RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 CNTN3Q9P232 1028 aa8.52□□□□□ -1.05
HMGB3P19-201ENST00000403971 ERBB4Q15303 1308 aa8.52□□□□□ -1.05
HMGB3P19-201ENST00000403971 TERTO14746 1132 aaKnown RBP8.51□□□□□ -1.05
HMGB3P19-201ENST00000403971 USPL1Q5W0Q7 1092 aa8.51□□□□□ -1.05
HMGB3P19-201ENST00000403971 FBXO33Q7Z6M2 555 aa8.51□□□□□ -1.05
HMGB3P19-201ENST00000403971 NLRP13Q86W25 1043 aa8.51□□□□□ -1.05
HMGB3P19-201ENST00000403971 WWC3Q9ULE0 1092 aa8.51□□□□□ -1.05
HMGB3P19-201ENST00000403971 RARAP10276 462 aa8.5□□□□□ -1.05
HMGB3P19-201ENST00000403971 NPAS3Q8IXF0 933 aa8.5□□□□□ -1.05
HMGB3P19-201ENST00000403971 C1orf127Q8N9H9 656 aa8.5□□□□□ -1.05
HMGB3P19-201ENST00000403971 GIPC2Q8TF65 315 aa8.5□□□□□ -1.05
HMGB3P19-201ENST00000403971 PNMA5Q96PV4 448 aa8.5□□□□□ -1.05
HMGB3P19-201ENST00000403971 C11orf16Q9NQ32 467 aa8.5□□□□□ -1.05
HMGB3P19-201ENST00000403971 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.5□□□□□ -1.05
HMGB3P19-201ENST00000403971 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.5□□□□□ -1.05
HMGB3P19-201ENST00000403971 PNMA6FA0A0J9YX94 578 aa8.49□□□□□ -1.05
HMGB3P19-201ENST00000403971 EIF1AYO14602 144 aaKnown RBP8.49□□□□□ -1.05
HMGB3P19-201ENST00000403971 MMP20O60882 483 aa8.49□□□□□ -1.05
HMGB3P19-201ENST00000403971 CYP2E1P05181 493 aaPredicted RBP8.49□□□□□ -1.05
HMGB3P19-201ENST00000403971 BMP4P12644 408 aa8.49□□□□□ -1.05
HMGB3P19-201ENST00000403971 MX2P20592 715 aa8.49□□□□□ -1.05
HMGB3P19-201ENST00000403971 EAPPQ56P03 285 aaPredicted RBP8.49□□□□□ -1.05
HMGB3P19-201ENST00000403971 RNFT1Q5M7Z0 435 aa8.49□□□□□ -1.05
HMGB3P19-201ENST00000403971 FAM182BQ5T319 152 aa8.49□□□□□ -1.05
HMGB3P19-201ENST00000403971 SNX29Q8TEQ0 813 aa8.49□□□□□ -1.05
HMGB3P19-201ENST00000403971 CSRNP1Q96S65 589 aa8.49□□□□□ -1.05
HMGB3P19-201ENST00000403971 CHRDQ9H2X0 955 aa8.49□□□□□ -1.05
HMGB3P19-201ENST00000403971 ABI2Q9NYB9 513 aaPredicted RBP8.49□□□□□ -1.05
HMGB3P19-201ENST00000403971 PHACTR2O75167 634 aa8.48□□□□□ -1.05
HMGB3P19-201ENST00000403971 POLR3DP05423 398 aaPredicted RBP8.48□□□□□ -1.05
HMGB3P19-201ENST00000403971 VSIG8P0DPA2 414 aa8.48□□□□□ -1.05
HMGB3P19-201ENST00000403971 TTC39BQ5VTQ0 682 aaPredicted RBP8.48□□□□□ -1.05
HMGB3P19-201ENST00000403971 COL25A1Q9BXS0 654 aaPredicted RBP8.48□□□□□ -1.05
HMGB3P19-201ENST00000403971 RNF19AQ9NV58 838 aa8.48□□□□□ -1.05
HMGB3P19-201ENST00000403971 PRR12Q9ULL5 1215 aa8.48□□□□□ -1.05
HMGB3P19-201ENST00000403971 EREGO14944 169 aa8.47□□□□□ -1.05
HMGB3P19-201ENST00000403971 LDHBP07195 334 aaKnown RBP8.47□□□□□ -1.05
HMGB3P19-201ENST00000403971 ZNF16P17020 682 aaPredicted RBP8.47□□□□□ -1.05
HMGB3P19-201ENST00000403971 COL19A1Q14993 1142 aa8.47□□□□□ -1.05
HMGB3P19-201ENST00000403971 ENOX2Q16206 610 aaKnown RBP8.47□□□□□ -1.05
HMGB3P19-201ENST00000403971 ZFYVE28Q9HCC9 887 aa8.47□□□□□ -1.05
HMGB3P19-201ENST00000403971 KANSL3Q9P2N6 904 aa8.47□□□□□ -1.05
HMGB3P19-201ENST00000403971 AMOTL2Q9Y2J4 779 aa8.47□□□□□ -1.05
HMGB3P19-201ENST00000403971 RBM47A0AV96 593 aaKnown RBP8.46□□□□□ -1.06
HMGB3P19-201ENST00000403971 CPNE3O75131 537 aaKnown RBP8.46□□□□□ -1.06
HMGB3P19-201ENST00000403971 RBM25P49756 843 aaKnown RBP8.46□□□□□ -1.06
HMGB3P19-201ENST00000403971 PCBP4P57723 403 aaKnown RBP8.46□□□□□ -1.06
HMGB3P19-201ENST00000403971 KRT76Q01546 638 aa8.46□□□□□ -1.06
HMGB3P19-201ENST00000403971 NFX1Q12986 1120 aaKnown RBP8.46□□□□□ -1.06
HMGB3P19-201ENST00000403971 LCE2CQ5TA81 110 aa8.46□□□□□ -1.06
HMGB3P19-201ENST00000403971 SYT9Q86SS6 491 aa8.46□□□□□ -1.06
HMGB3P19-201ENST00000403971 SLC16A10Q8TF71 515 aa8.46□□□□□ -1.06
HMGB3P19-201ENST00000403971 IGFLR1Q9H665 355 aa8.46□□□□□ -1.06
HMGB3P19-201ENST00000403971 KLF15Q9UIH9 416 aa8.46□□□□□ -1.06
HMGB3P19-201ENST00000403971 UNCXA6NJT0 531 aa8.45□□□□□ -1.06
HMGB3P19-201ENST00000403971 TBC1D8BQ0IIM8 1120 aa8.45□□□□□ -1.06
HMGB3P19-201ENST00000403971 ZNF468Q5VIY5 522 aaPredicted RBP8.45□□□□□ -1.06
HMGB3P19-201ENST00000403971 OR13H1Q8NG92 308 aa8.45□□□□□ -1.06
HMGB3P19-201ENST00000403971 MBIPQ9NS73 344 aa8.45□□□□□ -1.06
HMGB3P19-201ENST00000403971 TLR7Q9NYK1 1049 aaKnown RBP8.45□□□□□ -1.06
HMGB3P19-201ENST00000403971 MAP3K6O95382 1288 aa8.44□□□□□ -1.06
HMGB3P19-201ENST00000403971 NEFLP07196 543 aa8.44□□□□□ -1.06
HMGB3P19-201ENST00000403971 CES1P23141 567 aa8.44□□□□□ -1.06
HMGB3P19-201ENST00000403971 IRS1P35568 1242 aa8.44□□□□□ -1.06
HMGB3P19-201ENST00000403971 MLLT1Q03111 559 aaPredicted RBP8.44□□□□□ -1.06
HMGB3P19-201ENST00000403971 COL13A1Q5TAT6 717 aaPredicted RBP8.44□□□□□ -1.06
HMGB3P19-201ENST00000403971 PI16Q6UXB8 463 aa8.44□□□□□ -1.06
HMGB3P19-201ENST00000403971 DHX32Q7L7V1 743 aaKnown RBP8.44□□□□□ -1.06
HMGB3P19-201ENST00000403971 CNTNAP3BQ96NU0 1288 aa8.44□□□□□ -1.06
HMGB3P19-201ENST00000403971 CNTNAP3Q9BZ76 1288 aa8.44□□□□□ -1.06
HMGB3P19-201ENST00000403971 IGF1RP08069 1367 aa8.44□□□□□ -1.06
HMGB3P19-201ENST00000403971 PSAPP07602 524 aa8.43□□□□□ -1.06
HMGB3P19-201ENST00000403971 NEUROD1Q13562 356 aa8.43□□□□□ -1.06
HMGB3P19-201ENST00000403971 IRF7Q92985 503 aa8.43□□□□□ -1.06
HMGB3P19-201ENST00000403971 CCDC74AQ96AQ1 378 aa8.43□□□□□ -1.06
HMGB3P19-201ENST00000403971 NSUN5Q96P11 429 aaKnown RBP8.43□□□□□ -1.06
HMGB3P19-201ENST00000403971 DUSP9Q99956 384 aaKnown RBP8.43□□□□□ -1.06
HMGB3P19-201ENST00000403971 DNAJC25Q9H1X3 360 aa8.43□□□□□ -1.06
HMGB3P19-201ENST00000403971 LATS2Q9NRM7 1088 aa8.43□□□□□ -1.06
HMGB3P19-201ENST00000403971 ZBTB42B2RXF5 422 aa8.42□□□□□ -1.06
HMGB3P19-201ENST00000403971 ACPPP15309 386 aa8.42□□□□□ -1.06
HMGB3P19-201ENST00000403971 ATP2B2Q01814 1243 aa8.42□□□□□ -1.06
HMGB3P19-201ENST00000403971 HFE2Q6ZVN8 426 aa8.42□□□□□ -1.06
HMGB3P19-201ENST00000403971 EPS8L3Q8TE67 593 aaKnown RBP8.42□□□□□ -1.06
HMGB3P19-201ENST00000403971 FAM161BQ96MY7 647 aa8.42□□□□□ -1.06
HMGB3P19-201ENST00000403971 UBE2OQ9C0C9 1292 aaKnown RBP8.42□□□□□ -1.06
HMGB3P19-201ENST00000403971 EFCC1Q9HA90 598 aa8.42□□□□□ -1.06
HMGB3P19-201ENST00000403971 NEURL1BA8MQ27 555 aa8.41□□□□□ -1.06
HMGB3P19-201ENST00000403971 PHF20L1A8MW92 1017 aa8.41□□□□□ -1.06
HMGB3P19-201ENST00000403971 PRPF40AO75400 957 aaKnown RBP8.41□□□□□ -1.06
HMGB3P19-201ENST00000403971 PLAURQ03405 335 aa8.41□□□□□ -1.06
HMGB3P19-201ENST00000403971 ZNF326Q5BKZ1 582 aaKnown RBP8.41□□□□□ -1.06
HMGB3P19-201ENST00000403971 NPM2Q86SE8 214 aaKnown RBP8.41□□□□□ -1.06
HMGB3P19-201ENST00000403971 ZNF775Q96BV0 537 aaPredicted RBP8.41□□□□□ -1.06
HMGB3P19-201ENST00000403971 NPHS2Q9NP85 383 aa8.41□□□□□ -1.06
HMGB3P19-201ENST00000403971 DNAJB12Q9NXW2 375 aaKnown RBP8.41□□□□□ -1.06
HMGB3P19-201ENST00000403971 J3QW42 95 aa8.4□□□□□ -1.06
HMGB3P19-201ENST00000403971 SIN3BO75182 1162 aa8.4□□□□□ -1.06
HMGB3P19-201ENST00000403971 ARAFP10398 606 aa8.4□□□□□ -1.06
HMGB3P19-201ENST00000403971 MAP2K3P46734 347 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms