RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 ATP6V1DQ9Y5K8 247 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 CHD4Q14839 1912 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 CYP27B1O15528 508 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 CPA1P15085 419 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 PSMA5P28066 241 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 ANKRD1Q15327 319 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 RGS22Q8NE09 1264 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.62□□□□□ -1.674e-6■■□□□ 11.4
RTN4-209ENST00000405240 ANP32BQ92688 251 aaKnown RBP4.62□□□□□ -1.67
RTN4-209ENST00000405240 JAKMIP1Q96N16 626 aaKnown RBP4.62□□□□□ -1.67
RTN4-209ENST00000405240 BCORQ6W2J9 1755 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 MYO5AQ9Y4I1 1855 aaKnown RBP4.62□□□□□ -1.67
RTN4-209ENST00000405240 NPM3O75607 178 aaKnown RBP4.62□□□□□ -1.67
RTN4-209ENST00000405240 SNRPA1P09661 255 aaKnown RBP4.62□□□□□ -1.67
RTN4-209ENST00000405240 NCLP19338 710 aaKnown RBP4.62□□□□□ -1.67
RTN4-209ENST00000405240 G3BP1Q13283 466 aaKnown RBP eCLIP4.62□□□□□ -1.673e-16■□□□□ 9.4
RTN4-209ENST00000405240 TNNI3KQ59H18 835 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 IFNL2Q8IZJ0 200 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 SMARCC2Q8TAQ2 1214 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 ZNF496Q96IT1 587 aaPredicted RBP4.62□□□□□ -1.67
RTN4-209ENST00000405240 DBNLQ9UJU6 430 aaKnown RBP4.62□□□□□ -1.67
RTN4-209ENST00000405240 SMC3Q9UQE7 1217 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 TAF6LQ9Y6J9 622 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 FPGT-TNNI3KV9GXZ4 949 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 NUP98P52948 1817 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 PHLPP1O60346 1717 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 SALL1Q9NSC2 1324 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 AP5Z1O43299 807 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 EVCP57679 992 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 CSPP1Q1MSJ5 1256 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 ATG9AQ7Z3C6 839 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 ZNF589Q86UQ0 364 aaPredicted RBP4.62□□□□□ -1.67
RTN4-209ENST00000405240 PLBD2Q8NHP8 589 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 XAGE3Q8WTP9 111 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 ATG3Q9NT62 314 aa4.62□□□□□ -1.67
RTN4-209ENST00000405240 TIAM2Q8IVF5 1701 aa4.61□□□□□ -1.67
RTN4-209ENST00000405240 SPATA31A3Q5VYP0 1347 aa4.61□□□□□ -1.67
RTN4-209ENST00000405240 KDM4AO75164 1064 aa4.61□□□□□ -1.67
RTN4-209ENST00000405240 GTF2F1P35269 517 aaKnown RBP eCLIP4.61□□□□□ -1.67
RTN4-209ENST00000405240 EXOSC10Q01780 885 aaKnown RBP4.61□□□□□ -1.67
RTN4-209ENST00000405240 ANKRD13DQ6ZTN6 518 aa4.61□□□□□ -1.67
RTN4-209ENST00000405240 COPS6Q7L5N1 327 aa4.61□□□□□ -1.67
RTN4-209ENST00000405240 CCDC83Q8IWF9 413 aa4.61□□□□□ -1.67
RTN4-209ENST00000405240 GDPD2Q9HCC8 539 aa4.61□□□□□ -1.67
RTN4-209ENST00000405240 USP25Q9UHP3 1055 aa4.61□□□□□ -1.67
RTN4-209ENST00000405240 COL5A2P05997 1499 aaPredicted RBP4.61□□□□□ -1.67
RTN4-209ENST00000405240 ADD1P35611 737 aaKnown RBP4.61□□□□□ -1.67
RTN4-209ENST00000405240 DNM1Q05193 864 aaKnown RBP4.61□□□□□ -1.67
RTN4-209ENST00000405240 NFATC2IPQ8NCF5 419 aa4.61□□□□□ -1.67
RTN4-209ENST00000405240 GTF3C6Q969F1 213 aa4.61□□□□□ -1.67
RTN4-209ENST00000405240 RBM33Q96EV2 1170 aaKnown RBP4.61□□□□□ -1.67
RTN4-209ENST00000405240 USP16Q9Y5T5 823 aa4.61□□□□□ -1.67
RTN4-209ENST00000405240 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.61□□□□□ -1.678e-9■■■□□ 15.2
RTN4-209ENST00000405240 ZNF831Q5JPB2 1677 aa4.61□□□□□ -1.67
RTN4-209ENST00000405240 NBPF26B4DH59 902 aa4.61□□□□□ -1.67
RTN4-209ENST00000405240 CIAO1O76071 339 aa4.61□□□□□ -1.67
RTN4-209ENST00000405240 ZKSCAN1P17029 563 aaPredicted RBP4.61□□□□□ -1.67
RTN4-209ENST00000405240 TATP17735 454 aaPredicted RBP4.61□□□□□ -1.67
RTN4-209ENST00000405240 MSNP26038 577 aaKnown RBP4.61□□□□□ -1.67
RTN4-209ENST00000405240 RESTQ13127 1097 aa4.61□□□□□ -1.67
RTN4-209ENST00000405240 KRT32Q14532 448 aa4.61□□□□□ -1.67
RTN4-209ENST00000405240 NBPF14Q5TI25 921 aa4.61□□□□□ -1.67
RTN4-209ENST00000405240 FOXD4L5Q5VV16 416 aaPredicted RBP4.61□□□□□ -1.67
RTN4-209ENST00000405240 NBPF10Q6P3W6 841 aaKnown RBP4.61□□□□□ -1.67
RTN4-209ENST00000405240 TTC6Q86TZ1 520 aa4.61□□□□□ -1.67
RTN4-209ENST00000405240 NBPF15Q8N660 670 aa4.61□□□□□ -1.67
RTN4-209ENST00000405240 FOXD4L4Q8WXT5 416 aaPredicted RBP4.61□□□□□ -1.67
RTN4-209ENST00000405240 PIBF1Q8WXW3 757 aa4.61□□□□□ -1.67
RTN4-209ENST00000405240 NAP1L5Q96NT1 182 aaPredicted RBP4.61□□□□□ -1.67
RTN4-209ENST00000405240 LLPHQ9BRT6 129 aaKnown RBP4.61□□□□□ -1.67
RTN4-209ENST00000405240 CCDC8Q9H0W5 538 aaPredicted RBP4.61□□□□□ -1.67
RTN4-209ENST00000405240 ABCC12Q96J65 1359 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 DLEC1Q9Y238 1755 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 SLC39A6Q13433 755 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 RNF20Q5VTR2 975 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 NOL8Q76FK4 1167 aaKnown RBP4.6□□□□□ -1.67
RTN4-209ENST00000405240 C14orf37Q86TY3 774 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 FMNL2Q96PY5 1086 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 HELLSQ9NRZ9 838 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 ATRNO75882 1429 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 PFKFB2O60825 505 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 PDCP20941 246 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 NEXNQ0ZGT2 675 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 TFCP2Q12800 502 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 OS9Q13438 667 aaPredicted RBP4.6□□□□□ -1.67
RTN4-209ENST00000405240 CDC37L1Q7L3B6 337 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 RIC3Q7Z5B4 369 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 MYD88Q99836 296 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 DSCC1Q9BVC3 393 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 U3KPZ7 1027 aaPredicted RBP4.6□□□□□ -1.67
RTN4-209ENST00000405240 ERVV-2B6SEH9 535 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 MCMDC2Q4G0Z9 681 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 ZMYM1Q5SVZ6 1142 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 BLOC1S2Q6QNY1 142 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 KLHDC4Q8TBB5 520 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 PLA2G12BQ9BX93 195 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 BOLA2Q9H3K6 86 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 MRVI1Q9Y6F6 885 aa4.6□□□□□ -1.67
RTN4-209ENST00000405240 CTDNEP1O95476 244 aa4.59□□□□□ -1.67
RTN4-209ENST00000405240 XPCQ01831 940 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms