RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 URI1O94763 535 aaPredicted RBP9.74□□□□□ -0.85
CACNA1C-220ENST00000399655 FCHSD2O94868 740 aa9.74□□□□□ -0.85
CACNA1C-220ENST00000399655 CSRNP2Q9H175 543 aa9.74□□□□□ -0.85
CACNA1C-220ENST00000399655 I3L4J1 428 aa9.74□□□□□ -0.85
CACNA1C-220ENST00000399655 SCOCQ9UIL1 159 aa9.74□□□□□ -0.85
CACNA1C-220ENST00000399655 GCKP35557 465 aa9.74□□□□□ -0.85
CACNA1C-220ENST00000399655 SKILP12757 684 aa9.74□□□□□ -0.85
CACNA1C-220ENST00000399655 ATP2C2O75185 946 aa9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 FAM169AQ9Y6X4 670 aa9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 SENP3-EIF4A1A0A087X0R7 540 aa9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 TBC1D10BQ4KMP7 808 aaPredicted RBP9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 PPP6R3Q5H9R7 873 aaPredicted RBP9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 MYCBPQ99417 103 aaPredicted RBP9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 CAPN2P17655 700 aa9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 ZSCAN32Q9NX65 697 aa9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 PLEKHH1Q9ULM0 1364 aa9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 BTN2A1Q7KYR7 527 aa9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 SPDL1Q96EA4 605 aa9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 ANO10Q9NW15 660 aa9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 PAIP2BQ9ULR5 123 aaKnown RBP9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 RLBP1P12271 317 aa9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 PSMA4P25789 261 aaKnown RBP9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 AMPD3Q01432 767 aa9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 NBPF11Q86T75 865 aa9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 NEK1Q96PY6 1258 aa9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 CCDC25Q86WR0 208 aa9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 DTNBO60941 627 aa9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 CCDC159P0C7I6 412 aa9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 RANBP1P43487 201 aa9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 PPP1R21Q6ZMI0 780 aa9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 INF2Q27J81 1249 aa9.73□□□□□ -0.85
CACNA1C-220ENST00000399655 DEUP1Q05D60 604 aa9.72□□□□□ -0.85
CACNA1C-220ENST00000399655 RBM26Q5T8P6 1007 aaKnown RBP9.72□□□□□ -0.85
CACNA1C-220ENST00000399655 SKIP12755 728 aa9.72□□□□□ -0.85
CACNA1C-220ENST00000399655 GSTA5Q7RTV2 222 aa9.72□□□□□ -0.85
CACNA1C-220ENST00000399655 ANKRD30AQ9BXX3 1397 aa9.72□□□□□ -0.85
CACNA1C-220ENST00000399655 ATP2B1P20020 1258 aa9.72□□□□□ -0.85
CACNA1C-220ENST00000399655 XPCQ01831 940 aaPredicted RBP9.72□□□□□ -0.85
CACNA1C-220ENST00000399655 KRT32Q14532 448 aa9.72□□□□□ -0.85
CACNA1C-220ENST00000399655 NECAB1Q8N987 351 aa9.72□□□□□ -0.85
CACNA1C-220ENST00000399655 TDRD12Q587J7 1177 aaKnown RBP9.72□□□□□ -0.85
CACNA1C-220ENST00000399655 ZNF354CQ86Y25 554 aa9.72□□□□□ -0.85
CACNA1C-220ENST00000399655 PSMD7P51665 324 aa9.72□□□□□ -0.85
CACNA1C-220ENST00000399655 DAPK3O43293 454 aa9.72□□□□□ -0.85
CACNA1C-220ENST00000399655 PATL1Q86TB9 770 aaKnown RBP9.72□□□□□ -0.85
CACNA1C-220ENST00000399655 KIFC3Q9BVG8 833 aa9.72□□□□□ -0.85
CACNA1C-220ENST00000399655 MAP7D3Q8IWC1 876 aa9.71□□□□□ -0.85
CACNA1C-220ENST00000399655 PNISRQ8TF01 805 aaKnown RBP9.71□□□□□ -0.85
CACNA1C-220ENST00000399655 APOEP02649 317 aa9.71□□□□□ -0.85
CACNA1C-220ENST00000399655 GLE1Q53GS7 698 aaKnown RBP9.71□□□□□ -0.85
CACNA1C-220ENST00000399655 CCDC30Q5VVM6 783 aa9.71□□□□□ -0.85
CACNA1C-220ENST00000399655 RAB11FIP4Q86YS3 637 aa9.71□□□□□ -0.85
CACNA1C-220ENST00000399655 TRERF1Q96PN7 1200 aa9.71□□□□□ -0.85
CACNA1C-220ENST00000399655 PPP6R1Q9UPN7 881 aa9.71□□□□□ -0.85
CACNA1C-220ENST00000399655 RASEFQ8IZ41 740 aa9.71□□□□□ -0.85
CACNA1C-220ENST00000399655 PPP1R9AQ9ULJ8 1098 aa9.71□□□□□ -0.85
CACNA1C-220ENST00000399655 CIZ1Q9ULV3 898 aaPredicted RBP9.71□□□□□ -0.85
CACNA1C-220ENST00000399655 STK10O94804 968 aaKnown RBP9.71□□□□□ -0.85
CACNA1C-220ENST00000399655 CYP46A1Q9Y6A2 500 aa9.71□□□□□ -0.85
CACNA1C-220ENST00000399655 NEK2P51955 445 aa9.71□□□□□ -0.86
CACNA1C-220ENST00000399655 EVA1CP58658 441 aa9.71□□□□□ -0.86
CACNA1C-220ENST00000399655 MUM1Q2TAK8 710 aa9.71□□□□□ -0.86
CACNA1C-220ENST00000399655 CTNNA3Q9UI47 895 aa9.71□□□□□ -0.86
CACNA1C-220ENST00000399655 FAM76AQ8TAV0 307 aa9.71□□□□□ -0.86
CACNA1C-220ENST00000399655 CCDC152Q4G0S7 254 aa9.71□□□□□ -0.86
CACNA1C-220ENST00000399655 CHMP6Q96FZ7 201 aa9.71□□□□□ -0.86
CACNA1C-220ENST00000399655 WWC3Q9ULE0 1092 aa9.71□□□□□ -0.86
CACNA1C-220ENST00000399655 VAV2P52735 878 aa9.71□□□□□ -0.86
CACNA1C-220ENST00000399655 C16orf72Q14CZ0 275 aa9.71□□□□□ -0.86
CACNA1C-220ENST00000399655 CHMP7Q8WUX9 453 aaPredicted RBP9.71□□□□□ -0.86
CACNA1C-220ENST00000399655 CUL5Q93034 780 aa9.71□□□□□ -0.86
CACNA1C-220ENST00000399655 MRPL46Q9H2W6 279 aaKnown RBP9.71□□□□□ -0.86
CACNA1C-220ENST00000399655 TMCO4Q5TGY1 634 aa9.71□□□□□ -0.86
CACNA1C-220ENST00000399655 CNGA4Q8IV77 575 aa9.71□□□□□ -0.86
CACNA1C-220ENST00000399655 EPS15L1Q9UBC2 864 aa9.71□□□□□ -0.86
CACNA1C-220ENST00000399655 ZSCAN16Q9H4T2 348 aaPredicted RBP9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 SNW1Q13573 536 aaKnown RBP9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 TEX9Q8N6V9 391 aa9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 PRDM10Q9NQV6 1147 aa9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 EP400NLQ6ZTU2 488 aa9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 ARHGEF2Q92974 986 aaKnown RBP9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 SIL1Q9H173 461 aa9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 BIRC2Q13490 618 aa9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 ERMNQ8TAM6 284 aa9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 DCAF11Q8TEB1 546 aa9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 GJC2Q5T442 439 aaPredicted RBP9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 CWC27Q6UX04 472 aaKnown RBP9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 TSGA10Q9BZW7 698 aa9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 TSHZ2Q9NRE2 1034 aa9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 UACAQ9BZF9 1416 aa9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 ZCCHC6Q5VYS8 1495 aaKnown RBP9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 ATP2B2Q01814 1243 aa9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 KANK3Q6NY19 840 aa9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 RUFY4Q6ZNE9 571 aa9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 RABEP2Q9H5N1 569 aa9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 OPHN1O60890 802 aa9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 WBP4O75554 376 aaKnown RBP9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 UBAC1Q9BSL1 405 aa9.7□□□□□ -0.86
CACNA1C-220ENST00000399655 MX2P20592 715 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms