993 aaKnown RBP18.95■□□□□ 0.62
AP1S3-204ENST00000409375 SIRT2Q8IXJ6 389 aa18.95■□□□□ 0.62
AP1S3-204ENST00000409375 GCC1Q96CN9 775 aa18.95■□□□□ 0.62
AP1S3-204ENST00000409375 COPRSQ9NQ92 184 aa18.95■□□□□ 0.62
AP1S3-204ENST00000409375 ZBTB47Q9UFB7 747 aaPredicted RBP18.95■□□□□ 0.62
AP1S3-204ENST00000409375 NPR1P16066 1061 aa18.94■□□□□ 0.62
AP1S3-204ENST00000409375 G3BP1Q13283 466 aaKnown RBP eCLIP18.94■□□□□ 0.62
AP1S3-204ENST00000409375 OS9Q13438 667 aaPredicted RBP18.94■□□□□ 0.62
AP1S3-204ENST00000409375 CENPQQ7L2Z9 268 aaPredicted RBP18.94■□□□□ 0.62
AP1S3-204ENST00000409375 SGIP1Q9BQI5 828 aa18.94■□□□□ 0.62
AP1S3-204ENST00000409375 KDM2BQ8NHM5 1336 aa18.94■□□□□ 0.62
AP1S3-204ENST00000409375 KIF13BQ9NQT8 1826 aa18.93■□□□□ 0.62
AP1S3-204ENST00000409375 SURF6O75683 361 aaKnown RBP18.93■□□□□ 0.62
AP1S3-204ENST00000409375 ALDH1B1P30837 517 aa18.93■□□□□ 0.62
AP1S3-204ENST00000409375 PTGER2P43116 358 aa18.93■□□□□ 0.62
AP1S3-204ENST00000409375 ERC1Q8IUD2 1116 aa18.93■□□□□ 0.62
AP1S3-204ENST00000409375 ANKRD18AQ8IVF6 992 aa18.93■□□□□ 0.62
AP1S3-204ENST00000409375 MPHOSPH8Q99549 860 aa18.93■□□□□ 0.62
AP1S3-204ENST00000409375 RAB11FIP3O75154 756 aa18.92■□□□□ 0.62
AP1S3-204ENST00000409375 HOXA10P31260 410 aaPredicted RBP18.92■□□□□ 0.62
AP1S3-204ENST00000409375 RFX5P48382 616 aaPredicted RBP18.92■□□□□ 0.62
AP1S3-204ENST00000409375 TGFB2P61812 414 aa18.92■□□□□ 0.62
AP1S3-204ENST00000409375 PTPN12Q05209 780 aaKnown RBP18.92■□□□□ 0.62
AP1S3-204ENST00000409375 C3orf67Q6ZVT6 689 aa18.92■□□□□ 0.62
AP1S3-204ENST00000409375 C2CD5Q86YS7 1000 aa18.92■□□□□ 0.62
AP1S3-204ENST00000409375 MASTLQ96GX5 879 aa18.92■□□□□ 0.62
AP1S3-204ENST00000409375 CRAMP1Q96RY5 1269 aa18.92■□□□□ 0.62
AP1S3-204ENST00000409375 DCTPP1Q9H773 170 aa18.92■□□□□ 0.62
AP1S3-204ENST00000409375 NOP58Q9Y2X3 529 aaKnown RBP18.92■□□□□ 0.62
AP1S3-204ENST00000409375 CD2APQ9Y5K6 639 aa18.92■□□□□ 0.62
AP1S3-204ENST00000409375 SRGNP10124 158 aa18.91■□□□□ 0.62
AP1S3-204ENST00000409375 GRAPQ13588 217 aa18.91■□□□□ 0.62
AP1S3-204ENST00000409375 STYK1Q6J9G0 422 aa18.91■□□□□ 0.62
AP1S3-204ENST00000409375 B4GALNT3Q6L9W6 998 aa18.91■□□□□ 0.62
AP1S3-204ENST00000409375 LDHAL6AQ6ZMR3 332 aa18.91■□□□□ 0.62
AP1S3-204ENST00000409375 TMC4Q7Z404 712 aa18.91■□□□□ 0.62
AP1S3-204ENST00000409375 GRAPLQ8TC17 118 aaPredicted RBP18.91■□□□□ 0.62
AP1S3-204ENST00000409375 CNNM1Q9NRU3 951 aa18.91■□□□□ 0.62
AP1S3-204ENST00000409375 EYA2O00167 538 aa18.9■□□□□ 0.62
AP1S3-204ENST00000409375 CIAO1O76071 339 aa18.9■□□□□ 0.62
AP1S3-204ENST00000409375 RPS8P62241 208 aaKnown RBP18.9■□□□□ 0.62
AP1S3-204ENST00000409375 TMX4Q9H1E5 349 aaPredicted RBP18.9■□□□□ 0.62
AP1S3-204ENST00000409375 SEC31BQ9NQW1 1179 aa18.9■□□□□ 0.62
AP1S3-204ENST00000409375 PPP1R1BQ9UD71 204 aaPredicted RBP18.9■□□□□ 0.62
AP1S3-204ENST00000409375 BBOX1O75936 387 aa18.89■□□□□ 0.61
AP1S3-204ENST00000409375 IGHDP01880 384 aa18.89■□□□□ 0.61
AP1S3-204ENST00000409375 IL15P40933 162 aaPredicted RBP18.89■□□□□ 0.61
AP1S3-204ENST00000409375 SMC5Q8IY18 1101 aa18.89■□□□□ 0.61
AP1S3-204ENST00000409375 CNKSR1Q969H4 720 aa18.89■□□□□ 0.61
AP1S3-204ENST00000409375 SIL1Q9H173 461 aa18.89■□□□□ 0.61
AP1S3-204ENST00000409375 PA2G4Q9UQ80 394 aaKnown RBP18.89■□□□□ 0.61
AP1S3-204ENST00000409375 EXOC6BQ9Y2D4 811 aa18.89■□□□□ 0.61
AP1S3-204ENST00000409375 KLHL34Q8N239 644 aa18.88■□□□□ 0.61
AP1S3-204ENST00000409375 ZNF622Q969S3 477 aaKnown RBP eCLIP18.88■□□□□ 0.61
AP1S3-204ENST00000409375 KIF1BPQ96EK5 621 aa18.88■□□□□ 0.61
AP1S3-204ENST00000409375 ZNF594Q96JF6 807 aaPredicted RBP18.88■□□□□ 0.61
AP1S3-204ENST00000409375 BSDC1Q9NW68 430 aaPredicted RBP18.88■□□□□ 0.61
AP1S3-204ENST00000409375 LRP5O75197 1615 aa18.88■□□□□ 0.61
AP1S3-204ENST00000409375 COL11A2P13942 1736 aaPredicted RBP18.88■□□□□ 0.61
AP1S3-204ENST00000409375 MROH5Q6ZUA9 1318 aa18.87■□□□□ 0.61
AP1S3-204ENST00000409375 KLHDC4Q8TBB5 520 aa18.87■□□□□ 0.61
AP1S3-204ENST00000409375 LRRCC1Q9C099 1032 aa18.87■□□□□ 0.61
AP1S3-204ENST00000409375 DLEC1Q9Y238 1755 aa18.87■□□□□ 0.61
AP1S3-204ENST00000409375 SPEF2Q9C093 1822 aa18.86■□□□□ 0.61
AP1S3-204ENST00000409375 CELF1Q92879 486 aaKnown RBP18.86■□□□□ 0.61
AP1S3-204ENST00000409375 CEP126Q9P2H0 1117 aa18.86■□□□□ 0.61
AP1S3-204ENST00000409375 PPEF1O14829 653 aaPredicted RBP18.85■□□□□ 0.61
AP1S3-204ENST00000409375 CHRNA5P30532 468 aa18.85■□□□□ 0.61
AP1S3-204ENST00000409375 APBB1O00213 710 aa18.84■□□□□ 0.61
AP1S3-204ENST00000409375 METTL24Q5JXM2 366 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms