RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 CACNA1SQ13698 1873 aa17.65■□□□□ 0.42
CHRNA1-204ENST00000409323 SLC51AQ86UW1 340 aa17.65■□□□□ 0.42
CHRNA1-204ENST00000409323 KLHDC4Q8TBB5 520 aa17.65■□□□□ 0.42
CHRNA1-204ENST00000409323 BRIP1Q9BX63 1249 aa17.65■□□□□ 0.42
CHRNA1-204ENST00000409323 PLA2G12BQ9BX93 195 aa17.65■□□□□ 0.42
CHRNA1-204ENST00000409323 SPEF2Q9C093 1822 aa17.64■□□□□ 0.41
CHRNA1-204ENST00000409323 CEP85Q6P2H3 762 aa17.64■□□□□ 0.41
CHRNA1-204ENST00000409323 A0A0G2JLW4 131 aa17.63■□□□□ 0.41
CHRNA1-204ENST00000409323 C2CD5Q86YS7 1000 aa17.63■□□□□ 0.41
CHRNA1-204ENST00000409323 SIRT2Q8IXJ6 389 aa17.63■□□□□ 0.41
CHRNA1-204ENST00000409323 ZNF594Q96JF6 807 aaPredicted RBP17.63■□□□□ 0.41
CHRNA1-204ENST00000409323 SRGAP3O43295 1099 aa17.62■□□□□ 0.41
CHRNA1-204ENST00000409323 NLGN2Q8NFZ4 835 aa17.62■□□□□ 0.41
CHRNA1-204ENST00000409323 CHMP4BQ9H444 224 aaKnown RBP17.62■□□□□ 0.41
CHRNA1-204ENST00000409323 PA2G4Q9UQ80 394 aaKnown RBP17.62■□□□□ 0.41
CHRNA1-204ENST00000409323 KIF13BQ9NQT8 1826 aa17.62■□□□□ 0.41
CHRNA1-204ENST00000409323 CSF1RP07333 972 aa17.62■□□□□ 0.41
CHRNA1-204ENST00000409323 DPEP1P16444 411 aa17.62■□□□□ 0.41
CHRNA1-204ENST00000409323 ITGA6P23229 1130 aa17.62■□□□□ 0.41
CHRNA1-204ENST00000409323 PDE6BP35913 854 aa17.62■□□□□ 0.41
CHRNA1-204ENST00000409323 RABL6Q3YEC7 729 aaPredicted RBP17.62■□□□□ 0.41
CHRNA1-204ENST00000409323 CCDC152Q4G0S7 254 aa17.62■□□□□ 0.41
CHRNA1-204ENST00000409323 RPGRQ92834 1020 aaKnown RBP17.62■□□□□ 0.41
CHRNA1-204ENST00000409323 ZNF622Q969S3 477 aaKnown RBP eCLIP17.62■□□□□ 0.41
CHRNA1-204ENST00000409323 FHDC1Q9C0D6 1143 aaPredicted RBP17.62■□□□□ 0.41
CHRNA1-204ENST00000409323 SF3B3Q15393 1217 aaKnown RBP17.61■□□□□ 0.41
CHRNA1-204ENST00000409323 SRCAPQ6ZRS2 3230 aa17.61■□□□□ 0.41
CHRNA1-204ENST00000409323 SRGNP10124 158 aa17.6■□□□□ 0.41
CHRNA1-204ENST00000409323 ATP8B2P98198 1209 aa17.6■□□□□ 0.41
CHRNA1-204ENST00000409323 CELF1Q92879 486 aaKnown RBP17.6■□□□□ 0.41
CHRNA1-204ENST00000409323 SIL1Q9H173 461 aa17.6■□□□□ 0.41
CHRNA1-204ENST00000409323 HDAC5Q9UQL6 1122 aa17.6■□□□□ 0.41
CHRNA1-204ENST00000409323 KIAA1551Q9HCM1 1747 aa17.6■□□□□ 0.41
CHRNA1-204ENST00000409323 RIC1Q4ADV7 1423 aa17.59■□□□□ 0.41
CHRNA1-204ENST00000409323 H0YIN7 160 aa17.59■□□□□ 0.41
CHRNA1-204ENST00000409323 HSP90B1P14625 803 aaKnown RBP17.59■□□□□ 0.41
CHRNA1-204ENST00000409323 IFIT5Q13325 482 aaKnown RBP17.59■□□□□ 0.41
CHRNA1-204ENST00000409323 CCDC57Q2TAC2 916 aa17.59■□□□□ 0.41
CHRNA1-204ENST00000409323 CRY2Q49AN0 593 aa17.59■□□□□ 0.41
CHRNA1-204ENST00000409323 BCL11AQ9H165 835 aa17.59■□□□□ 0.41
CHRNA1-204ENST00000409323 ZNF219Q9P2Y4 722 aaPredicted RBP17.59■□□□□ 0.41
CHRNA1-204ENST00000409323 ANKRD18BA2A2Z9 1011 aa17.58■□□□□ 0.41
CHRNA1-204ENST00000409323 TAF7LQ5H9L4 462 aa17.58■□□□□ 0.41
CHRNA1-204ENST00000409323 DDX46Q7L014 1031 aaKnown RBP17.58■□□□□ 0.41
CHRNA1-204ENST00000409323 KLRG2A4D1S0 409 aaPredicted RBP17.57■□□□□ 0.4
CHRNA1-204ENST00000409323 RFX5P48382 616 aaPredicted RBP17.57■□□□□ 0.4
CHRNA1-204ENST00000409323 PUS3Q9BZE2 481 aaKnown RBP17.57■□□□□ 0.4
CHRNA1-204ENST00000409323 APBB1O00213 710 aa17.57■□□□□ 0.4
CHRNA1-204ENST00000409323 IGHDP01880 384 aa17.57■□□□□ 0.4
CHRNA1-204ENST00000409323 KCNA3P22001 575 aa17.57■□□□□ 0.4
CHRNA1-204ENST00000409323 MTX1Q13505 466 aa17.57■□□□□ 0.4
CHRNA1-204ENST00000409323 OLFM4Q6UX06 510 aa17.57■□□□□ 0.4
CHRNA1-204ENST00000409323 MASTLQ96GX5 879 aa17.57■□□□□ 0.4
CHRNA1-204ENST00000409323 RBM17Q96I25 401 aaKnown RBP17.57■□□□□ 0.4
CHRNA1-204ENST00000409323 SLX4Q8IY92 1834 aa17.56■□□□□ 0.4
CHRNA1-204ENST00000409323 NPR1P16066 1061 aa17.56■□□□□ 0.4
CHRNA1-204ENST00000409323 PTPN12Q05209 780 aaKnown RBP17.56■□□□□ 0.4
CHRNA1-204ENST00000409323 POLA2Q14181 598 aa17.56■□□□□ 0.4
CHRNA1-204ENST00000409323 LRRC24Q50LG9 513 aa17.56■□□□□ 0.4
CHRNA1-204ENST00000409323 RPAP2Q8IXW5 612 aaPredicted RBP17.56■□□□□ 0.4
CHRNA1-204ENST00000409323 SSH3Q8TE77 659 aa17.56■□□□□ 0.4
CHRNA1-204ENST00000409323 EXOC6BQ9Y2D4 811 aa17.56■□□□□ 0.4
CHRNA1-204ENST00000409323 CD2APQ9Y5K6 639 aa17.56■□□□□ 0.4
CHRNA1-204ENST00000409323 DLEC1Q9Y238 1755 aa17.56■□□□□ 0.4
CHRNA1-204ENST00000409323 B4GALNT3Q6L9W6 998 aa17.55■□□□□ 0.4
CHRNA1-204ENST00000409323 ANKRD18AQ8IVF6 992 aa17.55■□□□□ 0.4
CHRNA1-204ENST00000409323 GRAPQ13588 217 aa17.54■□□□□ 0.4
CHRNA1-204ENST00000409323 GRAPLQ8TC17 118 aaPredicted RBP17.54■□□□□ 0.4
CHRNA1-204ENST00000409323 SYT17Q9BSW7 474 aa17.54■□□□□ 0.4
CHRNA1-204ENST00000409323 RTL9Q8NET4 1388 aa17.54■□□□□ 0.4
CHRNA1-204ENST00000409323 SURF6O75683 361 aaKnown RBP17.53■□□□□ 0.4
CHRNA1-204ENST00000409323 HOXA10P31260 410 aaPredicted RBP17.53■□□□□ 0.4
CHRNA1-204ENST00000409323 TGFB2P61812 414 aa17.53■□□□□ 0.4
CHRNA1-204ENST00000409323 RPS8P62241 208 aaKnown RBP17.53■□□□□ 0.4
CHRNA1-204ENST00000409323 ERICH6BQ5W0A0 696 aa17.53■□□□□ 0.4
CHRNA1-204ENST00000409323 PRPF40BQ6NWY9 871 aaKnown RBP17.53■□□□□ 0.4
CHRNA1-204ENST00000409323 CDC5LQ99459 802 aaKnown RBP17.53■□□□□ 0.4
CHRNA1-204ENST00000409323 LRP5O75197 1615 aa17.53■□□□□ 0.4
CHRNA1-204ENST00000409323 BRCA1P38398 1863 aaKnown RBP17.53■□□□□ 0.4
CHRNA1-204ENST00000409323 HMMRO75330 724 aa17.53■□□□□ 0.4
CHRNA1-204ENST00000409323 IGHMBP2P38935 993 aaKnown RBP17.53■□□□□ 0.4
CHRNA1-204ENST00000409323 STYK1Q6J9G0 422 aa17.53■□□□□ 0.4
CHRNA1-204ENST00000409323 LDHAL6AQ6ZMR3 332 aa17.53■□□□□ 0.4
CHRNA1-204ENST00000409323 HELBQ8NG08 1087 aaPredicted RBP17.53■□□□□ 0.4
CHRNA1-204ENST00000409323 CRAMP1Q96RY5 1269 aa17.53■□□□□ 0.4
CHRNA1-204ENST00000409323 MPHOSPH8Q99549 860 aa17.53■□□□□ 0.4
CHRNA1-204ENST00000409323 CNNM1Q9NRU3 951 aa17.53■□□□□ 0.4
CHRNA1-204ENST00000409323 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.53■□□□□ 0.4
CHRNA1-204ENST00000409323 GOLGB1Q14789 3259 aaKnown RBP17.52■□□□□ 0.4
CHRNA1-204ENST00000409323 PPEF1O14829 653 aaPredicted RBP17.52■□□□□ 0.39
CHRNA1-204ENST00000409323 AAMPQ13685 434 aa17.52■□□□□ 0.39
CHRNA1-204ENST00000409323 OS9Q13438 667 aaPredicted RBP17.51■□□□□ 0.39
CHRNA1-204ENST00000409323 CCDC136Q96JN2 1154 aa17.51■□□□□ 0.39
CHRNA1-204ENST00000409323 WTIPA6NIX2 430 aaPredicted RBP17.5■□□□□ 0.39
CHRNA1-204ENST00000409323 SNAP23O00161 211 aa17.5■□□□□ 0.39
CHRNA1-204ENST00000409323 ATG9AQ7Z3C6 839 aa17.5■□□□□ 0.39
CHRNA1-204ENST00000409323 PELP1Q8IZL8 1130 aaKnown RBP17.5■□□□□ 0.39
CHRNA1-204ENST00000409323 TTLL6Q8N841 843 aa17.5■□□□□ 0.39
CHRNA1-204ENST00000409323 CNKSR1Q969H4 720 aa17.5■□□□□ 0.39
CHRNA1-204ENST00000409323 COPRSQ9NQ92 184 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms