RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 MRC1P22897 1456 aa23.67■■□□□ 1.38
CCDC47-202ENST00000403162 GLI3P10071 1580 aa23.67■■□□□ 1.38
CCDC47-202ENST00000403162 OS9Q13438 667 aaPredicted RBP23.67■■□□□ 1.38
CCDC47-202ENST00000403162 ECHDC1Q9NTX5 307 aa23.67■■□□□ 1.38
CCDC47-202ENST00000403162 KDM4AO75164 1064 aa23.66■■□□□ 1.38
CCDC47-202ENST00000403162 CPA1P15085 419 aa23.66■■□□□ 1.38
CCDC47-202ENST00000403162 PTH1RQ03431 593 aa23.66■■□□□ 1.38
CCDC47-202ENST00000403162 CCDC83Q8IWF9 413 aa23.66■■□□□ 1.38
CCDC47-202ENST00000403162 GPATCH3Q96I76 525 aa23.66■■□□□ 1.38
CCDC47-202ENST00000403162 JAKMIP1Q96N16 626 aaKnown RBP23.66■■□□□ 1.38
CCDC47-202ENST00000403162 CYP46A1Q9Y6A2 500 aa23.66■■□□□ 1.38
CCDC47-202ENST00000403162 ERC1Q8IUD2 1116 aa23.65■■□□□ 1.38
CCDC47-202ENST00000403162 MYRIPQ8NFW9 859 aa23.65■■□□□ 1.38
CCDC47-202ENST00000403162 ALDH1L1O75891 902 aa23.64■■□□□ 1.38
CCDC47-202ENST00000403162 SLC39A6Q13433 755 aa23.64■■□□□ 1.38
CCDC47-202ENST00000403162 ADCK5Q3MIX3 580 aa23.64■■□□□ 1.38
CCDC47-202ENST00000403162 MARCH10Q8NA82 808 aaPredicted RBP23.64■■□□□ 1.38
CCDC47-202ENST00000403162 PDIA4P13667 645 aaKnown RBP23.64■■□□□ 1.37
CCDC47-202ENST00000403162 NOLC1Q14978 699 aaKnown RBP eCLIP23.64■■□□□ 1.37
CCDC47-202ENST00000403162 NECTIN1Q15223 517 aa23.64■■□□□ 1.37
CCDC47-202ENST00000403162 PRPF40BQ6NWY9 871 aaKnown RBP23.64■■□□□ 1.37
CCDC47-202ENST00000403162 EVI5LQ96CN4 794 aa23.64■■□□□ 1.37
CCDC47-202ENST00000403162 PRIMPOLQ96LW4 560 aa23.64■■□□□ 1.37
CCDC47-202ENST00000403162 DNM1Q05193 864 aaKnown RBP23.63■■□□□ 1.37
CCDC47-202ENST00000403162 CCDC171Q6TFL3 1326 aa23.63■■□□□ 1.37
CCDC47-202ENST00000403162 SPTLC3Q9NUV7 552 aa23.62■■□□□ 1.37
CCDC47-202ENST00000403162 HDAC5Q9UQL6 1122 aa23.62■■□□□ 1.37
CCDC47-202ENST00000403162 ST3GAL1Q11201 340 aa23.62■■□□□ 1.37
CCDC47-202ENST00000403162 ZNF772Q68DY9 489 aaPredicted RBP23.62■■□□□ 1.37
CCDC47-202ENST00000403162 ZNF790Q6PG37 636 aa23.62■■□□□ 1.37
CCDC47-202ENST00000403162 DBF4Q9UBU7 674 aaPredicted RBP23.62■■□□□ 1.37
CCDC47-202ENST00000403162 TOGARAM1Q9Y4F4 1720 aa23.62■■□□□ 1.37
CCDC47-202ENST00000403162 IFIT2P09913 472 aaKnown RBP23.61■■□□□ 1.37
CCDC47-202ENST00000403162 TMOD3Q9NYL9 352 aa23.61■■□□□ 1.37
CCDC47-202ENST00000403162 GIMAP6Q6P9H5 292 aa23.61■■□□□ 1.37
CCDC47-202ENST00000403162 ZNF830Q96NB3 372 aaPredicted RBP23.61■■□□□ 1.37
CCDC47-202ENST00000403162 TTC12Q9H892 705 aaPredicted RBP23.61■■□□□ 1.37
CCDC47-202ENST00000403162 THSD7AQ9UPZ6 1657 aa23.6■■□□□ 1.37
CCDC47-202ENST00000403162 ZKSCAN1P17029 563 aaPredicted RBP23.6■■□□□ 1.37
CCDC47-202ENST00000403162 HMGN5P82970 282 aaKnown RBP23.6■■□□□ 1.37
CCDC47-202ENST00000403162 DNTTIP2Q5QJE6 756 aaKnown RBP23.6■■□□□ 1.37
CCDC47-202ENST00000403162 TTC5Q8N0Z6 440 aa23.6■■□□□ 1.37
CCDC47-202ENST00000403162 HIP1O00291 1037 aa23.59■■□□□ 1.37
CCDC47-202ENST00000403162 ANXA1P04083 346 aa23.59■■□□□ 1.37
CCDC47-202ENST00000403162 ME3Q16798 604 aa23.59■■□□□ 1.37
CCDC47-202ENST00000403162 SNRKQ9NRH2 765 aa23.59■■□□□ 1.37
CCDC47-202ENST00000403162 C9orf78Q9NZ63 289 aaPredicted RBP23.59■■□□□ 1.37
CCDC47-202ENST00000403162 GTF2F1P35269 517 aaKnown RBP eCLIP23.58■■□□□ 1.37
CCDC47-202ENST00000403162 SYTL4Q96C24 671 aaPredicted RBP23.58■■□□□ 1.37
CCDC47-202ENST00000403162 MAP3K2Q9Y2U5 619 aa23.58■■□□□ 1.37
CCDC47-202ENST00000403162 RBM8AQ9Y5S9 174 aaKnown RBP23.58■■□□□ 1.37
CCDC47-202ENST00000403162 ONECUT3O60422 494 aaPredicted RBP23.58■■□□□ 1.36
CCDC47-202ENST00000403162 CREB3L3Q68CJ9 461 aa23.58■■□□□ 1.36
CCDC47-202ENST00000403162 SEPT12Q8IYM1 358 aa23.58■■□□□ 1.36
CCDC47-202ENST00000403162 MAP4K1Q92918 833 aa23.58■■□□□ 1.36
CCDC47-202ENST00000403162 PKNOX2Q96KN3 472 aa23.58■■□□□ 1.36
CCDC47-202ENST00000403162 TPM3P06753 285 aa23.57■■□□□ 1.36
CCDC47-202ENST00000403162 KSR2Q6VAB6 950 aa23.57■■□□□ 1.36
CCDC47-202ENST00000403162 MPNDQ8N594 471 aa23.57■■□□□ 1.36
CCDC47-202ENST00000403162 ELP1O95163 1332 aa23.57■■□□□ 1.36
CCDC47-202ENST00000403162 VPS37CA5D8V6 355 aaPredicted RBP23.57■■□□□ 1.36
CCDC47-202ENST00000403162 PSMA5P28066 241 aa23.57■■□□□ 1.36
CCDC47-202ENST00000403162 TPRNQ4KMQ1 711 aa23.57■■□□□ 1.36
CCDC47-202ENST00000403162 AACSQ86V21 672 aa23.57■■□□□ 1.36
CCDC47-202ENST00000403162 PIGBQ92521 554 aa23.57■■□□□ 1.36
CCDC47-202ENST00000403162 PA2G4Q9UQ80 394 aaKnown RBP23.57■■□□□ 1.36
CCDC47-202ENST00000403162 CCDC192P0DO97 292 aa23.56■■□□□ 1.36
CCDC47-202ENST00000403162 ACSBG1Q96GR2 724 aa23.56■■□□□ 1.36
CCDC47-202ENST00000403162 TPCN1Q9ULQ1 816 aa23.56■■□□□ 1.36
CCDC47-202ENST00000403162 HEG1Q9ULI3 1381 aa23.56■■□□□ 1.36
CCDC47-202ENST00000403162 KAT6BQ8WYB5 2073 aa23.55■■□□□ 1.36
CCDC47-202ENST00000403162 PDCP20941 246 aa23.55■■□□□ 1.36
CCDC47-202ENST00000403162 ZNF496Q96IT1 587 aaPredicted RBP23.55■■□□□ 1.36
CCDC47-202ENST00000403162 UTYO14607 1347 aa23.54■■□□□ 1.36
CCDC47-202ENST00000403162 DOT1LQ8TEK3 1739 aa23.54■■□□□ 1.36
CCDC47-202ENST00000403162 AP5Z1O43299 807 aa23.54■■□□□ 1.36
CCDC47-202ENST00000403162 KRT85P78386 507 aa23.54■■□□□ 1.36
CCDC47-202ENST00000403162 ALDH8A1Q9H2A2 487 aaPredicted RBP23.54■■□□□ 1.36
CCDC47-202ENST00000403162 ITGB4P16144 1822 aa23.54■■□□□ 1.36
CCDC47-202ENST00000403162 SLC27A2O14975 620 aa23.54■■□□□ 1.36
CCDC47-202ENST00000403162 GIGYF1O75420 1035 aaPredicted RBP23.54■■□□□ 1.36
CCDC47-202ENST00000403162 NMIQ13287 307 aaPredicted RBP23.54■■□□□ 1.36
CCDC47-202ENST00000403162 LARP1BQ659C4 914 aaKnown RBP23.54■■□□□ 1.36
CCDC47-202ENST00000403162 NECAB1Q8N987 351 aa23.54■■□□□ 1.36
CCDC47-202ENST00000403162 ANKRD1Q15327 319 aa23.53■■□□□ 1.36
CCDC47-202ENST00000403162 TTC6Q86TZ1 520 aa23.53■■□□□ 1.36
CCDC47-202ENST00000403162 FAM227BQ96M60 508 aa23.53■■□□□ 1.36
CCDC47-202ENST00000403162 FMNL2Q96PY5 1086 aa23.53■■□□□ 1.36
CCDC47-202ENST00000403162 KCNJ4P48050 445 aa23.52■■□□□ 1.36
CCDC47-202ENST00000403162 RBM6P78332 1123 aaKnown RBP23.52■■□□□ 1.36
CCDC47-202ENST00000403162 BCL9O00512 1426 aa23.52■■□□□ 1.36
CCDC47-202ENST00000403162 SASH1O94885 1247 aa23.52■■□□□ 1.36
CCDC47-202ENST00000403162 PROSER3Q2NL68 480 aa23.52■■□□□ 1.36
CCDC47-202ENST00000403162 LINS1Q8NG48 757 aa23.52■■□□□ 1.36
CCDC47-202ENST00000403162 KIAA1524Q8TCG1 905 aa23.52■■□□□ 1.36
CCDC47-202ENST00000403162 ASAP1Q9ULH1 1129 aa23.52■■□□□ 1.36
CCDC47-202ENST00000403162 PRAMEF22A3QJZ6 481 aa23.51■■□□□ 1.35
CCDC47-202ENST00000403162 CWF19L2Q2TBE0 894 aaKnown RBP23.51■■□□□ 1.35
CCDC47-202ENST00000403162 FAM182BQ5T319 152 aa23.51■■□□□ 1.35
CCDC47-202ENST00000403162 RNF20Q5VTR2 975 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms