RNA–Protein interactions for RNA: ENST00000403444.7

CEACAM1-207, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-207ENST00000403444 C9orf78Q9NZ63 289 aaPredicted RBP7.82□□□□□ -1.16
CEACAM1-207ENST00000403444 GNAI2P04899 355 aa7.81□□□□□ -1.16
CEACAM1-207ENST00000403444 TEFQ10587 303 aa7.81□□□□□ -1.16
CEACAM1-207ENST00000403444 SEMA3FQ13275 785 aa7.81□□□□□ -1.16
CEACAM1-207ENST00000403444 FAM173BQ6P4H8 233 aa7.81□□□□□ -1.16
CEACAM1-207ENST00000403444 SH3BP1Q9Y3L3 701 aa7.81□□□□□ -1.16
CEACAM1-207ENST00000403444 LTBP1Q14766 1721 aa7.81□□□□□ -1.16
CEACAM1-207ENST00000403444 FLIIQ13045 1269 aa7.81□□□□□ -1.16
CEACAM1-207ENST00000403444 RABEP1Q15276 862 aa7.81□□□□□ -1.16
CEACAM1-207ENST00000403444 STK11IPQ8N1F8 1099 aa7.81□□□□□ -1.16
CEACAM1-207ENST00000403444 LRRCC1Q9C099 1032 aa7.81□□□□□ -1.16
CEACAM1-207ENST00000403444 PCDH11XQ9BZA7 1347 aa7.81□□□□□ -1.16
CEACAM1-207ENST00000403444 PCDH11YQ9BZA8 1340 aa7.81□□□□□ -1.16
CEACAM1-207ENST00000403444 RAB3GAP1Q15042 981 aa7.81□□□□□ -1.16
CEACAM1-207ENST00000403444 TAF7Q15545 349 aaPredicted RBP7.81□□□□□ -1.16
CEACAM1-207ENST00000403444 KLHDC4Q8TBB5 520 aa7.81□□□□□ -1.16
CEACAM1-207ENST00000403444 KIF2CQ99661 725 aa7.81□□□□□ -1.16
CEACAM1-207ENST00000403444 RGS17Q9UGC6 210 aaPredicted RBP7.81□□□□□ -1.16
CEACAM1-207ENST00000403444 ATP10DQ9P241 1426 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 GOLIM4O00461 696 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 KCNQ3O43525 872 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 CSB-PGBD3P0DP91 1061 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 MX1P20591 662 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 PDE1AP54750 535 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 ZC3H6P61129 1189 aaKnown RBP7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 CAMK4Q16566 473 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 ZSCAN23Q3MJ62 389 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 NECAB1Q8N987 351 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 TMX3Q96JJ7 454 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 TIGD1Q96MW7 591 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 TRERF1Q96PN7 1200 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 RBSNQ9H1K0 784 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 HMGB1P09429 215 aaKnown RBP7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 CHRNA2Q15822 529 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 ATP2B3Q16720 1220 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 DRC7Q8IY82 874 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 FBXO41Q8TF61 875 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 CCDC8Q9H0W5 538 aaPredicted RBP7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 DIAPH3Q9NSV4 1193 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 CCDC83Q8IWF9 413 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 USP26Q9BXU7 913 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 PRDM16Q9HAZ2 1276 aa7.8□□□□□ -1.16
CEACAM1-207ENST00000403444 CCDC66A2RUB6 948 aa7.79□□□□□ -1.16
CEACAM1-207ENST00000403444 PI4KAP2A4QPH2 592 aa7.79□□□□□ -1.16
CEACAM1-207ENST00000403444 GNAT3A8MTJ3 354 aa7.79□□□□□ -1.16
CEACAM1-207ENST00000403444 RNMTO43148 476 aaKnown RBP7.79□□□□□ -1.16
CEACAM1-207ENST00000403444 GADD45BO75293 160 aaPredicted RBP7.79□□□□□ -1.16
CEACAM1-207ENST00000403444 PI4KAP1Q8N8J0 262 aa7.79□□□□□ -1.16
CEACAM1-207ENST00000403444 BTG4Q9NY30 223 aa7.79□□□□□ -1.16
CEACAM1-207ENST00000403444 USP25Q9UHP3 1055 aa7.79□□□□□ -1.16
CEACAM1-207ENST00000403444 RBM25P49756 843 aaKnown RBP7.79□□□□□ -1.16
CEACAM1-207ENST00000403444 PPP1R42Q7Z4L9 355 aa7.79□□□□□ -1.16
CEACAM1-207ENST00000403444 ANKRD44Q8N8A2 993 aa7.79□□□□□ -1.16
CEACAM1-207ENST00000403444 CDCA7Q9BWT1 371 aaPredicted RBP7.79□□□□□ -1.16
CEACAM1-207ENST00000403444 DCTPP1Q9H773 170 aa7.79□□□□□ -1.16
CEACAM1-207ENST00000403444 GOLGA6L4A6NEF3 574 aa7.78□□□□□ -1.16
CEACAM1-207ENST00000403444 HOXB7P09629 217 aa7.78□□□□□ -1.16
CEACAM1-207ENST00000403444 NUCB2P80303 420 aa7.78□□□□□ -1.16
CEACAM1-207ENST00000403444 SLC39A6Q13433 755 aa7.78□□□□□ -1.16
CEACAM1-207ENST00000403444 CWF19L2Q2TBE0 894 aaKnown RBP7.78□□□□□ -1.16
CEACAM1-207ENST00000403444 LRRC2Q9BYS8 371 aa7.78□□□□□ -1.16
CEACAM1-207ENST00000403444 ZBTB12Q9Y330 459 aaPredicted RBP7.78□□□□□ -1.16
CEACAM1-207ENST00000403444 SKOR2Q2VWA4 1001 aaPredicted RBP7.78□□□□□ -1.16
CEACAM1-207ENST00000403444 HSP90AB3PQ58FF7 597 aa7.78□□□□□ -1.16
CEACAM1-207ENST00000403444 PRPF40BQ6NWY9 871 aaKnown RBP7.78□□□□□ -1.16
CEACAM1-207ENST00000403444 LGR6Q9HBX8 967 aa7.78□□□□□ -1.16
CEACAM1-207ENST00000403444 CHPF2Q9P2E5 772 aa7.78□□□□□ -1.16
CEACAM1-207ENST00000403444 PRAMEF22A3QJZ6 481 aa7.78□□□□□ -1.16
CEACAM1-207ENST00000403444 NBPF7P0C2Y1 421 aaPredicted RBP7.78□□□□□ -1.16
CEACAM1-207ENST00000403444 TNNT1P13805 278 aa7.78□□□□□ -1.16
CEACAM1-207ENST00000403444 CASTP20810 708 aaKnown RBP7.78□□□□□ -1.16
CEACAM1-207ENST00000403444 RAB11FIP4Q86YS3 637 aa7.78□□□□□ -1.16
CEACAM1-207ENST00000403444 EDC3Q96F86 508 aaKnown RBP7.78□□□□□ -1.16
CEACAM1-207ENST00000403444 BOLA2Q9H3K6 86 aa7.78□□□□□ -1.16
CEACAM1-207ENST00000403444 TFIP11Q9UBB9 837 aaKnown RBP7.78□□□□□ -1.16
CEACAM1-207ENST00000403444 BRCA1P38398 1863 aaKnown RBP7.77□□□□□ -1.16
CEACAM1-207ENST00000403444 ABCC4O15439 1325 aa7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 IL2RBP14784 551 aa7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 CAPN2P17655 700 aa7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 CT47A1Q5JQC4 288 aaPredicted RBP7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 GPATCH11Q8N954 259 aa7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 DDX11Q96FC9 970 aa7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 TMEM63CQ9P1W3 806 aa7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 CNPY2Q9Y2B0 182 aa7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 ERVV-2B6SEH9 535 aa7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 ZNF500O60304 480 aaPredicted RBP7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 IFIT2P09913 472 aaKnown RBP7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 HCLS1P14317 486 aaPredicted RBP7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 ZNF530Q6P9A1 599 aaPredicted RBP7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 JAKMIP1Q96N16 626 aaKnown RBP7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 IL25Q9H293 177 aa7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 SLC52A2Q9HAB3 445 aa7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 SMC3Q9UQE7 1217 aa7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 COL15A1P39059 1388 aa7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 ANKRD31Q8N7Z5 1873 aa7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 GTF2A1P52655 376 aaPredicted RBP7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 PDIA6Q15084 440 aa7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 CCDC30Q5VVM6 783 aa7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 GIMAP6Q6P9H5 292 aa7.77□□□□□ -1.17
CEACAM1-207ENST00000403444 RPAP2Q8IXW5 612 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms