RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 AKAP4Q5JQC9 854 aa15.96■□□□□ 0.15
CACNA1C-211ENST00000399617 EPB41L2O43491 1005 aaKnown RBP15.96■□□□□ 0.14
CACNA1C-211ENST00000399617 RAB34Q9BZG1 259 aa15.96■□□□□ 0.14
CACNA1C-211ENST00000399617 FAM170AA1A519 330 aa15.96■□□□□ 0.14
CACNA1C-211ENST00000399617 CNNM3Q8NE01 707 aa15.96■□□□□ 0.14
CACNA1C-211ENST00000399617 PICK1Q9NRD5 415 aa15.96■□□□□ 0.14
CACNA1C-211ENST00000399617 MEIS3Q99687 375 aa15.95■□□□□ 0.14
CACNA1C-211ENST00000399617 TRIM27P14373 513 aa15.95■□□□□ 0.14
CACNA1C-211ENST00000399617 MKRN3Q13064 507 aaKnown RBP15.95■□□□□ 0.14
CACNA1C-211ENST00000399617 GBP2P32456 591 aaPredicted RBP15.95■□□□□ 0.14
CACNA1C-211ENST00000399617 AFMP43652 599 aa15.95■□□□□ 0.14
CACNA1C-211ENST00000399617 NAPAP54920 295 aa15.95■□□□□ 0.14
CACNA1C-211ENST00000399617 ZNF397Q8NF99 534 aaPredicted RBP15.95■□□□□ 0.14
CACNA1C-211ENST00000399617 ECHDC1Q9NTX5 307 aa15.95■□□□□ 0.14
CACNA1C-211ENST00000399617 DHX29Q7Z478 1369 aaKnown RBP15.95■□□□□ 0.14
CACNA1C-211ENST00000399617 MTIF2P46199 727 aaKnown RBP15.95■□□□□ 0.14
CACNA1C-211ENST00000399617 JAKMIP3Q5VZ66 844 aa15.95■□□□□ 0.14
CACNA1C-211ENST00000399617 TSPYL1Q9H0U9 437 aa15.95■□□□□ 0.14
CACNA1C-211ENST00000399617 QTRT2Q9H974 415 aaKnown RBP15.95■□□□□ 0.14
CACNA1C-211ENST00000399617 LDHBP07195 334 aaKnown RBP15.94■□□□□ 0.14
CACNA1C-211ENST00000399617 FKBP15Q5T1M5 1219 aa15.94■□□□□ 0.14
CACNA1C-211ENST00000399617 EVI5LQ96CN4 794 aa15.94■□□□□ 0.14
CACNA1C-211ENST00000399617 UQCRFS1P1P0C7P4 283 aa15.94■□□□□ 0.14
CACNA1C-211ENST00000399617 PRPF4BQ13523 1007 aaKnown RBP15.94■□□□□ 0.14
CACNA1C-211ENST00000399617 FAM43AQ8N2R8 423 aa15.94■□□□□ 0.14
CACNA1C-211ENST00000399617 SYNCQ9H7C4 482 aa15.94■□□□□ 0.14
CACNA1C-211ENST00000399617 URB2Q14146 1524 aaKnown RBP15.94■□□□□ 0.14
CACNA1C-211ENST00000399617 CCDC112Q8NEF3 446 aa15.94■□□□□ 0.14
CACNA1C-211ENST00000399617 PIK3R4Q99570 1358 aa15.94■□□□□ 0.14
CACNA1C-211ENST00000399617 KLF18A0A0U1RQI7 1052 aa15.94■□□□□ 0.14
CACNA1C-211ENST00000399617 TRIM37O94972 964 aa15.94■□□□□ 0.14
CACNA1C-211ENST00000399617 MBD3O95983 291 aa15.94■□□□□ 0.14
CACNA1C-211ENST00000399617 RBM10P98175 930 aaKnown RBP15.94■□□□□ 0.14
CACNA1C-211ENST00000399617 PTPN23Q9H3S7 1636 aa15.94■□□□□ 0.14
CACNA1C-211ENST00000399617 KDM5BQ9UGL1 1544 aa15.94■□□□□ 0.14
CACNA1C-211ENST00000399617 NCOA7Q8NI08 942 aa15.94■□□□□ 0.14
CACNA1C-211ENST00000399617 C8orf58Q8NAV2 365 aa15.93■□□□□ 0.14
CACNA1C-211ENST00000399617 ORC3Q9UBD5 711 aaPredicted RBP15.93■□□□□ 0.14
CACNA1C-211ENST00000399617 WDR97A6NE52 1622 aa15.93■□□□□ 0.14
CACNA1C-211ENST00000399617 BACH1O14867 736 aa15.93■□□□□ 0.14
CACNA1C-211ENST00000399617 TFCP2Q12800 502 aa15.93■□□□□ 0.14
CACNA1C-211ENST00000399617 ZNF594Q96JF6 807 aaPredicted RBP15.93■□□□□ 0.14
CACNA1C-211ENST00000399617 EYA3Q99504 573 aa15.93■□□□□ 0.14
CACNA1C-211ENST00000399617 TCP11L1Q9NUJ3 509 aa15.93■□□□□ 0.14
CACNA1C-211ENST00000399617 DDX39AO00148 427 aaKnown RBP15.93■□□□□ 0.14
CACNA1C-211ENST00000399617 CHMP2AO43633 222 aa15.93■□□□□ 0.14
CACNA1C-211ENST00000399617 SYCE3A1L190 88 aa15.93■□□□□ 0.14
CACNA1C-211ENST00000399617 CBFA2T2O43439 604 aa15.93■□□□□ 0.14
CACNA1C-211ENST00000399617 GJB2P29033 226 aa15.93■□□□□ 0.14
CACNA1C-211ENST00000399617 TNNI2P48788 182 aa15.93■□□□□ 0.14
CACNA1C-211ENST00000399617 CNGA1P29973 690 aa15.92■□□□□ 0.14
CACNA1C-211ENST00000399617 SPOUT1Q5T280 376 aaKnown RBP15.92■□□□□ 0.14
CACNA1C-211ENST00000399617 DPP8Q6V1X1 898 aaPredicted RBP15.92■□□□□ 0.14
CACNA1C-211ENST00000399617 NUP88Q99567 741 aaPredicted RBP15.92■□□□□ 0.14
CACNA1C-211ENST00000399617 GOLGA6L10A6NI86 522 aa15.92■□□□□ 0.14
CACNA1C-211ENST00000399617 TBCAO75347 108 aaKnown RBP15.92■□□□□ 0.14
CACNA1C-211ENST00000399617 A1BGP04217 495 aa15.92■□□□□ 0.14
CACNA1C-211ENST00000399617 MRPS9P82933 396 aaKnown RBP15.92■□□□□ 0.14
CACNA1C-211ENST00000399617 ZBTB9Q96C00 473 aa15.92■□□□□ 0.14
CACNA1C-211ENST00000399617 RSPH6AQ9H0K4 717 aa15.92■□□□□ 0.14
CACNA1C-211ENST00000399617 CIZ1Q9ULV3 898 aaPredicted RBP15.92■□□□□ 0.14
CACNA1C-211ENST00000399617 PHAXQ9H814 394 aaKnown RBP15.92■□□□□ 0.14
CACNA1C-211ENST00000399617 H0YHG0 523 aa15.92■□□□□ 0.14
CACNA1C-211ENST00000399617 ZMYM3Q14202 1370 aa15.92■□□□□ 0.14
CACNA1C-211ENST00000399617 TMOD4Q9NZQ9 345 aa15.92■□□□□ 0.14
CACNA1C-211ENST00000399617 ZMYND15Q9H091 742 aa15.92■□□□□ 0.14
CACNA1C-211ENST00000399617 MAEAQ7L5Y9 396 aa15.91■□□□□ 0.14
CACNA1C-211ENST00000399617 TEX14Q8IWB6 1497 aa15.91■□□□□ 0.14
CACNA1C-211ENST00000399617 FCHSD1Q86WN1 690 aa15.91■□□□□ 0.14
CACNA1C-211ENST00000399617 NEK1Q96PY6 1258 aa15.91■□□□□ 0.14
CACNA1C-211ENST00000399617 MYCLP12524 364 aaPredicted RBP15.91■□□□□ 0.14
CACNA1C-211ENST00000399617 SPA17Q15506 151 aa15.91■□□□□ 0.14
CACNA1C-211ENST00000399617 LAMC3Q9Y6N6 1575 aa15.91■□□□□ 0.14
CACNA1C-211ENST00000399617 ZGPATQ8N5A5 531 aaKnown RBP15.91■□□□□ 0.14
CACNA1C-211ENST00000399617 CPXCR1Q8N123 301 aa15.9■□□□□ 0.14
CACNA1C-211ENST00000399617 FSIP1Q8NA03 581 aa15.9■□□□□ 0.14
CACNA1C-211ENST00000399617 CCDC12Q8WUD4 166 aaPredicted RBP15.9■□□□□ 0.14
CACNA1C-211ENST00000399617 GRM8O00222 908 aa15.9■□□□□ 0.14
CACNA1C-211ENST00000399617 LMAN1P49257 510 aa15.9■□□□□ 0.14
CACNA1C-211ENST00000399617 DOK7Q18PE1 504 aa15.9■□□□□ 0.14
CACNA1C-211ENST00000399617 CCDC174Q6PII3 467 aa15.9■□□□□ 0.14
CACNA1C-211ENST00000399617 PCDH11XQ9BZA7 1347 aa15.9■□□□□ 0.14
CACNA1C-211ENST00000399617 PCDH11YQ9BZA8 1340 aa15.9■□□□□ 0.14
CACNA1C-211ENST00000399617 TMCO5BA8MYB1 307 aa15.9■□□□□ 0.14
CACNA1C-211ENST00000399617 GSTTP1A0A1W2PQM5 241 aa15.9■□□□□ 0.14
CACNA1C-211ENST00000399617 HOXC9P31274 260 aa15.9■□□□□ 0.14
CACNA1C-211ENST00000399617 TMEM110-MUSTN1A8MSY1 372 aa15.9■□□□□ 0.14
CACNA1C-211ENST00000399617 UBA7P41226 1012 aa15.9■□□□□ 0.14
CACNA1C-211ENST00000399617 KLHDC4Q8TBB5 520 aa15.9■□□□□ 0.14
CACNA1C-211ENST00000399617 EYA1Q99502 592 aa15.9■□□□□ 0.14
CACNA1C-211ENST00000399617 PAGR1Q9BTK6 254 aa15.9■□□□□ 0.14
CACNA1C-211ENST00000399617 BCCIPQ9P287 314 aaKnown RBP eCLIP15.9■□□□□ 0.14
CACNA1C-211ENST00000399617 CCDC87Q9NVE4 849 aa15.89■□□□□ 0.13
CACNA1C-211ENST00000399617 PTPDC1A2A3K4 754 aa15.89■□□□□ 0.13
CACNA1C-211ENST00000399617 ALDH1L2Q3SY69 923 aa15.89■□□□□ 0.13
CACNA1C-211ENST00000399617 MRVI1Q9Y6F6 885 aa15.89■□□□□ 0.13
CACNA1C-211ENST00000399617 UHRF1BP1Q6BDS2 1440 aa15.89■□□□□ 0.13
CACNA1C-211ENST00000399617 BRF1Q92994 677 aa15.89■□□□□ 0.13
CACNA1C-211ENST00000399617 ARL1P40616 181 aaPredicted RBP15.89■□□□□ 0.13
CACNA1C-211ENST00000399617 SLAIN2Q9P270 581 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms