RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 KLHL34Q8N239 644 aa19.63■□□□□ 0.73
CDPF1-204ENST00000404744 ANKRD44Q8N8A2 993 aa19.63■□□□□ 0.73
CDPF1-204ENST00000404744 RPGRQ92834 1020 aaKnown RBP19.63■□□□□ 0.73
CDPF1-204ENST00000404744 PPP1R1BQ9UD71 204 aaPredicted RBP19.63■□□□□ 0.73
CDPF1-204ENST00000404744 PDZRN3Q9UPQ7 1066 aa19.63■□□□□ 0.73
CDPF1-204ENST00000404744 IFIT5Q13325 482 aaKnown RBP19.62■□□□□ 0.73
CDPF1-204ENST00000404744 ANKRD18BA2A2Z9 1011 aa19.61■□□□□ 0.73
CDPF1-204ENST00000404744 H0YIN7 160 aa19.61■□□□□ 0.73
CDPF1-204ENST00000404744 TAF7LQ5H9L4 462 aa19.61■□□□□ 0.73
CDPF1-204ENST00000404744 DDX46Q7L014 1031 aaKnown RBP19.61■□□□□ 0.73
CDPF1-204ENST00000404744 PCDHB15Q9Y5E8 787 aa19.61■□□□□ 0.73
CDPF1-204ENST00000404744 DDX60Q8IY21 1712 aaKnown RBP19.61■□□□□ 0.73
CDPF1-204ENST00000404744 MTX1Q13505 466 aa19.61■□□□□ 0.73
CDPF1-204ENST00000404744 C3orf67Q6ZVT6 689 aa19.61■□□□□ 0.73
CDPF1-204ENST00000404744 C2CD5Q86YS7 1000 aa19.61■□□□□ 0.73
CDPF1-204ENST00000404744 RBM17Q96I25 401 aaKnown RBP19.61■□□□□ 0.73
CDPF1-204ENST00000404744 GREM2Q9H772 168 aa19.61■□□□□ 0.73
CDPF1-204ENST00000404744 LAMB2P55268 1798 aa19.6■□□□□ 0.73
CDPF1-204ENST00000404744 C10orf71Q711Q0 1435 aa19.6■□□□□ 0.73
CDPF1-204ENST00000404744 ITGA6P23229 1130 aa19.6■□□□□ 0.73
CDPF1-204ENST00000404744 FAM161AQ3B820 660 aa19.6■□□□□ 0.73
CDPF1-204ENST00000404744 PNMA6EA0A0J9YXQ4 647 aa19.59■□□□□ 0.73
CDPF1-204ENST00000404744 KLRG2A4D1S0 409 aaPredicted RBP19.59■□□□□ 0.73
CDPF1-204ENST00000404744 CDC5LQ99459 802 aaKnown RBP19.59■□□□□ 0.73
CDPF1-204ENST00000404744 RWDD1Q9H446 243 aaPredicted RBP19.59■□□□□ 0.73
CDPF1-204ENST00000404744 MYH3P11055 1940 aa19.58■□□□□ 0.73
CDPF1-204ENST00000404744 NPR1P16066 1061 aa19.58■□□□□ 0.73
CDPF1-204ENST00000404744 TGFB2P61812 414 aa19.58■□□□□ 0.73
CDPF1-204ENST00000404744 CRY2Q49AN0 593 aa19.58■□□□□ 0.73
CDPF1-204ENST00000404744 ZNF622Q969S3 477 aaKnown RBP eCLIP19.58■□□□□ 0.73
CDPF1-204ENST00000404744 MASTLQ96GX5 879 aa19.58■□□□□ 0.73
CDPF1-204ENST00000404744 CD2APQ9Y5K6 639 aa19.58■□□□□ 0.73
CDPF1-204ENST00000404744 SRGNP10124 158 aa19.57■□□□□ 0.72
CDPF1-204ENST00000404744 IGHMBP2P38935 993 aaKnown RBP19.57■□□□□ 0.72
CDPF1-204ENST00000404744 SSH3Q8TE77 659 aa19.57■□□□□ 0.72
CDPF1-204ENST00000404744 SEC31BQ9NQW1 1179 aa19.57■□□□□ 0.72
CDPF1-204ENST00000404744 RTL9Q8NET4 1388 aa19.57■□□□□ 0.72
CDPF1-204ENST00000404744 ALDH1B1P30837 517 aa19.56■□□□□ 0.72
CDPF1-204ENST00000404744 POLA2Q14181 598 aa19.56■□□□□ 0.72
CDPF1-204ENST00000404744 ANKRD18AQ8IVF6 992 aa19.56■□□□□ 0.72
CDPF1-204ENST00000404744 PPP4R2Q9NY27 417 aa19.56■□□□□ 0.72
CDPF1-204ENST00000404744 TNRC6CQ9HCJ0 1690 aaKnown RBP19.56■□□□□ 0.72
CDPF1-204ENST00000404744 CHRNA5P30532 468 aa19.56■□□□□ 0.72
CDPF1-204ENST00000404744 SIRT2Q8IXJ6 389 aa19.56■□□□□ 0.72
CDPF1-204ENST00000404744 CCDC136Q96JN2 1154 aa19.56■□□□□ 0.72
CDPF1-204ENST00000404744 MPHOSPH8Q99549 860 aa19.56■□□□□ 0.72
CDPF1-204ENST00000404744 HOXA10P31260 410 aaPredicted RBP19.55■□□□□ 0.72
CDPF1-204ENST00000404744 HDAC1Q13547 482 aaPredicted RBP19.55■□□□□ 0.72
CDPF1-204ENST00000404744 GRAPQ13588 217 aa19.55■□□□□ 0.72
CDPF1-204ENST00000404744 STYK1Q6J9G0 422 aa19.55■□□□□ 0.72
CDPF1-204ENST00000404744 GRAPLQ8TC17 118 aaPredicted RBP19.55■□□□□ 0.72
CDPF1-204ENST00000404744 CRAMP1Q96RY5 1269 aa19.55■□□□□ 0.72
CDPF1-204ENST00000404744 ANKRD31Q8N7Z5 1873 aa19.55■□□□□ 0.72
CDPF1-204ENST00000404744 SURF6O75683 361 aaKnown RBP19.54■□□□□ 0.72
CDPF1-204ENST00000404744 RFX5P48382 616 aaPredicted RBP19.54■□□□□ 0.72
CDPF1-204ENST00000404744 RPS8P62241 208 aaKnown RBP19.54■□□□□ 0.72
CDPF1-204ENST00000404744 G3BP1Q13283 466 aaKnown RBP eCLIP19.54■□□□□ 0.72
CDPF1-204ENST00000404744 CNKSR1Q969H4 720 aa19.54■□□□□ 0.72
CDPF1-204ENST00000404744 ZNF594Q96JF6 807 aaPredicted RBP19.54■□□□□ 0.72
CDPF1-204ENST00000404744 A0A0G2JLW4 131 aa19.53■□□□□ 0.72
CDPF1-204ENST00000404744 DPEP1P16444 411 aa19.53■□□□□ 0.72
CDPF1-204ENST00000404744 PTPN12Q05209 780 aaKnown RBP19.53■□□□□ 0.72
CDPF1-204ENST00000404744 OS9Q13438 667 aaPredicted RBP19.53■□□□□ 0.72
CDPF1-204ENST00000404744 HSP90AB4PQ58FF6 505 aa19.53■□□□□ 0.72
CDPF1-204ENST00000404744 LDHAL6AQ6ZMR3 332 aa19.53■□□□□ 0.72
CDPF1-204ENST00000404744 KLHDC4Q8TBB5 520 aa19.53■□□□□ 0.72
CDPF1-204ENST00000404744 SIL1Q9H173 461 aa19.53■□□□□ 0.72
CDPF1-204ENST00000404744 COPRSQ9NQ92 184 aa19.53■□□□□ 0.72
CDPF1-204ENST00000404744 CNNM1Q9NRU3 951 aa19.53■□□□□ 0.72
CDPF1-204ENST00000404744 PA2G4Q9UQ80 394 aaKnown RBP19.53■□□□□ 0.72
CDPF1-204ENST00000404744 GTF3C3Q9Y5Q9 886 aa19.53■□□□□ 0.72
CDPF1-204ENST00000404744 BBOX1O75936 387 aa19.52■□□□□ 0.72
CDPF1-204ENST00000404744 CELF1Q92879 486 aaKnown RBP19.52■□□□□ 0.72
CDPF1-204ENST00000404744 TMX4Q9H1E5 349 aaPredicted RBP19.52■□□□□ 0.72
CDPF1-204ENST00000404744 FHDC1Q9C0D6 1143 aaPredicted RBP19.51■□□□□ 0.71
CDPF1-204ENST00000404744 FBXO3Q9UK99 471 aa19.51■□□□□ 0.71
CDPF1-204ENST00000404744 PIM2Q9P1W9 311 aa19.51■□□□□ 0.71
CDPF1-204ENST00000404744 KIF13BQ9NQT8 1826 aa19.5■□□□□ 0.71
CDPF1-204ENST00000404744 EYA2O00167 538 aa19.5■□□□□ 0.71
CDPF1-204ENST00000404744 IGHDP01880 384 aa19.5■□□□□ 0.71
CDPF1-204ENST00000404744 TMC4Q7Z404 712 aa19.5■□□□□ 0.71
CDPF1-204ENST00000404744 TTLL6Q8N841 843 aa19.5■□□□□ 0.71
CDPF1-204ENST00000404744 GCC1Q96CN9 775 aa19.5■□□□□ 0.71
CDPF1-204ENST00000404744 DCTPP1Q9H773 170 aa19.5■□□□□ 0.71
CDPF1-204ENST00000404744 BSDC1Q9NW68 430 aaPredicted RBP19.5■□□□□ 0.71
CDPF1-204ENST00000404744 EXOC6BQ9Y2D4 811 aa19.5■□□□□ 0.71
CDPF1-204ENST00000404744 NOP58Q9Y2X3 529 aaKnown RBP19.5■□□□□ 0.71
CDPF1-204ENST00000404744 PPEF1O14829 653 aaPredicted RBP19.49■□□□□ 0.71
CDPF1-204ENST00000404744 CIAO1O76071 339 aa19.49■□□□□ 0.71
CDPF1-204ENST00000404744 ZBTB47Q9UFB7 747 aaPredicted RBP19.49■□□□□ 0.71
CDPF1-204ENST00000404744 RAB11FIP3O75154 756 aa19.48■□□□□ 0.71
CDPF1-204ENST00000404744 IL15P40933 162 aaPredicted RBP19.48■□□□□ 0.71
CDPF1-204ENST00000404744 B4GALNT3Q6L9W6 998 aa19.48■□□□□ 0.71
CDPF1-204ENST00000404744 ERC1Q8IUD2 1116 aa19.48■□□□□ 0.71
CDPF1-204ENST00000404744 APBB1O00213 710 aa19.47■□□□□ 0.71
CDPF1-204ENST00000404744 COL11A2P13942 1736 aaPredicted RBP19.47■□□□□ 0.71
CDPF1-204ENST00000404744 KCNA3P22001 575 aa19.47■□□□□ 0.71
CDPF1-204ENST00000404744 LRRC24Q50LG9 513 aa19.47■□□□□ 0.71
CDPF1-204ENST00000404744 PUS3Q9BZE2 481 aaKnown RBP19.47■□□□□ 0.71
CDPF1-204ENST00000404744 DALRD3Q5D0E6 543 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms