RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.78■□□□□ 0.28
ATG3-202ENST00000402314 SMC3Q9UQE7 1217 aa16.78■□□□□ 0.28
ATG3-202ENST00000402314 V9GYY5 206 aaPredicted RBP16.78■□□□□ 0.28
ATG3-202ENST00000402314 N4BP2Q86UW6 1770 aaPredicted RBP16.78■□□□□ 0.28
ATG3-202ENST00000402314 VGLL3A8MV65 326 aa16.78■□□□□ 0.28
ATG3-202ENST00000402314 ERC1Q8IUD2 1116 aa16.78■□□□□ 0.28
ATG3-202ENST00000402314 EVI5LQ96CN4 794 aa16.78■□□□□ 0.28
ATG3-202ENST00000402314 IL17RAQ96F46 866 aa16.78■□□□□ 0.28
ATG3-202ENST00000402314 WDR33Q9C0J8 1336 aaKnown RBP16.77■□□□□ 0.28
ATG3-202ENST00000402314 NCAPD2Q15021 1401 aa16.77■□□□□ 0.28
ATG3-202ENST00000402314 ST3GAL1Q11201 340 aa16.77■□□□□ 0.28
ATG3-202ENST00000402314 FERMT3Q86UX7 667 aa16.77■□□□□ 0.28
ATG3-202ENST00000402314 TTC5Q8N0Z6 440 aa16.77■□□□□ 0.28
ATG3-202ENST00000402314 RUFY2Q8WXA3 655 aa16.77■□□□□ 0.28
ATG3-202ENST00000402314 CCDC171Q6TFL3 1326 aa16.77■□□□□ 0.28
ATG3-202ENST00000402314 DNM1Q05193 864 aaKnown RBP16.77■□□□□ 0.27
ATG3-202ENST00000402314 TMEM94Q12767 1356 aa16.77■□□□□ 0.27
ATG3-202ENST00000402314 SLFNL1Q499Z3 407 aa16.77■□□□□ 0.27
ATG3-202ENST00000402314 NPHP1O15259 732 aa16.76■□□□□ 0.27
ATG3-202ENST00000402314 GJB2P29033 226 aa16.76■□□□□ 0.27
ATG3-202ENST00000402314 ME3Q16798 604 aa16.76■□□□□ 0.27
ATG3-202ENST00000402314 CREB3L3Q68CJ9 461 aa16.76■□□□□ 0.27
ATG3-202ENST00000402314 IFNL2Q8IZJ0 200 aa16.76■□□□□ 0.27
ATG3-202ENST00000402314 METTL22Q9BUU2 404 aaPredicted RBP16.76■□□□□ 0.27
ATG3-202ENST00000402314 NRBP1Q9UHY1 535 aa16.76■□□□□ 0.27
ATG3-202ENST00000402314 VPS37CA5D8V6 355 aaPredicted RBP16.76■□□□□ 0.27
ATG3-202ENST00000402314 STX6O43752 255 aa16.76■□□□□ 0.27
ATG3-202ENST00000402314 TFCP2Q12800 502 aa16.76■□□□□ 0.27
ATG3-202ENST00000402314 NECTIN1Q15223 517 aa16.76■□□□□ 0.27
ATG3-202ENST00000402314 UTP14CQ5TAP6 766 aaKnown RBP16.76■□□□□ 0.27
ATG3-202ENST00000402314 CKAP2LQ8IYA6 745 aa16.76■□□□□ 0.27
ATG3-202ENST00000402314 HSPA2P54652 639 aa16.75■□□□□ 0.27
ATG3-202ENST00000402314 ZSCAN22P10073 491 aaPredicted RBP16.75■□□□□ 0.27
ATG3-202ENST00000402314 CCDC129Q6ZRS4 1044 aa16.75■□□□□ 0.27
ATG3-202ENST00000402314 SEC62Q99442 399 aaKnown RBP16.75■□□□□ 0.27
ATG3-202ENST00000402314 CYP46A1Q9Y6A2 500 aa16.75■□□□□ 0.27
ATG3-202ENST00000402314 LRP10Q7Z4F1 713 aa16.75■□□□□ 0.27
ATG3-202ENST00000402314 LUZP1Q86V48 1076 aa16.75■□□□□ 0.27
ATG3-202ENST00000402314 DBNLQ9UJU6 430 aaKnown RBP16.75■□□□□ 0.27
ATG3-202ENST00000402314 TPCN1Q9ULQ1 816 aa16.75■□□□□ 0.27
ATG3-202ENST00000402314 UTYO14607 1347 aa16.74■□□□□ 0.27
ATG3-202ENST00000402314 A0A087WZG4 1122 aa16.74■□□□□ 0.27
ATG3-202ENST00000402314 STK3Q13188 491 aa16.74■□□□□ 0.27
ATG3-202ENST00000402314 KIAA1524Q8TCG1 905 aa16.74■□□□□ 0.27
ATG3-202ENST00000402314 DNAJC2Q99543 621 aaKnown RBP16.74■□□□□ 0.27
ATG3-202ENST00000402314 SNRPA1P09661 255 aaKnown RBP16.74■□□□□ 0.27
ATG3-202ENST00000402314 CABP4P57796 275 aa16.74■□□□□ 0.27
ATG3-202ENST00000402314 SLC27A2O14975 620 aa16.73■□□□□ 0.27
ATG3-202ENST00000402314 ZSWIM6Q9HCJ5 1215 aa16.73■□□□□ 0.27
ATG3-202ENST00000402314 PTPN12Q05209 780 aaKnown RBP16.73■□□□□ 0.27
ATG3-202ENST00000402314 DBNDD2Q9BQY9 259 aa16.73■□□□□ 0.27
ATG3-202ENST00000402314 ZKSCAN1P17029 563 aaPredicted RBP16.72■□□□□ 0.27
ATG3-202ENST00000402314 CCDC186Q7Z3E2 898 aa16.72■□□□□ 0.27
ATG3-202ENST00000402314 FGD1P98174 961 aa16.72■□□□□ 0.27
ATG3-202ENST00000402314 TTLL7Q6ZT98 887 aa16.72■□□□□ 0.27
ATG3-202ENST00000402314 FAM184AQ8NB25 1140 aa16.72■□□□□ 0.27
ATG3-202ENST00000402314 MAP4K1Q92918 833 aa16.72■□□□□ 0.27
ATG3-202ENST00000402314 F13A1P00488 732 aa16.72■□□□□ 0.27
ATG3-202ENST00000402314 DDX46Q7L014 1031 aaKnown RBP16.72■□□□□ 0.27
ATG3-202ENST00000402314 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.72■□□□□ 0.27
ATG3-202ENST00000402314 EPB41L2O43491 1005 aaKnown RBP16.71■□□□□ 0.27
ATG3-202ENST00000402314 LMBR1LQ6UX01 489 aa16.71■□□□□ 0.27
ATG3-202ENST00000402314 GTPBP4Q9BZE4 634 aaKnown RBP16.71■□□□□ 0.27
ATG3-202ENST00000402314 HDAC5Q9UQL6 1122 aa16.71■□□□□ 0.27
ATG3-202ENST00000402314 ZNF330Q9Y3S2 320 aaPredicted RBP16.71■□□□□ 0.27
ATG3-202ENST00000402314 PHRF1Q9P1Y6 1649 aaKnown RBP16.71■□□□□ 0.27
ATG3-202ENST00000402314 NBPF26B4DH59 902 aa16.71■□□□□ 0.27
ATG3-202ENST00000402314 A1BGP04217 495 aa16.71■□□□□ 0.27
ATG3-202ENST00000402314 GTF2F1P35269 517 aaKnown RBP eCLIP16.71■□□□□ 0.27
ATG3-202ENST00000402314 RFX5P48382 616 aaPredicted RBP16.71■□□□□ 0.27
ATG3-202ENST00000402314 NBPF14Q5TI25 921 aa16.71■□□□□ 0.27
ATG3-202ENST00000402314 VPS53Q5VIR6 699 aa16.71■□□□□ 0.27
ATG3-202ENST00000402314 NBPF10Q6P3W6 841 aaKnown RBP16.71■□□□□ 0.27
ATG3-202ENST00000402314 NBPF15Q8N660 670 aa16.71■□□□□ 0.27
ATG3-202ENST00000402314 DCAF5Q96JK2 942 aa16.71■□□□□ 0.27
ATG3-202ENST00000402314 TRERF1Q96PN7 1200 aa16.71■□□□□ 0.27
ATG3-202ENST00000402314 FMNL2Q96PY5 1086 aa16.71■□□□□ 0.27
ATG3-202ENST00000402314 SPTLC3Q9NUV7 552 aa16.71■□□□□ 0.27
ATG3-202ENST00000402314 MTMR6Q9Y217 621 aa16.71■□□□□ 0.27
ATG3-202ENST00000402314 TRPM3Q9HCF6 1732 aaPredicted RBP16.71■□□□□ 0.27
ATG3-202ENST00000402314 ZNF142P52746 1687 aaPredicted RBP16.7■□□□□ 0.26
ATG3-202ENST00000402314 ERICH4A6NGS2 130 aa16.7■□□□□ 0.26
ATG3-202ENST00000402314 PPFIA3O75145 1194 aa16.7■□□□□ 0.26
ATG3-202ENST00000402314 UVSSAQ2YD98 709 aa16.7■□□□□ 0.26
ATG3-202ENST00000402314 TNNI3KQ59H18 835 aa16.7■□□□□ 0.26
ATG3-202ENST00000402314 LRRC2Q9BYS8 371 aa16.7■□□□□ 0.26
ATG3-202ENST00000402314 ZBTB3Q9H5J0 574 aa16.7■□□□□ 0.26
ATG3-202ENST00000402314 FPGT-TNNI3KV9GXZ4 949 aa16.7■□□□□ 0.26
ATG3-202ENST00000402314 COL15A1P39059 1388 aa16.7■□□□□ 0.26
ATG3-202ENST00000402314 OVOS2A0A0G2JMS6 1433 aa16.7■□□□□ 0.26
ATG3-202ENST00000402314 UBE2HP62256 183 aa16.7■□□□□ 0.26
ATG3-202ENST00000402314 C5P01031 1676 aa16.69■□□□□ 0.26
ATG3-202ENST00000402314 MST1RQ04912 1400 aa16.69■□□□□ 0.26
ATG3-202ENST00000402314 NCBP1Q09161 790 aaKnown RBP16.69■□□□□ 0.26
ATG3-202ENST00000402314 TFIP11Q9UBB9 837 aaKnown RBP16.69■□□□□ 0.26
ATG3-202ENST00000402314 ZNF594Q96JF6 807 aaPredicted RBP16.69■□□□□ 0.26
ATG3-202ENST00000402314 NEUROD6Q96NK8 337 aa16.69■□□□□ 0.26
ATG3-202ENST00000402314 CCDC85AQ96PX6 553 aaPredicted RBP16.69■□□□□ 0.26
ATG3-202ENST00000402314 TIMM10P62072 90 aa16.68■□□□□ 0.26
ATG3-202ENST00000402314 FBXW7Q969H0 707 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms