RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 C1orf167Q5SNV9 1468 aa4.85□□□□□ -1.63
CLHC1-201ENST00000401408 RIMBP2O15034 1052 aa4.85□□□□□ -1.63
CLHC1-201ENST00000401408 PLIN1O60240 522 aa4.85□□□□□ -1.63
CLHC1-201ENST00000401408 FOSP01100 380 aaPredicted RBP4.85□□□□□ -1.63
CLHC1-201ENST00000401408 VIL1P09327 827 aaKnown RBP4.85□□□□□ -1.63
CLHC1-201ENST00000401408 SSTR3P32745 418 aaPredicted RBP4.85□□□□□ -1.63
CLHC1-201ENST00000401408 C1QTNF8P60827 252 aa4.85□□□□□ -1.63
CLHC1-201ENST00000401408 AMPD3Q01432 767 aa4.85□□□□□ -1.63
CLHC1-201ENST00000401408 MRPL58Q14197 206 aaKnown RBP4.85□□□□□ -1.63
CLHC1-201ENST00000401408 HIC1Q14526 733 aa4.85□□□□□ -1.63
CLHC1-201ENST00000401408 MAPRE1Q15691 268 aaKnown RBP4.85□□□□□ -1.63
CLHC1-201ENST00000401408 CC2D1AQ6P1N0 951 aaPredicted RBP4.85□□□□□ -1.63
CLHC1-201ENST00000401408 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.85□□□□□ -1.63
CLHC1-201ENST00000401408 METTL16Q86W50 562 aaKnown RBP4.85□□□□□ -1.63
CLHC1-201ENST00000401408 WDR75Q8IWA0 830 aaKnown RBP4.85□□□□□ -1.63
CLHC1-201ENST00000401408 UCN2Q96RP3 112 aa4.85□□□□□ -1.63
CLHC1-201ENST00000401408 MKRN1Q9UHC7 482 aaKnown RBP4.85□□□□□ -1.63
CLHC1-201ENST00000401408 PXDNQ92626 1479 aa4.84□□□□□ -1.63
CLHC1-201ENST00000401408 IFRD1O00458 451 aaPredicted RBP4.84□□□□□ -1.63
CLHC1-201ENST00000401408 DPYSL4O14531 572 aa4.84□□□□□ -1.63
CLHC1-201ENST00000401408 NPHP1O15259 732 aa4.84□□□□□ -1.63
CLHC1-201ENST00000401408 CBFA2T2O43439 604 aa4.84□□□□□ -1.63
CLHC1-201ENST00000401408 TNNI2P48788 182 aa4.84□□□□□ -1.63
CLHC1-201ENST00000401408 IRX3P78415 501 aaPredicted RBP4.84□□□□□ -1.63
CLHC1-201ENST00000401408 CC2D1BQ5T0F9 858 aaKnown RBP4.84□□□□□ -1.63
CLHC1-201ENST00000401408 SOGA3Q5TF21 947 aa4.84□□□□□ -1.63
CLHC1-201ENST00000401408 RUNDC1Q96C34 613 aa4.84□□□□□ -1.63
CLHC1-201ENST00000401408 MYCBPQ99417 103 aaPredicted RBP4.84□□□□□ -1.63
CLHC1-201ENST00000401408 ARPC5LQ9BPX5 153 aa4.84□□□□□ -1.63
CLHC1-201ENST00000401408 TGIF2Q9GZN2 237 aa4.84□□□□□ -1.63
CLHC1-201ENST00000401408 CRISPLD2Q9H0B8 497 aa4.84□□□□□ -1.63
CLHC1-201ENST00000401408 IFT122Q9HBG6 1241 aa4.84□□□□□ -1.63
CLHC1-201ENST00000401408 ZMIZ1Q9ULJ6 1067 aa4.84□□□□□ -1.63
CLHC1-201ENST00000401408 NUP188Q5SRE5 1749 aa4.84□□□□□ -1.63
CLHC1-201ENST00000401408 NINLQ9Y2I6 1382 aa4.84□□□□□ -1.63
CLHC1-201ENST00000401408 RPRD2Q5VT52 1461 aaKnown RBP4.84□□□□□ -1.63
CLHC1-201ENST00000401408 CROCC2H7BZ55 1655 aa4.84□□□□□ -1.64
CLHC1-201ENST00000401408 CLCN1P35523 988 aa4.84□□□□□ -1.64
CLHC1-201ENST00000401408 GNALP38405 381 aa4.84□□□□□ -1.64
CLHC1-201ENST00000401408 NEXNQ0ZGT2 675 aa4.84□□□□□ -1.64
CLHC1-201ENST00000401408 SF3B2Q13435 895 aaKnown RBP4.84□□□□□ -1.64
CLHC1-201ENST00000401408 GNL2Q13823 731 aaKnown RBP4.84□□□□□ -1.64
CLHC1-201ENST00000401408 SYCP2LQ5T4T6 812 aa4.84□□□□□ -1.64
CLHC1-201ENST00000401408 LDLRAD1Q5T700 205 aa4.84□□□□□ -1.64
CLHC1-201ENST00000401408 SVIPQ8NHG7 77 aa4.84□□□□□ -1.64
CLHC1-201ENST00000401408 PPM1EQ8WY54 764 aa4.84□□□□□ -1.64
CLHC1-201ENST00000401408 TSR2Q969E8 191 aaKnown RBP4.84□□□□□ -1.64
CLHC1-201ENST00000401408 IER2Q9BTL4 223 aa4.84□□□□□ -1.64
CLHC1-201ENST00000401408 LRRC27Q9C0I9 530 aa4.84□□□□□ -1.64
CLHC1-201ENST00000401408 ACBD3Q9H3P7 528 aa4.84□□□□□ -1.64
CLHC1-201ENST00000401408 AVENQ9NQS1 362 aaPredicted RBP4.84□□□□□ -1.64
CLHC1-201ENST00000401408 ANAPC4Q9UJX5 808 aa4.84□□□□□ -1.64
CLHC1-201ENST00000401408 ISY1Q9ULR0 285 aaKnown RBP4.84□□□□□ -1.64
CLHC1-201ENST00000401408 MAFBQ9Y5Q3 323 aaPredicted RBP4.84□□□□□ -1.64
CLHC1-201ENST00000401408 SENP3-EIF4A1A0A087X0R7 540 aa4.83□□□□□ -1.64
CLHC1-201ENST00000401408 FAM163BP0C2L3 166 aa4.83□□□□□ -1.64
CLHC1-201ENST00000401408 MPNDQ8N594 471 aa4.83□□□□□ -1.64
CLHC1-201ENST00000401408 TMEM87AQ8NBN3 555 aa4.83□□□□□ -1.64
CLHC1-201ENST00000401408 TMUB1Q9BVT8 246 aa4.83□□□□□ -1.64
CLHC1-201ENST00000401408 CARD10Q9BWT7 1032 aa4.83□□□□□ -1.64
CLHC1-201ENST00000401408 GPCPD1Q9NPB8 672 aa4.83□□□□□ -1.64
CLHC1-201ENST00000401408 NOL7Q9UMY1 257 aaKnown RBP4.83□□□□□ -1.64
CLHC1-201ENST00000401408 PRAG1Q86YV5 1406 aa4.83□□□□□ -1.64
CLHC1-201ENST00000401408 DYTNA2CJ06 578 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 PPP1R12AO14974 1030 aaPredicted RBP4.82□□□□□ -1.64
CLHC1-201ENST00000401408 CT47B1P0C2W7 299 aaPredicted RBP4.82□□□□□ -1.64
CLHC1-201ENST00000401408 TSPY4P0CV99 314 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 TSPY10P0CW01 314 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 MDM2Q00987 491 aaPredicted RBP4.82□□□□□ -1.64
CLHC1-201ENST00000401408 MTA1Q13330 715 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 R3HDM1Q15032 1099 aaKnown RBP4.82□□□□□ -1.64
CLHC1-201ENST00000401408 BRD3Q15059 726 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 TBC1D10BQ4KMP7 808 aaPredicted RBP4.82□□□□□ -1.64
CLHC1-201ENST00000401408 ANKRD23Q86SG2 305 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 RPAINQ86UA6 219 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 RSPH1Q8WYR4 309 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 GMLQ99445 158 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 SYNPO2Q9UMS6 1093 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 THRAP3Q9Y2W1 955 aaKnown RBP4.82□□□□□ -1.64
CLHC1-201ENST00000401408 PLCH1Q4KWH8 1693 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 CASZ1Q86V15 1759 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 NRAPQ86VF7 1730 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 IQGAP3Q86VI3 1631 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 USP32Q8NFA0 1604 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 HIP1RO75146 1068 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 FCHSD2O94868 740 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 COL6A1P12109 1028 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 XRCC5P13010 732 aaKnown RBP4.82□□□□□ -1.64
CLHC1-201ENST00000401408 VAC14Q08AM6 782 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 PDIA6Q15084 440 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 WASHC4Q2M389 1173 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 UNC5CLQ8IV45 518 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 SLC39A13Q96H72 371 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 MRFAP1L1Q96HT8 127 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 FRMD6Q96NE9 622 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 CEP89Q96ST8 783 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 MUC3BQ9H195 1237 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 STK17AQ9UEE5 414 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 LZTS1Q9Y250 596 aa4.82□□□□□ -1.64
CLHC1-201ENST00000401408 THSD7AQ9UPZ6 1657 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms