RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 CCDC194A0A1B0GVG4 234 aa15.72■□□□□ 0.11
AFF3-202ENST00000409236 SPAG1Q07617 926 aa15.72■□□□□ 0.11
AFF3-202ENST00000409236 SSRP1Q08945 709 aaKnown RBP15.72■□□□□ 0.11
AFF3-202ENST00000409236 ZNF428Q96B54 188 aa15.72■□□□□ 0.11
AFF3-202ENST00000409236 RAB11FIP3O75154 756 aa15.72■□□□□ 0.11
AFF3-202ENST00000409236 TUBB2AQ13885 445 aa15.72■□□□□ 0.11
AFF3-202ENST00000409236 TUBB2BQ9BVA1 445 aa15.72■□□□□ 0.11
AFF3-202ENST00000409236 GOLGA8AA7E2F4 631 aa15.71■□□□□ 0.11
AFF3-202ENST00000409236 GOLGA8BA8MQT2 603 aa15.71■□□□□ 0.11
AFF3-202ENST00000409236 CAPZA3Q96KX2 299 aa15.71■□□□□ 0.11
AFF3-202ENST00000409236 I3L4J1 428 aa15.71■□□□□ 0.11
AFF3-202ENST00000409236 ERCC5P28715 1186 aaPredicted RBP15.71■□□□□ 0.11
AFF3-202ENST00000409236 DBN1Q16643 649 aa15.71■□□□□ 0.11
AFF3-202ENST00000409236 CSRNP2Q9H175 543 aa15.71■□□□□ 0.11
AFF3-202ENST00000409236 XAB2Q9HCS7 855 aaKnown RBP15.71■□□□□ 0.11
AFF3-202ENST00000409236 PUF60Q9UHX1 559 aaKnown RBP15.71■□□□□ 0.11
AFF3-202ENST00000409236 INPP1P49441 399 aa15.71■□□□□ 0.11
AFF3-202ENST00000409236 UBASH3AP57075 661 aa15.71■□□□□ 0.11
AFF3-202ENST00000409236 TCERG1LQ5VWI1 586 aa15.71■□□□□ 0.11
AFF3-202ENST00000409236 PDCD7Q8N8D1 485 aaKnown RBP15.71■□□□□ 0.11
AFF3-202ENST00000409236 NLRP5P59047 1200 aa15.71■□□□□ 0.1
AFF3-202ENST00000409236 SPATS2Q86XZ4 545 aaKnown RBP15.71■□□□□ 0.1
AFF3-202ENST00000409236 SLC12A7Q9Y666 1083 aa15.71■□□□□ 0.1
AFF3-202ENST00000409236 AK9Q5TCS8 1911 aa15.7■□□□□ 0.1
AFF3-202ENST00000409236 GABPB1Q06547 395 aaPredicted RBP15.7■□□□□ 0.1
AFF3-202ENST00000409236 LARSQ9P2J5 1176 aaKnown RBP15.7■□□□□ 0.1
AFF3-202ENST00000409236 BMP15O95972 392 aa15.7■□□□□ 0.1
AFF3-202ENST00000409236 SKILP12757 684 aa15.7■□□□□ 0.1
AFF3-202ENST00000409236 SRGAP1Q7Z6B7 1085 aa15.7■□□□□ 0.1
AFF3-202ENST00000409236 CCDC88BA6NC98 1476 aa15.7■□□□□ 0.1
AFF3-202ENST00000409236 RBM5P52756 815 aaKnown RBP eCLIP15.7■□□□□ 0.1
AFF3-202ENST00000409236 CKAP2LQ8IYA6 745 aa15.7■□□□□ 0.1
AFF3-202ENST00000409236 SPATS2LQ9NUQ6 558 aaKnown RBP15.7■□□□□ 0.1
AFF3-202ENST00000409236 SLC8A1P32418 973 aa15.7■□□□□ 0.1
AFF3-202ENST00000409236 PLCB1Q9NQ66 1216 aa15.7■□□□□ 0.1
AFF3-202ENST00000409236 PFDN1O60925 122 aa15.7■□□□□ 0.1
AFF3-202ENST00000409236 ERMNQ8TAM6 284 aa15.7■□□□□ 0.1
AFF3-202ENST00000409236 SMARCC2Q8TAQ2 1214 aa15.7■□□□□ 0.1
AFF3-202ENST00000409236 MPHOSPH6Q99547 160 aaKnown RBP15.7■□□□□ 0.1
AFF3-202ENST00000409236 UTP14AQ9BVJ6 771 aaKnown RBP15.7■□□□□ 0.1
AFF3-202ENST00000409236 ZSWIM4Q9H7M6 989 aa15.7■□□□□ 0.1
AFF3-202ENST00000409236 NOLC1Q14978 699 aaKnown RBP eCLIP15.7■□□□□ 0.1
AFF3-202ENST00000409236 HSPA1LP34931 641 aa15.69■□□□□ 0.1
AFF3-202ENST00000409236 PPP1R7Q15435 360 aa15.69■□□□□ 0.1
AFF3-202ENST00000409236 HSP90AA5PQ58FG0 334 aa15.69■□□□□ 0.1
AFF3-202ENST00000409236 ARHGEF2Q92974 986 aaKnown RBP15.69■□□□□ 0.1
AFF3-202ENST00000409236 RNF41Q9H4P4 317 aaPredicted RBP15.69■□□□□ 0.1
AFF3-202ENST00000409236 ZSCAN16Q9H4T2 348 aaPredicted RBP15.69■□□□□ 0.1
AFF3-202ENST00000409236 PNISRQ8TF01 805 aaKnown RBP15.69■□□□□ 0.1
AFF3-202ENST00000409236 N4BP3O15049 544 aa15.69■□□□□ 0.1
AFF3-202ENST00000409236 CPLX3Q8WVH0 158 aa15.69■□□□□ 0.1
AFF3-202ENST00000409236 KCNK9Q9NPC2 374 aa15.69■□□□□ 0.1
AFF3-202ENST00000409236 MUM1Q2TAK8 710 aa15.69■□□□□ 0.1
AFF3-202ENST00000409236 TAF7Q15545 349 aaPredicted RBP15.69■□□□□ 0.1
AFF3-202ENST00000409236 BANK1Q8NDB2 785 aa15.69■□□□□ 0.1
AFF3-202ENST00000409236 CHMP2AO43633 222 aa15.69■□□□□ 0.1
AFF3-202ENST00000409236 CCDC26Q8TAB7 109 aa15.69■□□□□ 0.1
AFF3-202ENST00000409236 DHX57Q6P158 1386 aaKnown RBP15.68■□□□□ 0.1
AFF3-202ENST00000409236 HMOX1P09601 288 aa15.68■□□□□ 0.1
AFF3-202ENST00000409236 TWISTNBQ3B726 338 aaPredicted RBP15.68■□□□□ 0.1
AFF3-202ENST00000409236 CATIPQ7Z7H3 387 aa15.68■□□□□ 0.1
AFF3-202ENST00000409236 PLCD3Q8N3E9 789 aa15.68■□□□□ 0.1
AFF3-202ENST00000409236 TRIM47Q96LD4 638 aa15.68■□□□□ 0.1
AFF3-202ENST00000409236 SMARCA2P51531 1590 aa15.68■□□□□ 0.1
AFF3-202ENST00000409236 GEN1Q17RS7 908 aa15.68■□□□□ 0.1
AFF3-202ENST00000409236 INF2Q27J81 1249 aa15.68■□□□□ 0.1
AFF3-202ENST00000409236 LIMCH1Q9UPQ0 1083 aa15.68■□□□□ 0.1
AFF3-202ENST00000409236 STX6O43752 255 aa15.68■□□□□ 0.1
AFF3-202ENST00000409236 TBCAO75347 108 aaKnown RBP15.68■□□□□ 0.1
AFF3-202ENST00000409236 CCDC102BQ68D86 513 aa15.68■□□□□ 0.1
AFF3-202ENST00000409236 LRP2BPQ9P2M1 347 aa15.68■□□□□ 0.1
AFF3-202ENST00000409236 UBLCP1Q8WVY7 318 aaPredicted RBP15.68■□□□□ 0.1
AFF3-202ENST00000409236 KLHL40Q2TBA0 621 aa15.67■□□□□ 0.1
AFF3-202ENST00000409236 DACT3Q96B18 629 aaPredicted RBP15.67■□□□□ 0.1
AFF3-202ENST00000409236 NDUFAB1O14561 156 aa15.67■□□□□ 0.1
AFF3-202ENST00000409236 MINK1Q8N4C8 1332 aaPredicted RBP15.67■□□□□ 0.1
AFF3-202ENST00000409236 NUTM2FA1L443 756 aa15.67■□□□□ 0.1
AFF3-202ENST00000409236 RILPL1Q5EBL4 403 aa15.67■□□□□ 0.1
AFF3-202ENST00000409236 ATF7IPQ6VMQ6 1270 aa15.67■□□□□ 0.1
AFF3-202ENST00000409236 RAB11FIP4Q86YS3 637 aa15.67■□□□□ 0.1
AFF3-202ENST00000409236 HMGB3O15347 200 aaKnown RBP15.67■□□□□ 0.1
AFF3-202ENST00000409236 PPFIA3O75145 1194 aa15.67■□□□□ 0.1
AFF3-202ENST00000409236 ZSCAN23Q3MJ62 389 aa15.67■□□□□ 0.1
AFF3-202ENST00000409236 PHLDB3Q6NSJ2 640 aa15.67■□□□□ 0.1
AFF3-202ENST00000409236 C1orf115Q9H7X2 142 aa15.67■□□□□ 0.1
AFF3-202ENST00000409236 TMOD2Q9NZR1 351 aa15.67■□□□□ 0.1
AFF3-202ENST00000409236 UTP11Q9Y3A2 253 aaKnown RBP15.67■□□□□ 0.1
AFF3-202ENST00000409236 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.67■□□□□ 0.1
AFF3-202ENST00000409236 IQCA1Q86XH1 822 aa15.67■□□□□ 0.1
AFF3-202ENST00000409236 ATP6V1AP38606 617 aa15.66■□□□□ 0.1
AFF3-202ENST00000409236 LRSAM1Q6UWE0 723 aa15.66■□□□□ 0.1
AFF3-202ENST00000409236 DNAI1Q9UI46 699 aa15.66■□□□□ 0.1
AFF3-202ENST00000409236 KIF21BO75037 1637 aa15.66■□□□□ 0.1
AFF3-202ENST00000409236 WDHD1O75717 1129 aaPredicted RBP15.66■□□□□ 0.1
AFF3-202ENST00000409236 SYT1P21579 422 aa15.66■□□□□ 0.1
AFF3-202ENST00000409236 MAK16Q9BXY0 300 aaKnown RBP15.66■□□□□ 0.1
AFF3-202ENST00000409236 GIPC1O14908 333 aa15.66■□□□□ 0.1
AFF3-202ENST00000409236 ACTN4O43707 911 aaKnown RBP15.66■□□□□ 0.1
AFF3-202ENST00000409236 TNPO1Q92973 898 aaKnown RBP15.66■□□□□ 0.1
AFF3-202ENST00000409236 FAF1Q9UNN5 650 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms