RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 LAMB2P55268 1798 aa23.19■■□□□ 1.3
PTPRN2-204ENST00000404321 DPY19L2Q6NUT2 758 aa23.19■■□□□ 1.3
PTPRN2-204ENST00000404321 DDX60Q8IY21 1712 aaKnown RBP23.19■■□□□ 1.3
PTPRN2-204ENST00000404321 DDNO94850 711 aaPredicted RBP23.18■■□□□ 1.3
PTPRN2-204ENST00000404321 SP8Q8IXZ3 490 aa23.17■■□□□ 1.3
PTPRN2-204ENST00000404321 C16orf71Q8IYS4 520 aaPredicted RBP23.17■■□□□ 1.3
PTPRN2-204ENST00000404321 SEC31BQ9NQW1 1179 aa23.17■■□□□ 1.3
PTPRN2-204ENST00000404321 CCDC88AQ3V6T2 1871 aa23.17■■□□□ 1.3
PTPRN2-204ENST00000404321 ZNF541Q9H0D2 1346 aa23.16■■□□□ 1.3
PTPRN2-204ENST00000404321 PDE8AO60658 829 aa23.16■■□□□ 1.3
PTPRN2-204ENST00000404321 HSP90B1P14625 803 aaKnown RBP23.16■■□□□ 1.3
PTPRN2-204ENST00000404321 DPP8Q6V1X1 898 aaPredicted RBP23.16■■□□□ 1.3
PTPRN2-204ENST00000404321 UBE3BQ7Z3V4 1068 aa23.16■■□□□ 1.3
PTPRN2-204ENST00000404321 GCKRQ14397 625 aa23.15■■□□□ 1.3
PTPRN2-204ENST00000404321 GRIPAP1Q4V328 841 aa23.15■■□□□ 1.3
PTPRN2-204ENST00000404321 LARGE2Q8N3Y3 721 aa23.15■■□□□ 1.3
PTPRN2-204ENST00000404321 COL4A1P02462 1669 aa23.15■■□□□ 1.3
PTPRN2-204ENST00000404321 CDHR2Q9BYE9 1310 aa23.15■■□□□ 1.3
PTPRN2-204ENST00000404321 TOMM70O94826 608 aa23.14■■□□□ 1.3
PTPRN2-204ENST00000404321 CCDC152Q4G0S7 254 aa23.14■■□□□ 1.3
PTPRN2-204ENST00000404321 MPNDQ8N594 471 aa23.14■■□□□ 1.3
PTPRN2-204ENST00000404321 LINS1Q8NG48 757 aa23.14■■□□□ 1.3
PTPRN2-204ENST00000404321 JDP2Q8WYK2 163 aa23.14■■□□□ 1.3
PTPRN2-204ENST00000404321 PPIP5K2O43314 1243 aa23.14■■□□□ 1.29
PTPRN2-204ENST00000404321 VEGFAP15692 232 aaPredicted RBP23.14■■□□□ 1.29
PTPRN2-204ENST00000404321 AOC3Q16853 763 aa23.14■■□□□ 1.29
PTPRN2-204ENST00000404321 BCL2L13Q9BXK5 485 aa23.14■■□□□ 1.29
PTPRN2-204ENST00000404321 COL4A5P29400 1685 aa23.13■■□□□ 1.29
PTPRN2-204ENST00000404321 POTECB2RU33 542 aa23.13■■□□□ 1.29
PTPRN2-204ENST00000404321 H7C1W4 665 aa23.13■■□□□ 1.29
PTPRN2-204ENST00000404321 CTSWP56202 376 aa23.13■■□□□ 1.29
PTPRN2-204ENST00000404321 RPS8P62241 208 aaKnown RBP23.13■■□□□ 1.29
PTPRN2-204ENST00000404321 SLC4A10Q6U841 1118 aa23.13■■□□□ 1.29
PTPRN2-204ENST00000404321 BEND3Q5T5X7 828 aa23.12■■□□□ 1.29
PTPRN2-204ENST00000404321 TMC4Q7Z404 712 aa23.12■■□□□ 1.29
PTPRN2-204ENST00000404321 MRPL50Q8N5N7 158 aaKnown RBP23.12■■□□□ 1.29
PTPRN2-204ENST00000404321 TAF1P21675 1872 aa23.12■■□□□ 1.29
PTPRN2-204ENST00000404321 FZD9O00144 591 aa23.11■■□□□ 1.29
PTPRN2-204ENST00000404321 SUPT20HQ8NEM7 779 aa23.11■■□□□ 1.29
PTPRN2-204ENST00000404321 SSH1Q8WYL5 1049 aa23.11■■□□□ 1.29
PTPRN2-204ENST00000404321 NSFL1CQ9UNZ2 370 aaKnown RBP23.11■■□□□ 1.29
PTPRN2-204ENST00000404321 GPSM2P81274 684 aa23.1■■□□□ 1.29
PTPRN2-204ENST00000404321 NIM1KQ8IY84 436 aa23.1■■□□□ 1.29
PTPRN2-204ENST00000404321 TRMT2AQ8IZ69 625 aaKnown RBP23.1■■□□□ 1.29
PTPRN2-204ENST00000404321 RTFDC1Q9BY42 306 aaPredicted RBP23.1■■□□□ 1.29
PTPRN2-204ENST00000404321 DICER1Q9UPY3 1922 aaKnown RBP23.09■■□□□ 1.29
PTPRN2-204ENST00000404321 CASP7P55210 303 aa23.09■■□□□ 1.29
PTPRN2-204ENST00000404321 TTLL11Q8NHH1 800 aa23.09■■□□□ 1.29
PTPRN2-204ENST00000404321 RBM46Q8TBY0 533 aaKnown RBP23.09■■□□□ 1.29
PTPRN2-204ENST00000404321 GREM2Q9H772 168 aa23.09■■□□□ 1.29
PTPRN2-204ENST00000404321 GJA3Q9Y6H8 435 aa23.09■■□□□ 1.29
PTPRN2-204ENST00000404321 EIF6P56537 245 aaKnown RBP23.08■■□□□ 1.29
PTPRN2-204ENST00000404321 ANKRD18AQ8IVF6 992 aa23.07■■□□□ 1.28
PTPRN2-204ENST00000404321 GPR101Q96P66 508 aaPredicted RBP23.07■■□□□ 1.28
PTPRN2-204ENST00000404321 C6orf229H3BNL8 230 aa23.06■■□□□ 1.28
PTPRN2-204ENST00000404321 HNRNPUQ00839 825 aaKnown RBP eCLIP23.06■■□□□ 1.28
PTPRN2-204ENST00000404321 SMC4Q9NTJ3 1288 aa23.06■■□□□ 1.28
PTPRN2-204ENST00000404321 RIMBP2O15034 1052 aa23.05■■□□□ 1.28
PTPRN2-204ENST00000404321 HSPA6P17066 643 aa23.05■■□□□ 1.28
PTPRN2-204ENST00000404321 KIAA2012Q0VF49 1180 aa23.05■■□□□ 1.28
PTPRN2-204ENST00000404321 SRCIN1Q9C0H9 1055 aa23.05■■□□□ 1.28
PTPRN2-204ENST00000404321 POLLQ9UGP5 575 aa23.05■■□□□ 1.28
PTPRN2-204ENST00000404321 DUOX1Q9NRD9 1551 aa23.04■■□□□ 1.28
PTPRN2-204ENST00000404321 FAM161AQ3B820 660 aa23.04■■□□□ 1.28
PTPRN2-204ENST00000404321 GPC2Q8N158 579 aa23.04■■□□□ 1.28
PTPRN2-204ENST00000404321 L3MBTL3Q96JM7 780 aaPredicted RBP23.04■■□□□ 1.28
PTPRN2-204ENST00000404321 CDC5LQ99459 802 aaKnown RBP23.04■■□□□ 1.28
PTPRN2-204ENST00000404321 VPS33BQ9H267 617 aa23.04■■□□□ 1.28
PTPRN2-204ENST00000404321 ANKIB1Q9P2G1 1089 aa23.04■■□□□ 1.28
PTPRN2-204ENST00000404321 WDR90Q96KV7 1748 aa23.04■■□□□ 1.28
PTPRN2-204ENST00000404321 WASHC4Q2M389 1173 aa23.03■■□□□ 1.28
PTPRN2-204ENST00000404321 TBC1D16Q8TBP0 767 aa23.03■■□□□ 1.28
PTPRN2-204ENST00000404321 PLA2G12BQ9BX93 195 aa23.03■■□□□ 1.28
PTPRN2-204ENST00000404321 ZNRF3Q9ULT6 936 aa23.03■■□□□ 1.28
PTPRN2-204ENST00000404321 POTEIP0CG38 1075 aa23.02■■□□□ 1.28
PTPRN2-204ENST00000404321 POTEJP0CG39 1038 aa23.02■■□□□ 1.28
PTPRN2-204ENST00000404321 SMC1BQ8NDV3 1235 aa23.02■■□□□ 1.28
PTPRN2-204ENST00000404321 C9orf78Q9NZ63 289 aaPredicted RBP23.02■■□□□ 1.28
PTPRN2-204ENST00000404321 LRRC37AA6NMS7 1700 aa23.02■■□□□ 1.28
PTPRN2-204ENST00000404321 CACNA1FO60840 1977 aa23.02■■□□□ 1.28
PTPRN2-204ENST00000404321 IQCA1LA6NCM1 817 aa23.01■■□□□ 1.27
PTPRN2-204ENST00000404321 GRM8O00222 908 aa23.01■■□□□ 1.27
PTPRN2-204ENST00000404321 ALDH1L1O75891 902 aa23.01■■□□□ 1.27
PTPRN2-204ENST00000404321 UFL1O94874 794 aa23.01■■□□□ 1.27
PTPRN2-204ENST00000404321 ITGA6P23229 1130 aa23.01■■□□□ 1.27
PTPRN2-204ENST00000404321 FSTL1Q12841 308 aa23.01■■□□□ 1.27
PTPRN2-204ENST00000404321 ALDH1L2Q3SY69 923 aa23.01■■□□□ 1.27
PTPRN2-204ENST00000404321 TAF1DQ9H5J8 278 aaPredicted RBP23.01■■□□□ 1.27
PTPRN2-204ENST00000404321 PTPRCP08575 1304 aa23.01■■□□□ 1.27
PTPRN2-204ENST00000404321 DBNDD1Q9H9R9 158 aa23.01■■□□□ 1.27
PTPRN2-204ENST00000404321 HACL1Q9UJ83 578 aa23.01■■□□□ 1.27
PTPRN2-204ENST00000404321 CHMP3Q9Y3E7 222 aa23.01■■□□□ 1.27
PTPRN2-204ENST00000404321 RTL9Q8NET4 1388 aa23■■□□□ 1.27
PTPRN2-204ENST00000404321 RAD17O75943 681 aa23■■□□□ 1.27
PTPRN2-204ENST00000404321 CSF1RP07333 972 aa23■■□□□ 1.27
PTPRN2-204ENST00000404321 FOXO4P98177 505 aa23■■□□□ 1.27
PTPRN2-204ENST00000404321 CXCL9Q07325 125 aa23■■□□□ 1.27
PTPRN2-204ENST00000404321 DOK7Q18PE1 504 aa23■■□□□ 1.27
PTPRN2-204ENST00000404321 EAPPQ56P03 285 aaPredicted RBP23■■□□□ 1.27
PTPRN2-204ENST00000404321 EPHA10Q5JZY3 1008 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 179.5 ms