RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 IGHDP01880 384 aa27.38■■□□□ 1.97
EPCAM-202ENST00000405271 FOXO4P98177 505 aa27.38■■□□□ 1.97
EPCAM-202ENST00000405271 SSH3Q8TE77 659 aa27.38■■□□□ 1.97
EPCAM-202ENST00000405271 PDE8AO60658 829 aa27.37■■□□□ 1.97
EPCAM-202ENST00000405271 EPHA10Q5JZY3 1008 aa27.37■■□□□ 1.97
EPCAM-202ENST00000405271 TPTE2Q6XPS3 522 aa27.37■■□□□ 1.97
EPCAM-202ENST00000405271 PNMA6EA0A0J9YXQ4 647 aa27.36■■□□□ 1.97
EPCAM-202ENST00000405271 SRGAP3O43295 1099 aa27.36■■□□□ 1.97
EPCAM-202ENST00000405271 YY1P25490 414 aa27.36■■□□□ 1.97
EPCAM-202ENST00000405271 TGFB2P61812 414 aa27.36■■□□□ 1.97
EPCAM-202ENST00000405271 POLA2Q14181 598 aa27.36■■□□□ 1.97
EPCAM-202ENST00000405271 ABCC12Q96J65 1359 aa27.35■■□□□ 1.97
EPCAM-202ENST00000405271 C10orf71Q711Q0 1435 aa27.35■■□□□ 1.97
EPCAM-202ENST00000405271 NUTM1Q86Y26 1132 aa27.35■■□□□ 1.97
EPCAM-202ENST00000405271 SYNE4Q8N205 404 aa27.35■■□□□ 1.97
EPCAM-202ENST00000405271 GTF2E1P29083 439 aaPredicted RBP27.34■■□□□ 1.97
EPCAM-202ENST00000405271 CTSWP56202 376 aa27.34■■□□□ 1.97
EPCAM-202ENST00000405271 CNBD1Q8NA66 436 aa27.34■■□□□ 1.97
EPCAM-202ENST00000405271 GCC1Q96CN9 775 aa27.34■■□□□ 1.97
EPCAM-202ENST00000405271 A0A1B0GUL6 1792 aa27.34■■□□□ 1.97
EPCAM-202ENST00000405271 TAF1P21675 1872 aa27.33■■□□□ 1.97
EPCAM-202ENST00000405271 A0A0G2JLW4 131 aa27.33■■□□□ 1.97
EPCAM-202ENST00000405271 ERFEQ4G0M1 354 aa27.33■■□□□ 1.97
EPCAM-202ENST00000405271 SLC10A5Q5PT55 438 aa27.33■■□□□ 1.97
EPCAM-202ENST00000405271 LMBR1LQ6UX01 489 aa27.33■■□□□ 1.97
EPCAM-202ENST00000405271 WWC3Q9ULE0 1092 aa27.33■■□□□ 1.97
EPCAM-202ENST00000405271 KIF13BQ9NQT8 1826 aa27.32■■□□□ 1.96
EPCAM-202ENST00000405271 GRIN3BO60391 1043 aa27.32■■□□□ 1.96
EPCAM-202ENST00000405271 SERPINB2P05120 415 aa27.32■■□□□ 1.96
EPCAM-202ENST00000405271 SMC5Q8IY18 1101 aa27.32■■□□□ 1.96
EPCAM-202ENST00000405271 NPHP1O15259 732 aa27.31■■□□□ 1.96
EPCAM-202ENST00000405271 CSF1RP07333 972 aa27.31■■□□□ 1.96
EPCAM-202ENST00000405271 DCTPP1Q9H773 170 aa27.31■■□□□ 1.96
EPCAM-202ENST00000405271 RTL9Q8NET4 1388 aa27.3■■□□□ 1.96
EPCAM-202ENST00000405271 HCLS1P14317 486 aaPredicted RBP27.3■■□□□ 1.96
EPCAM-202ENST00000405271 ST5P78524 1137 aa27.3■■□□□ 1.96
EPCAM-202ENST00000405271 PRR5LQ6MZQ0 368 aa27.3■■□□□ 1.96
EPCAM-202ENST00000405271 TTLL11Q8NHH1 800 aa27.3■■□□□ 1.96
EPCAM-202ENST00000405271 CHMP3Q9Y3E7 222 aa27.3■■□□□ 1.96
EPCAM-202ENST00000405271 COL11A2P13942 1736 aaPredicted RBP27.3■■□□□ 1.96
EPCAM-202ENST00000405271 DPEP1P16444 411 aa27.29■■□□□ 1.96
EPCAM-202ENST00000405271 CACNA1SQ13698 1873 aa27.29■■□□□ 1.96
EPCAM-202ENST00000405271 DLEC1Q9Y238 1755 aa27.29■■□□□ 1.96
EPCAM-202ENST00000405271 KCNA3P22001 575 aa27.27■■□□□ 1.96
EPCAM-202ENST00000405271 RFX5P48382 616 aaPredicted RBP27.26■■□□□ 1.96
EPCAM-202ENST00000405271 FAM161AQ3B820 660 aa27.26■■□□□ 1.96
EPCAM-202ENST00000405271 CCDC152Q4G0S7 254 aa27.26■■□□□ 1.96
EPCAM-202ENST00000405271 SF3B3Q15393 1217 aaKnown RBP27.26■■□□□ 1.95
EPCAM-202ENST00000405271 CCDC57Q2TAC2 916 aa27.26■■□□□ 1.95
EPCAM-202ENST00000405271 HSP90AB4PQ58FF6 505 aa27.26■■□□□ 1.95
EPCAM-202ENST00000405271 NLRP3Q96P20 1036 aa27.26■■□□□ 1.95
EPCAM-202ENST00000405271 COPRSQ9NQ92 184 aa27.26■■□□□ 1.95
EPCAM-202ENST00000405271 NOP58Q9Y2X3 529 aaKnown RBP27.26■■□□□ 1.95
EPCAM-202ENST00000405271 IFIT5Q13325 482 aaKnown RBP27.24■■□□□ 1.95
EPCAM-202ENST00000405271 GREM2Q9H772 168 aa27.24■■□□□ 1.95
EPCAM-202ENST00000405271 SURF6O75683 361 aaKnown RBP27.23■■□□□ 1.95
EPCAM-202ENST00000405271 EXOC6BQ9Y2D4 811 aa27.23■■□□□ 1.95
EPCAM-202ENST00000405271 ANKRD18BA2A2Z9 1011 aa27.22■■□□□ 1.95
EPCAM-202ENST00000405271 RAB11FIP3O75154 756 aa27.22■■□□□ 1.95
EPCAM-202ENST00000405271 ITGA6P23229 1130 aa27.22■■□□□ 1.95
EPCAM-202ENST00000405271 PTPN12Q05209 780 aaKnown RBP27.22■■□□□ 1.95
EPCAM-202ENST00000405271 CHRNA5P30532 468 aa27.21■■□□□ 1.95
EPCAM-202ENST00000405271 FBXO3Q9UK99 471 aa27.21■■□□□ 1.95
EPCAM-202ENST00000405271 BCS1LQ9Y276 419 aa27.21■■□□□ 1.95
EPCAM-202ENST00000405271 ERC1Q8IUD2 1116 aa27.21■■□□□ 1.95
EPCAM-202ENST00000405271 CCDC85AQ96PX6 553 aaPredicted RBP27.21■■□□□ 1.95
EPCAM-202ENST00000405271 PIM2Q9P1W9 311 aa27.21■■□□□ 1.95
EPCAM-202ENST00000405271 PA2G4Q9UQ80 394 aaKnown RBP27.21■■□□□ 1.95
EPCAM-202ENST00000405271 COL4A1P02462 1669 aa27.2■■□□□ 1.94
EPCAM-202ENST00000405271 ARAP2Q8WZ64 1704 aa27.2■■□□□ 1.94
EPCAM-202ENST00000405271 KIAA1551Q9HCM1 1747 aa27.19■■□□□ 1.94
EPCAM-202ENST00000405271 NUCB1Q02818 461 aa27.19■■□□□ 1.94
EPCAM-202ENST00000405271 TAF7LQ5H9L4 462 aa27.19■■□□□ 1.94
EPCAM-202ENST00000405271 C3orf67Q6ZVT6 689 aa27.19■■□□□ 1.94
EPCAM-202ENST00000405271 CCDC24Q8N4L8 307 aa27.19■■□□□ 1.94
EPCAM-202ENST00000405271 LRRC37AA6NMS7 1700 aa27.18■■□□□ 1.94
EPCAM-202ENST00000405271 G3BP1Q13283 466 aaKnown RBP eCLIP27.18■■□□□ 1.94
EPCAM-202ENST00000405271 OS9Q13438 667 aaPredicted RBP27.18■■□□□ 1.94
EPCAM-202ENST00000405271 KLHDC4Q8TBB5 520 aa27.18■■□□□ 1.94
EPCAM-202ENST00000405271 ZBTB47Q9UFB7 747 aaPredicted RBP27.18■■□□□ 1.94
EPCAM-202ENST00000405271 PDZRN3Q9UPQ7 1066 aa27.18■■□□□ 1.94
EPCAM-202ENST00000405271 CIAO1O76071 339 aa27.17■■□□□ 1.94
EPCAM-202ENST00000405271 CDC5LQ99459 802 aaKnown RBP27.17■■□□□ 1.94
EPCAM-202ENST00000405271 BRIP1Q9BX63 1249 aa27.17■■□□□ 1.94
EPCAM-202ENST00000405271 LRRCC1Q9C099 1032 aa27.17■■□□□ 1.94
EPCAM-202ENST00000405271 CRY2Q49AN0 593 aa27.16■■□□□ 1.94
EPCAM-202ENST00000405271 ANKRD45Q5TZF3 282 aa27.16■■□□□ 1.94
EPCAM-202ENST00000405271 KIF1BPQ96EK5 621 aa27.16■■□□□ 1.94
EPCAM-202ENST00000405271 SIL1Q9H173 461 aa27.16■■□□□ 1.94
EPCAM-202ENST00000405271 DALRD3Q5D0E6 543 aaKnown RBP27.16■■□□□ 1.94
EPCAM-202ENST00000405271 CHD1LQ86WJ1 897 aa27.16■■□□□ 1.94
EPCAM-202ENST00000405271 KLRG2A4D1S0 409 aaPredicted RBP27.15■■□□□ 1.94
EPCAM-202ENST00000405271 EYA2O00167 538 aa27.15■■□□□ 1.94
EPCAM-202ENST00000405271 ZNF594Q96JF6 807 aaPredicted RBP27.15■■□□□ 1.94
EPCAM-202ENST00000405271 CHD4Q14839 1912 aa27.14■■□□□ 1.94
EPCAM-202ENST00000405271 PDE6BP35913 854 aa27.14■■□□□ 1.94
EPCAM-202ENST00000405271 ZNF784Q8NCA9 323 aaPredicted RBP27.14■■□□□ 1.94
EPCAM-202ENST00000405271 RHPN1Q8TCX5 695 aa27.14■■□□□ 1.94
EPCAM-202ENST00000405271 BRCA1P38398 1863 aaKnown RBP27.14■■□□□ 1.93
EPCAM-202ENST00000405271 APBB1O00213 710 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms