RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 RPS6KB1P23443 525 aa10.79□□□□□ -0.68
HPS4-203ENST00000402105 PSME1Q06323 249 aa10.79□□□□□ -0.68
HPS4-203ENST00000402105 NEK1Q96PY6 1258 aa10.79□□□□□ -0.68
HPS4-203ENST00000402105 MYD88Q99836 296 aa10.79□□□□□ -0.68
HPS4-203ENST00000402105 DDX19AQ9NUU7 478 aaKnown RBP10.79□□□□□ -0.68
HPS4-203ENST00000402105 APOBRQ0VD83 1088 aa10.79□□□□□ -0.68
HPS4-203ENST00000402105 HSP90AA4PQ58FG1 418 aa10.79□□□□□ -0.68
HPS4-203ENST00000402105 SBNO1A3KN83 1393 aa10.79□□□□□ -0.68
HPS4-203ENST00000402105 TMEM131LA2VDJ0 1609 aa10.79□□□□□ -0.68
HPS4-203ENST00000402105 NPHP3Q7Z494 1330 aa10.79□□□□□ -0.68
HPS4-203ENST00000402105 REREQ9P2R6 1566 aa10.79□□□□□ -0.68
HPS4-203ENST00000402105 HTATSF1O43719 755 aaKnown RBP10.78□□□□□ -0.68
HPS4-203ENST00000402105 ANKRD1Q15327 319 aa10.78□□□□□ -0.68
HPS4-203ENST00000402105 ERC1Q8IUD2 1116 aa10.78□□□□□ -0.68
HPS4-203ENST00000402105 AOPEPQ8N6M6 819 aa10.78□□□□□ -0.68
HPS4-203ENST00000402105 CLSTN2Q9H4D0 955 aa10.78□□□□□ -0.68
HPS4-203ENST00000402105 ZNF215Q9UL58 517 aaPredicted RBP10.78□□□□□ -0.68
HPS4-203ENST00000402105 USP6P35125 1406 aa10.78□□□□□ -0.68
HPS4-203ENST00000402105 CCDC69A6NI79 296 aa10.78□□□□□ -0.68
HPS4-203ENST00000402105 MAP4K1Q92918 833 aa10.78□□□□□ -0.68
HPS4-203ENST00000402105 CCDC85AQ96PX6 553 aaPredicted RBP10.78□□□□□ -0.68
HPS4-203ENST00000402105 ARHGEF10O15013 1369 aa10.78□□□□□ -0.68
HPS4-203ENST00000402105 GRM8O00222 908 aa10.78□□□□□ -0.68
HPS4-203ENST00000402105 NEXNQ0ZGT2 675 aa10.78□□□□□ -0.68
HPS4-203ENST00000402105 TOB2Q14106 344 aaPredicted RBP10.78□□□□□ -0.68
HPS4-203ENST00000402105 ELF2Q15723 593 aa10.78□□□□□ -0.68
HPS4-203ENST00000402105 ESCO1Q5FWF5 840 aa10.78□□□□□ -0.68
HPS4-203ENST00000402105 FSIP1Q8NA03 581 aa10.78□□□□□ -0.68
HPS4-203ENST00000402105 CDC42BPGQ6DT37 1551 aa10.78□□□□□ -0.68
HPS4-203ENST00000402105 DIP2CQ9Y2E4 1556 aa10.77□□□□□ -0.68
HPS4-203ENST00000402105 A0A1B0GVL5 298 aa10.77□□□□□ -0.68
HPS4-203ENST00000402105 SMTNL1A8MU46 457 aa10.77□□□□□ -0.69
HPS4-203ENST00000402105 GTF2F1P35269 517 aaKnown RBP eCLIP10.77□□□□□ -0.69
HPS4-203ENST00000402105 HAND2P61296 217 aa10.77□□□□□ -0.69
HPS4-203ENST00000402105 ZBTB22O15209 634 aa10.77□□□□□ -0.69
HPS4-203ENST00000402105 KSR2Q6VAB6 950 aa10.77□□□□□ -0.69
HPS4-203ENST00000402105 CFAP45Q9UL16 551 aa10.77□□□□□ -0.69
HPS4-203ENST00000402105 RIMS1Q86UR5 1692 aaKnown RBP10.76□□□□□ -0.69
HPS4-203ENST00000402105 TFCP2Q12800 502 aa10.76□□□□□ -0.69
HPS4-203ENST00000402105 HSP90AB3PQ58FF7 597 aa10.76□□□□□ -0.69
HPS4-203ENST00000402105 ST7Q9NRC1 585 aa10.76□□□□□ -0.69
HPS4-203ENST00000402105 CEP170BQ9Y4F5 1589 aaPredicted RBP10.76□□□□□ -0.69
HPS4-203ENST00000402105 SETD1BQ9UPS6 1966 aaKnown RBP10.76□□□□□ -0.69
HPS4-203ENST00000402105 HIP1O00291 1037 aa10.76□□□□□ -0.69
HPS4-203ENST00000402105 GOLIM4O00461 696 aa10.76□□□□□ -0.69
HPS4-203ENST00000402105 DDX58O95786 925 aaKnown RBP10.76□□□□□ -0.69
HPS4-203ENST00000402105 UBE3BQ7Z3V4 1068 aa10.76□□□□□ -0.69
HPS4-203ENST00000402105 CCAR2Q8N163 923 aaKnown RBP10.76□□□□□ -0.69
HPS4-203ENST00000402105 GTPBP4Q9BZE4 634 aaKnown RBP10.76□□□□□ -0.69
HPS4-203ENST00000402105 TM6SF1Q9BZW5 370 aa10.76□□□□□ -0.69
HPS4-203ENST00000402105 TMC6Q7Z403 805 aa10.76□□□□□ -0.69
HPS4-203ENST00000402105 LRRC8AQ8IWT6 810 aa10.76□□□□□ -0.69
HPS4-203ENST00000402105 PLEKHO1Q53GL0 409 aaPredicted RBP10.75□□□□□ -0.69
HPS4-203ENST00000402105 USP28Q96RU2 1077 aa10.75□□□□□ -0.69
HPS4-203ENST00000402105 DBNDD2Q9BQY9 259 aa10.75□□□□□ -0.69
HPS4-203ENST00000402105 SNRKQ9NRH2 765 aa10.75□□□□□ -0.69
HPS4-203ENST00000402105 GJB4Q9NTQ9 266 aa10.75□□□□□ -0.69
HPS4-203ENST00000402105 ANKRD26Q9UPS8 1709 aa10.75□□□□□ -0.69
HPS4-203ENST00000402105 A0A0G2JLW4 131 aa10.75□□□□□ -0.69
HPS4-203ENST00000402105 COPS6Q7L5N1 327 aa10.75□□□□□ -0.69
HPS4-203ENST00000402105 GTF3C6Q969F1 213 aa10.75□□□□□ -0.69
HPS4-203ENST00000402105 SCRN1Q12765 414 aa10.75□□□□□ -0.69
HPS4-203ENST00000402105 STK38Q15208 465 aa10.75□□□□□ -0.69
HPS4-203ENST00000402105 EPHA10Q5JZY3 1008 aa10.75□□□□□ -0.69
HPS4-203ENST00000402105 SYT10Q6XYQ8 523 aa10.75□□□□□ -0.69
HPS4-203ENST00000402105 OGFRQ9NZT2 677 aa10.75□□□□□ -0.69
HPS4-203ENST00000402105 PTPDC1A2A3K4 754 aa10.74□□□□□ -0.69
HPS4-203ENST00000402105 ZC3H6P61129 1189 aaKnown RBP10.74□□□□□ -0.69
HPS4-203ENST00000402105 FKBP4Q02790 459 aaKnown RBP eCLIP10.74□□□□□ -0.69
HPS4-203ENST00000402105 GNL2Q13823 731 aaKnown RBP10.74□□□□□ -0.69
HPS4-203ENST00000402105 XAGE3Q8WTP9 111 aa10.74□□□□□ -0.69
HPS4-203ENST00000402105 PAXBP1Q9Y5B6 917 aa10.74□□□□□ -0.69
HPS4-203ENST00000402105 POLR3GO15318 223 aaPredicted RBP10.74□□□□□ -0.69
HPS4-203ENST00000402105 TAF5LO75529 589 aa10.74□□□□□ -0.69
HPS4-203ENST00000402105 CYP21A2P08686 494 aa10.74□□□□□ -0.69
HPS4-203ENST00000402105 KCNA6P17658 529 aa10.74□□□□□ -0.69
HPS4-203ENST00000402105 LMOD1P29536 600 aaPredicted RBP10.74□□□□□ -0.69
HPS4-203ENST00000402105 TIMM10P62072 90 aa10.74□□□□□ -0.69
HPS4-203ENST00000402105 STX1AQ16623 288 aa10.74□□□□□ -0.69
HPS4-203ENST00000402105 WASHC4Q2M389 1173 aa10.74□□□□□ -0.69
HPS4-203ENST00000402105 GOLPH3LQ9H4A5 285 aa10.74□□□□□ -0.69
HPS4-203ENST00000402105 GPHNQ9NQX3 736 aaPredicted RBP10.74□□□□□ -0.69
HPS4-203ENST00000402105 TTC21AQ8NDW8 1320 aa10.74□□□□□ -0.69
HPS4-203ENST00000402105 GOLGA8FQ08AF8 430 aa10.74□□□□□ -0.69
HPS4-203ENST00000402105 GOLGA8DPQ0D2H9 430 aa10.74□□□□□ -0.69
HPS4-203ENST00000402105 CEP57L1Q8IYX8 460 aa10.74□□□□□ -0.69
HPS4-203ENST00000402105 KIF18AQ8NI77 898 aa10.74□□□□□ -0.69
HPS4-203ENST00000402105 ANKRD7Q92527 254 aa10.74□□□□□ -0.69
HPS4-203ENST00000402105 ADCY9O60503 1353 aa10.73□□□□□ -0.69
HPS4-203ENST00000402105 RIMBP3CA6NJZ7 1639 aa10.73□□□□□ -0.69
HPS4-203ENST00000402105 RIMBP3BA6NNM3 1639 aa10.73□□□□□ -0.69
HPS4-203ENST00000402105 RIMBP3Q9UFD9 1639 aa10.73□□□□□ -0.69
HPS4-203ENST00000402105 OVOS2A0A0J9YW53 1432 aa10.73□□□□□ -0.69
HPS4-203ENST00000402105 CDK11BP21127 795 aaKnown RBP10.73□□□□□ -0.69
HPS4-203ENST00000402105 ERCC6LQ2NKX8 1250 aa10.73□□□□□ -0.69
HPS4-203ENST00000402105 OVOS2Q6IE36 1432 aa10.73□□□□□ -0.69
HPS4-203ENST00000402105 PLA2G4DQ86XP0 818 aa10.73□□□□□ -0.69
HPS4-203ENST00000402105 NEO1Q92859 1461 aa10.73□□□□□ -0.69
HPS4-203ENST00000402105 IFNKQ9P0W0 207 aa10.73□□□□□ -0.69
HPS4-203ENST00000402105 HDAC5Q9UQL6 1122 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms