RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 ODF2LQ9ULJ1 636 aa13.75□□□□□ -0.21
SMCR8-201ENST00000406438 USP16Q9Y5T5 823 aa13.75□□□□□ -0.21
SMCR8-201ENST00000406438 ARAP1Q96P48 1450 aa13.75□□□□□ -0.21
SMCR8-201ENST00000406438 SSH1Q8WYL5 1049 aa13.75□□□□□ -0.21
SMCR8-201ENST00000406438 CCDC152Q4G0S7 254 aa13.75□□□□□ -0.21
SMCR8-201ENST00000406438 OTUD6BQ8N6M0 293 aa13.75□□□□□ -0.21
SMCR8-201ENST00000406438 NSRP1Q9H0G5 558 aaKnown RBP13.75□□□□□ -0.21
SMCR8-201ENST00000406438 ZNF219Q9P2Y4 722 aaPredicted RBP13.75□□□□□ -0.21
SMCR8-201ENST00000406438 KRT23Q9C075 422 aa13.75□□□□□ -0.21
SMCR8-201ENST00000406438 NESP48681 1621 aa13.75□□□□□ -0.21
SMCR8-201ENST00000406438 ADCY5O95622 1261 aa13.75□□□□□ -0.21
SMCR8-201ENST00000406438 PAIP2Q9BPZ3 127 aaKnown RBP13.75□□□□□ -0.21
SMCR8-201ENST00000406438 STX8Q9UNK0 236 aa13.75□□□□□ -0.21
SMCR8-201ENST00000406438 KIF4AO95239 1232 aa13.75□□□□□ -0.21
SMCR8-201ENST00000406438 PLCD3Q8N3E9 789 aa13.75□□□□□ -0.21
SMCR8-201ENST00000406438 USHBP1Q8N6Y0 703 aa13.75□□□□□ -0.21
SMCR8-201ENST00000406438 CDK13Q14004 1512 aaKnown RBP13.75□□□□□ -0.21
SMCR8-201ENST00000406438 STMN4Q9H169 189 aaPredicted RBP13.74□□□□□ -0.21
SMCR8-201ENST00000406438 ISM2Q6H9L7 571 aa13.74□□□□□ -0.21
SMCR8-201ENST00000406438 IMPG2Q9BZV3 1241 aa13.74□□□□□ -0.21
SMCR8-201ENST00000406438 ARHGEF11O15085 1522 aa13.74□□□□□ -0.21
SMCR8-201ENST00000406438 BMP15O95972 392 aa13.74□□□□□ -0.21
SMCR8-201ENST00000406438 SYKP43405 635 aa13.74□□□□□ -0.21
SMCR8-201ENST00000406438 CEP135Q66GS9 1140 aa13.74□□□□□ -0.21
SMCR8-201ENST00000406438 ZNF622Q969S3 477 aaKnown RBP eCLIP13.74□□□□□ -0.21
SMCR8-201ENST00000406438 KRT13P13646 458 aa13.74□□□□□ -0.21
SMCR8-201ENST00000406438 TMTC2Q8N394 836 aa13.74□□□□□ -0.21
SMCR8-201ENST00000406438 THUMPD2Q9BTF0 503 aaKnown RBP13.74□□□□□ -0.21
SMCR8-201ENST00000406438 WTAPQ15007 396 aa13.74□□□□□ -0.21
SMCR8-201ENST00000406438 NEK1Q96PY6 1258 aa13.74□□□□□ -0.21
SMCR8-201ENST00000406438 SERPINA10Q9UK55 444 aa13.74□□□□□ -0.21
SMCR8-201ENST00000406438 SLU7O95391 586 aaKnown RBP13.73□□□□□ -0.21
SMCR8-201ENST00000406438 UBASH3AP57075 661 aa13.73□□□□□ -0.21
SMCR8-201ENST00000406438 WAPLQ7Z5K2 1190 aa13.73□□□□□ -0.21
SMCR8-201ENST00000406438 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.73□□□□□ -0.21
SMCR8-201ENST00000406438 V9GYY5 206 aaPredicted RBP13.73□□□□□ -0.21
SMCR8-201ENST00000406438 PIK3R4Q99570 1358 aa13.73□□□□□ -0.21
SMCR8-201ENST00000406438 RARSP54136 660 aaKnown RBP13.73□□□□□ -0.21
SMCR8-201ENST00000406438 MXRA7P84157 204 aa13.73□□□□□ -0.21
SMCR8-201ENST00000406438 TIGD1Q96MW7 591 aa13.73□□□□□ -0.21
SMCR8-201ENST00000406438 N4BP3O15049 544 aa13.73□□□□□ -0.21
SMCR8-201ENST00000406438 CNNM2Q9H8M5 875 aa13.73□□□□□ -0.21
SMCR8-201ENST00000406438 NCAPD3P42695 1498 aa13.73□□□□□ -0.21
SMCR8-201ENST00000406438 CYLC1P35663 651 aaPredicted RBP13.73□□□□□ -0.21
SMCR8-201ENST00000406438 OGFOD1Q8N543 542 aa13.73□□□□□ -0.21
SMCR8-201ENST00000406438 FBF1Q8TES7 1133 aa13.73□□□□□ -0.21
SMCR8-201ENST00000406438 B4DLN1 442 aa13.73□□□□□ -0.21
SMCR8-201ENST00000406438 F6X3S4 739 aa13.73□□□□□ -0.21
SMCR8-201ENST00000406438 ZNF165P49910 485 aa13.73□□□□□ -0.21
SMCR8-201ENST00000406438 MRPL12P52815 198 aaKnown RBP13.73□□□□□ -0.21
SMCR8-201ENST00000406438 GSTA5Q7RTV2 222 aa13.73□□□□□ -0.21
SMCR8-201ENST00000406438 CEP83Q9Y592 693 aa13.72□□□□□ -0.21
SMCR8-201ENST00000406438 USP25Q9UHP3 1055 aa13.72□□□□□ -0.21
SMCR8-201ENST00000406438 ATP2A1O14983 1001 aa13.72□□□□□ -0.21
SMCR8-201ENST00000406438 CCDC14Q49A88 953 aa13.72□□□□□ -0.21
SMCR8-201ENST00000406438 ECHDC1Q9NTX5 307 aa13.72□□□□□ -0.21
SMCR8-201ENST00000406438 DHX29Q7Z478 1369 aaKnown RBP13.72□□□□□ -0.21
SMCR8-201ENST00000406438 ORC3Q9UBD5 711 aaPredicted RBP13.72□□□□□ -0.21
SMCR8-201ENST00000406438 CTAGE9A4FU28 777 aa13.72□□□□□ -0.21
SMCR8-201ENST00000406438 HSPA4P34932 840 aa13.72□□□□□ -0.21
SMCR8-201ENST00000406438 RBM25P49756 843 aaKnown RBP13.72□□□□□ -0.21
SMCR8-201ENST00000406438 FLIIQ13045 1269 aa13.72□□□□□ -0.21
SMCR8-201ENST00000406438 MAP7D1Q3KQU3 841 aa13.72□□□□□ -0.21
SMCR8-201ENST00000406438 UBE3BQ7Z3V4 1068 aa13.72□□□□□ -0.21
SMCR8-201ENST00000406438 DAAM2Q86T65 1068 aa13.71□□□□□ -0.21
SMCR8-201ENST00000406438 EIF2AK4Q9P2K8 1649 aaKnown RBP13.71□□□□□ -0.21
SMCR8-201ENST00000406438 C16orf71Q8IYS4 520 aaPredicted RBP13.71□□□□□ -0.21
SMCR8-201ENST00000406438 NBPF6Q5VWK0 638 aa13.71□□□□□ -0.21
SMCR8-201ENST00000406438 NBPF5PQ86XG9 351 aaPredicted RBP13.71□□□□□ -0.21
SMCR8-201ENST00000406438 NBPF4Q96M43 638 aa13.71□□□□□ -0.21
SMCR8-201ENST00000406438 HAND2P61296 217 aa13.71□□□□□ -0.21
SMCR8-201ENST00000406438 KCNG4Q8TDN1 519 aa13.71□□□□□ -0.21
SMCR8-201ENST00000406438 TFIP11Q9UBB9 837 aaKnown RBP13.71□□□□□ -0.21
SMCR8-201ENST00000406438 MAPK8IP2Q13387 824 aaPredicted RBP13.71□□□□□ -0.21
SMCR8-201ENST00000406438 CCDC171Q6TFL3 1326 aa13.71□□□□□ -0.22
SMCR8-201ENST00000406438 PLS1Q14651 629 aa13.71□□□□□ -0.22
SMCR8-201ENST00000406438 HEATR3Q7Z4Q2 680 aa13.71□□□□□ -0.22
SMCR8-201ENST00000406438 SPAG5Q96R06 1193 aa13.71□□□□□ -0.22
SMCR8-201ENST00000406438 NDC80O14777 642 aa13.7□□□□□ -0.22
SMCR8-201ENST00000406438 AKR1B10O60218 316 aa13.7□□□□□ -0.22
SMCR8-201ENST00000406438 GAS8O95995 478 aa13.7□□□□□ -0.22
SMCR8-201ENST00000406438 TOPBP1Q92547 1522 aa13.7□□□□□ -0.22
SMCR8-201ENST00000406438 PSMC4P43686 418 aa13.7□□□□□ -0.22
SMCR8-201ENST00000406438 GNG11P61952 73 aa13.7□□□□□ -0.22
SMCR8-201ENST00000406438 HDAC9Q9UKV0 1011 aa13.7□□□□□ -0.22
SMCR8-201ENST00000406438 UQCRFS1P1P0C7P4 283 aa13.7□□□□□ -0.22
SMCR8-201ENST00000406438 CCDC6Q16204 474 aa13.7□□□□□ -0.22
SMCR8-201ENST00000406438 ESR2Q92731 530 aa13.7□□□□□ -0.22
SMCR8-201ENST00000406438 PANK2Q9BZ23 570 aa13.7□□□□□ -0.22
SMCR8-201ENST00000406438 TXNDC16Q9P2K2 825 aa13.7□□□□□ -0.22
SMCR8-201ENST00000406438 GNAQP50148 359 aa13.7□□□□□ -0.22
SMCR8-201ENST00000406438 ZBTB43O43298 467 aa13.7□□□□□ -0.22
SMCR8-201ENST00000406438 RTN1Q16799 776 aa13.7□□□□□ -0.22
SMCR8-201ENST00000406438 CCDC63Q8NA47 563 aa13.7□□□□□ -0.22
SMCR8-201ENST00000406438 TNPO1Q92973 898 aaKnown RBP13.7□□□□□ -0.22
SMCR8-201ENST00000406438 SETDB2Q96T68 719 aa13.7□□□□□ -0.22
SMCR8-201ENST00000406438 SPDYE3A6NKU9 549 aa13.7□□□□□ -0.22
SMCR8-201ENST00000406438 LARP6Q9BRS8 491 aaKnown RBP13.7□□□□□ -0.22
SMCR8-201ENST00000406438 ARFGAP3Q9NP61 516 aa13.7□□□□□ -0.22
SMCR8-201ENST00000406438 SNX16P57768 344 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms