RNA–Protein interactions for RNA: ENST00000406921.7

ITSN2-203, Transcript of intersectin 2, humanhuman

TSL 1 (best) BASIC

Gene ITSN2, Length 4,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-203ENST00000406921 MCM5P33992 734 aa17.41■□□□□ 0.38
ITSN2-203ENST00000406921 C8orf34Q49A92 452 aa17.41■□□□□ 0.38
ITSN2-203ENST00000406921 CRNKL1Q9BZJ0 848 aaKnown RBP17.41■□□□□ 0.38
ITSN2-203ENST00000406921 ZFYVE16Q7Z3T8 1539 aa17.41■□□□□ 0.38
ITSN2-203ENST00000406921 NPC1L1Q9UHC9 1359 aa17.41■□□□□ 0.38
ITSN2-203ENST00000406921 PDCL3Q9H2J4 239 aa17.41■□□□□ 0.38
ITSN2-203ENST00000406921 SPTY2D1Q68D10 685 aaPredicted RBP17.4■□□□□ 0.38
ITSN2-203ENST00000406921 CAGE1Q8TC20 777 aa17.4■□□□□ 0.38
ITSN2-203ENST00000406921 PNMA6EA0A0J9YXQ4 647 aa17.4■□□□□ 0.38
ITSN2-203ENST00000406921 CCDC173Q0VFZ6 552 aa17.4■□□□□ 0.38
ITSN2-203ENST00000406921 CFAP100Q494V2 611 aa17.4■□□□□ 0.38
ITSN2-203ENST00000406921 SMARCE1Q969G3 411 aa17.4■□□□□ 0.38
ITSN2-203ENST00000406921 CPA1P15085 419 aa17.4■□□□□ 0.38
ITSN2-203ENST00000406921 KAT14Q9H8E8 782 aa17.4■□□□□ 0.38
ITSN2-203ENST00000406921 ZFYP08048 801 aaPredicted RBP17.39■□□□□ 0.37
ITSN2-203ENST00000406921 ISM2Q6H9L7 571 aa17.39■□□□□ 0.37
ITSN2-203ENST00000406921 DTNBO60941 627 aa17.39■□□□□ 0.37
ITSN2-203ENST00000406921 FSIP1Q8NA03 581 aa17.39■□□□□ 0.37
ITSN2-203ENST00000406921 DBNDD2Q9BQY9 259 aa17.39■□□□□ 0.37
ITSN2-203ENST00000406921 ZNHIT6Q9NWK9 470 aaKnown RBP17.39■□□□□ 0.37
ITSN2-203ENST00000406921 HMG20BQ9P0W2 317 aa17.39■□□□□ 0.37
ITSN2-203ENST00000406921 DACH1Q9UI36 760 aa17.39■□□□□ 0.37
ITSN2-203ENST00000406921 CEP131Q9UPN4 1083 aa17.39■□□□□ 0.37
ITSN2-203ENST00000406921 TMEM94Q12767 1356 aa17.39■□□□□ 0.37
ITSN2-203ENST00000406921 WTAPQ15007 396 aa17.38■□□□□ 0.37
ITSN2-203ENST00000406921 DEF6Q9H4E7 631 aa17.38■□□□□ 0.37
ITSN2-203ENST00000406921 SH3TC1Q8TE82 1336 aa17.38■□□□□ 0.37
ITSN2-203ENST00000406921 TRAPPC3LQ5T215 181 aa17.38■□□□□ 0.37
ITSN2-203ENST00000406921 PLBD2Q8NHP8 589 aa17.38■□□□□ 0.37
ITSN2-203ENST00000406921 METTL22Q9BUU2 404 aaPredicted RBP17.38■□□□□ 0.37
ITSN2-203ENST00000406921 BAG4O95429 457 aaKnown RBP17.37■□□□□ 0.37
ITSN2-203ENST00000406921 NOM1Q5C9Z4 860 aaKnown RBP17.37■□□□□ 0.37
ITSN2-203ENST00000406921 RBM26Q5T8P6 1007 aaKnown RBP17.37■□□□□ 0.37
ITSN2-203ENST00000406921 MAGEB6Q8N7X4 407 aa17.37■□□□□ 0.37
ITSN2-203ENST00000406921 UBA5Q9GZZ9 404 aa17.37■□□□□ 0.37
ITSN2-203ENST00000406921 ABCA8O94911 1581 aa17.37■□□□□ 0.37
ITSN2-203ENST00000406921 A0A1B0GUL7 405 aa17.37■□□□□ 0.37
ITSN2-203ENST00000406921 HLA-DOAP06340 250 aa17.37■□□□□ 0.37
ITSN2-203ENST00000406921 PDIA4P13667 645 aaKnown RBP17.37■□□□□ 0.37
ITSN2-203ENST00000406921 ITGA6P23229 1130 aa17.37■□□□□ 0.37
ITSN2-203ENST00000406921 EIF4A1P60842 406 aaKnown RBP17.37■□□□□ 0.37
ITSN2-203ENST00000406921 Q6ZUG5 572 aa17.37■□□□□ 0.37
ITSN2-203ENST00000406921 KDM6BO15054 1643 aa17.37■□□□□ 0.37
ITSN2-203ENST00000406921 ZBTB43O43298 467 aa17.37■□□□□ 0.37
ITSN2-203ENST00000406921 RBM27Q9P2N5 1060 aaKnown RBP17.37■□□□□ 0.37
ITSN2-203ENST00000406921 SYCP1Q15431 976 aa17.37■□□□□ 0.37
ITSN2-203ENST00000406921 RXRAP19793 462 aa17.36■□□□□ 0.37
ITSN2-203ENST00000406921 TAF5LO75529 589 aa17.36■□□□□ 0.37
ITSN2-203ENST00000406921 GPS2Q13227 327 aa17.36■□□□□ 0.37
ITSN2-203ENST00000406921 SUCLG2Q96I99 432 aa17.36■□□□□ 0.37
ITSN2-203ENST00000406921 CABP5Q9NP86 173 aa17.36■□□□□ 0.37
ITSN2-203ENST00000406921 PAXIP1Q6ZW49 1069 aaPredicted RBP17.36■□□□□ 0.37
ITSN2-203ENST00000406921 NYXQ9GZU5 481 aa17.36■□□□□ 0.37
ITSN2-203ENST00000406921 CCDC129Q6ZRS4 1044 aa17.35■□□□□ 0.37
ITSN2-203ENST00000406921 ERCC6L2Q5T890 1561 aa17.35■□□□□ 0.37
ITSN2-203ENST00000406921 EYA2O00167 538 aa17.35■□□□□ 0.37
ITSN2-203ENST00000406921 TSPY3P0CV98 308 aa17.35■□□□□ 0.37
ITSN2-203ENST00000406921 TSPY8P0CW00 308 aa17.35■□□□□ 0.37
ITSN2-203ENST00000406921 IDEP14735 1019 aa17.35■□□□□ 0.37
ITSN2-203ENST00000406921 CHMLP26374 656 aa17.35■□□□□ 0.37
ITSN2-203ENST00000406921 OGFOD1Q8N543 542 aa17.35■□□□□ 0.37
ITSN2-203ENST00000406921 ESR2Q92731 530 aa17.35■□□□□ 0.37
ITSN2-203ENST00000406921 MCM9Q9NXL9 1143 aa17.35■□□□□ 0.37
ITSN2-203ENST00000406921 MYCNP04198 464 aaPredicted RBP17.35■□□□□ 0.37
ITSN2-203ENST00000406921 KIF5BP33176 963 aa17.35■□□□□ 0.37
ITSN2-203ENST00000406921 EIF5P55010 431 aaKnown RBP17.35■□□□□ 0.37
ITSN2-203ENST00000406921 CNNM3Q8NE01 707 aa17.35■□□□□ 0.37
ITSN2-203ENST00000406921 USP21Q9UK80 565 aa17.35■□□□□ 0.37
ITSN2-203ENST00000406921 CNBD1Q8NA66 436 aa17.34■□□□□ 0.37
ITSN2-203ENST00000406921 SEPT11Q9NVA2 429 aaKnown RBP17.34■□□□□ 0.37
ITSN2-203ENST00000406921 FAM182BQ5T319 152 aa17.34■□□□□ 0.37
ITSN2-203ENST00000406921 PARP3Q9Y6F1 533 aa17.34■□□□□ 0.37
ITSN2-203ENST00000406921 ROBO2Q9HCK4 1378 aa17.33■□□□□ 0.37
ITSN2-203ENST00000406921 TTC41PQ6P2S7 1318 aa17.33■□□□□ 0.37
ITSN2-203ENST00000406921 PRC1O43663 620 aa17.33■□□□□ 0.37
ITSN2-203ENST00000406921 IFIT1BQ5T764 474 aaKnown RBP17.33■□□□□ 0.37
ITSN2-203ENST00000406921 RNF113AO15541 343 aaKnown RBP17.33■□□□□ 0.37
ITSN2-203ENST00000406921 CCDC183Q5T5S1 534 aa17.33■□□□□ 0.37
ITSN2-203ENST00000406921 VEZTQ9HBM0 779 aa17.33■□□□□ 0.37
ITSN2-203ENST00000406921 MATR3P43243 847 aaKnown RBP eCLIP17.33■□□□□ 0.36
ITSN2-203ENST00000406921 GCKRQ14397 625 aa17.33■□□□□ 0.36
ITSN2-203ENST00000406921 USP25Q9UHP3 1055 aa17.33■□□□□ 0.36
ITSN2-203ENST00000406921 SAMD9LQ8IVG5 1584 aa17.33■□□□□ 0.36
ITSN2-203ENST00000406921 TSPOAP1O95153 1857 aa17.33■□□□□ 0.36
ITSN2-203ENST00000406921 TTC37Q6PGP7 1564 aa17.32■□□□□ 0.36
ITSN2-203ENST00000406921 MAGEB6P1A0A0J9YX57 407 aa17.32■□□□□ 0.36
ITSN2-203ENST00000406921 ZKSCAN3Q9BRR0 538 aa17.32■□□□□ 0.36
ITSN2-203ENST00000406921 ALG1Q9BT22 464 aa17.32■□□□□ 0.36
ITSN2-203ENST00000406921 SPATA31E1Q6ZUB1 1445 aa17.32■□□□□ 0.36
ITSN2-203ENST00000406921 PRR36Q9H6K5 1346 aa17.32■□□□□ 0.36
ITSN2-203ENST00000406921 GIGYF1O75420 1035 aaPredicted RBP17.32■□□□□ 0.36
ITSN2-203ENST00000406921 SKIDA1Q1XH10 827 aa17.32■□□□□ 0.36
ITSN2-203ENST00000406921 WWC2Q6AWC2 1192 aa17.32■□□□□ 0.36
ITSN2-203ENST00000406921 ZGPATQ8N5A5 531 aaKnown RBP17.32■□□□□ 0.36
ITSN2-203ENST00000406921 CCDC191Q8NCU4 936 aa17.32■□□□□ 0.36
ITSN2-203ENST00000406921 MAGI2Q86UL8 1455 aa17.32■□□□□ 0.36
ITSN2-203ENST00000406921 APOBRQ0VD83 1088 aa17.32■□□□□ 0.36
ITSN2-203ENST00000406921 ENOX2Q16206 610 aaKnown RBP17.32■□□□□ 0.36
ITSN2-203ENST00000406921 CREB3L3Q68CJ9 461 aa17.32■□□□□ 0.36
ITSN2-203ENST00000406921 ARHGEF10O15013 1369 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms