RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 GTPBP3Q969Y2 492 aaKnown RBP6.39□□□□□ -1.39
HMGB1P17-201ENST00000403495 CCDC74AQ96AQ1 378 aa6.39□□□□□ -1.39
HMGB1P17-201ENST00000403495 ZFYVE28Q9HCC9 887 aa6.39□□□□□ -1.39
HMGB1P17-201ENST00000403495 MRS2Q9HD23 443 aa6.39□□□□□ -1.39
HMGB1P17-201ENST00000403495 LATS2Q9NRM7 1088 aa6.39□□□□□ -1.39
HMGB1P17-201ENST00000403495 FNDC3AQ9Y2H6 1198 aaKnown RBP6.39□□□□□ -1.39
HMGB1P17-201ENST00000403495 POTECB2RU33 542 aa6.38□□□□□ -1.39
HMGB1P17-201ENST00000403495 EFSO43281 561 aa6.38□□□□□ -1.39
HMGB1P17-201ENST00000403495 RPLP1P05386 114 aaKnown RBP6.38□□□□□ -1.39
HMGB1P17-201ENST00000403495 TCF3P15923 654 aa6.38□□□□□ -1.39
HMGB1P17-201ENST00000403495 TNP2Q05952 138 aa6.38□□□□□ -1.39
HMGB1P17-201ENST00000403495 ALG1LQ6GMV1 187 aa6.38□□□□□ -1.39
HMGB1P17-201ENST00000403495 PDE12Q6L8Q7 609 aaKnown RBP6.38□□□□□ -1.39
HMGB1P17-201ENST00000403495 XKR5Q6UX68 686 aa6.38□□□□□ -1.39
HMGB1P17-201ENST00000403495 TMC4Q7Z404 712 aa6.38□□□□□ -1.39
HMGB1P17-201ENST00000403495 ZNF837Q96EG3 531 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P17-201ENST00000403495 TRIM47Q96LD4 638 aa6.38□□□□□ -1.39
HMGB1P17-201ENST00000403495 SLC30A3Q99726 388 aa6.38□□□□□ -1.39
HMGB1P17-201ENST00000403495 NPHS2Q9NP85 383 aa6.38□□□□□ -1.39
HMGB1P17-201ENST00000403495 ABI2Q9NYB9 513 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P17-201ENST00000403495 ZFATQ9P243 1243 aa6.38□□□□□ -1.39
HMGB1P17-201ENST00000403495 PCDHGC4Q9Y5F7 938 aa6.38□□□□□ -1.39
HMGB1P17-201ENST00000403495 CDC14CA4D256 554 aa6.37□□□□□ -1.39
HMGB1P17-201ENST00000403495 SORBS3O60504 671 aa6.37□□□□□ -1.39
HMGB1P17-201ENST00000403495 FAM157BP0CG42 384 aa6.37□□□□□ -1.39
HMGB1P17-201ENST00000403495 NFKB1P19838 968 aa6.37□□□□□ -1.39
HMGB1P17-201ENST00000403495 ITGA6P23229 1130 aa6.37□□□□□ -1.39
HMGB1P17-201ENST00000403495 VAMP1P23763 118 aa6.37□□□□□ -1.39
HMGB1P17-201ENST00000403495 GNA15P30679 374 aa6.37□□□□□ -1.39
HMGB1P17-201ENST00000403495 LAPTM4AQ15012 233 aa6.37□□□□□ -1.39
HMGB1P17-201ENST00000403495 NLRP13Q86W25 1043 aa6.37□□□□□ -1.39
HMGB1P17-201ENST00000403495 TMEM87AQ8NBN3 555 aa6.37□□□□□ -1.39
HMGB1P17-201ENST00000403495 GSX2Q9BZM3 304 aa6.37□□□□□ -1.39
HMGB1P17-201ENST00000403495 MMP20O60882 483 aa6.36□□□□□ -1.39
HMGB1P17-201ENST00000403495 EGFRP00533 1210 aa6.36□□□□□ -1.39
HMGB1P17-201ENST00000403495 ACPPP15309 386 aa6.36□□□□□ -1.39
HMGB1P17-201ENST00000403495 TTC39BQ5VTQ0 682 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P17-201ENST00000403495 FIGNL1Q6PIW4 674 aa6.36□□□□□ -1.39
HMGB1P17-201ENST00000403495 Q6ZNB5 142 aa6.36□□□□□ -1.39
HMGB1P17-201ENST00000403495 TRIM22Q8IYM9 498 aa6.36□□□□□ -1.39
HMGB1P17-201ENST00000403495 BHMTQ93088 406 aa6.36□□□□□ -1.39
HMGB1P17-201ENST00000403495 OSBPL7Q9BZF2 842 aa6.36□□□□□ -1.39
HMGB1P17-201ENST00000403495 DNAJC25Q9H1X3 360 aa6.36□□□□□ -1.39
HMGB1P17-201ENST00000403495 SENP2Q9HC62 589 aa6.36□□□□□ -1.39
HMGB1P17-201ENST00000403495 NDFIP2Q9NV92 336 aa6.36□□□□□ -1.39
HMGB1P17-201ENST00000403495 TRPA1O75762 1119 aa6.35□□□□□ -1.39
HMGB1P17-201ENST00000403495 NEFLP07196 543 aa6.35□□□□□ -1.39
HMGB1P17-201ENST00000403495 CTSHP09668 335 aa6.35□□□□□ -1.39
HMGB1P17-201ENST00000403495 RARAP10276 462 aa6.35□□□□□ -1.39
HMGB1P17-201ENST00000403495 CES1P23141 567 aa6.35□□□□□ -1.39
HMGB1P17-201ENST00000403495 VEGFBP49765 207 aa6.35□□□□□ -1.39
HMGB1P17-201ENST00000403495 KCNQ4P56696 695 aa6.35□□□□□ -1.39
HMGB1P17-201ENST00000403495 SPEM2Q0P670 501 aa6.35□□□□□ -1.39
HMGB1P17-201ENST00000403495 CCINQ13939 588 aa6.35□□□□□ -1.39
HMGB1P17-201ENST00000403495 COL13A1Q5TAT6 717 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P17-201ENST00000403495 VWA5B2Q8N398 1253 aa6.35□□□□□ -1.39
HMGB1P17-201ENST00000403495 KIFC2Q96AC6 838 aa6.35□□□□□ -1.39
HMGB1P17-201ENST00000403495 C11orf95C9JLR9 678 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P17-201ENST00000403495 H7C1W4 665 aa6.34□□□□□ -1.39
HMGB1P17-201ENST00000403495 GADD45BO75293 160 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P17-201ENST00000403495 HDLBPQ00341 1268 aaKnown RBP6.34□□□□□ -1.39
HMGB1P17-201ENST00000403495 CTBSQ01459 385 aa6.34□□□□□ -1.39
HMGB1P17-201ENST00000403495 MLLT1Q03111 559 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P17-201ENST00000403495 LBRQ14739 615 aaKnown RBP6.34□□□□□ -1.39
HMGB1P17-201ENST00000403495 NXPE4Q6UWF7 544 aa6.34□□□□□ -1.39
HMGB1P17-201ENST00000403495 FBF1Q8TES7 1133 aa6.34□□□□□ -1.39
HMGB1P17-201ENST00000403495 PNMA5Q96PV4 448 aa6.34□□□□□ -1.39
HMGB1P17-201ENST00000403495 MARK1Q9P0L2 795 aa6.34□□□□□ -1.39
HMGB1P17-201ENST00000403495 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P17-201ENST00000403495 AK5Q9Y6K8 562 aa6.34□□□□□ -1.39
HMGB1P17-201ENST00000403495 IGSF3O75054 1194 aa6.33□□□□□ -1.4
HMGB1P17-201ENST00000403495 PPFIA3O75145 1194 aa6.33□□□□□ -1.4
HMGB1P17-201ENST00000403495 EIF4BP23588 611 aaKnown RBP6.33□□□□□ -1.4
HMGB1P17-201ENST00000403495 MEI1Q5TIA1 1274 aa6.33□□□□□ -1.4
HMGB1P17-201ENST00000403495 GALNT12Q8IXK2 581 aa6.33□□□□□ -1.4
HMGB1P17-201ENST00000403495 NSUN5Q96P11 429 aaKnown RBP6.33□□□□□ -1.4
HMGB1P17-201ENST00000403495 IGFLR1Q9H665 355 aa6.33□□□□□ -1.4
HMGB1P17-201ENST00000403495 NLRP2Q9NX02 1062 aa6.33□□□□□ -1.4
HMGB1P17-201ENST00000403495 SPG7Q9UQ90 795 aa6.33□□□□□ -1.4
HMGB1P17-201ENST00000403495 FGFR3P22607 806 aa6.32□□□□□ -1.4
HMGB1P17-201ENST00000403495 TBC1D8BQ0IIM8 1120 aa6.32□□□□□ -1.4
HMGB1P17-201ENST00000403495 PEAR1Q5VY43 1037 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P17-201ENST00000403495 HFE2Q6ZVN8 426 aa6.32□□□□□ -1.4
HMGB1P17-201ENST00000403495 BCO2Q9BYV7 579 aa6.32□□□□□ -1.4
HMGB1P17-201ENST00000403495 BCL11AQ9H165 835 aa6.32□□□□□ -1.4
HMGB1P17-201ENST00000403495 C12orf49Q9H741 205 aa6.32□□□□□ -1.4
HMGB1P17-201ENST00000403495 A0A1W2PP55 124 aa6.31□□□□□ -1.4
HMGB1P17-201ENST00000403495 PHF20L1A8MW92 1017 aa6.31□□□□□ -1.4
HMGB1P17-201ENST00000403495 SCAMP3O14828 347 aaKnown RBP6.31□□□□□ -1.4
HMGB1P17-201ENST00000403495 USP17L7P0C7H9 530 aa6.31□□□□□ -1.4
HMGB1P17-201ENST00000403495 FGD1P98174 961 aa6.31□□□□□ -1.4
HMGB1P17-201ENST00000403495 GRM2Q14416 872 aa6.31□□□□□ -1.4
HMGB1P17-201ENST00000403495 OR13H1Q8NG92 308 aa6.31□□□□□ -1.4
HMGB1P17-201ENST00000403495 HHIPQ96QV1 700 aa6.31□□□□□ -1.4
HMGB1P17-201ENST00000403495 ATXN7L1Q9ULK2 861 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P17-201ENST00000403495 J3QW42 95 aa6.3□□□□□ -1.4
HMGB1P17-201ENST00000403495 C2CD2LO14523 706 aa6.3□□□□□ -1.4
HMGB1P17-201ENST00000403495 ERCC5P28715 1186 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P17-201ENST00000403495 FANCCQ00597 558 aa6.3□□□□□ -1.4
HMGB1P17-201ENST00000403495 DHX32Q7L7V1 743 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms