RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 TNFAIP1Q13829 316 aa9.22□□□□□ -0.93
USP47-203ENST00000399455 NOM1Q5C9Z4 860 aaKnown RBP9.22□□□□□ -0.93
USP47-203ENST00000399455 LRSAM1Q6UWE0 723 aa9.22□□□□□ -0.93
USP47-203ENST00000399455 VAT1LQ9HCJ6 419 aa9.22□□□□□ -0.93
USP47-203ENST00000399455 ABCA8O94911 1581 aa9.22□□□□□ -0.93
USP47-203ENST00000399455 PABPC4Q13310 644 aaKnown RBP eCLIP9.22□□□□□ -0.934e-15■□□□□ 10.3
USP47-203ENST00000399455 RBM27Q9P2N5 1060 aaKnown RBP9.22□□□□□ -0.93
USP47-203ENST00000399455 SERPINC1P01008 464 aa9.21□□□□□ -0.93
USP47-203ENST00000399455 TTC6Q86TZ1 520 aa9.21□□□□□ -0.93
USP47-203ENST00000399455 ESR2Q92731 530 aa9.21□□□□□ -0.93
USP47-203ENST00000399455 DISP1Q96F81 1524 aa9.21□□□□□ -0.93
USP47-203ENST00000399455 SSR1P43307 286 aaKnown RBP9.21□□□□□ -0.93
USP47-203ENST00000399455 SLFN5Q08AF3 891 aa9.21□□□□□ -0.93
USP47-203ENST00000399455 IFIT1BQ5T764 474 aaKnown RBP9.21□□□□□ -0.93
USP47-203ENST00000399455 NCOA7Q8NI08 942 aa9.21□□□□□ -0.93
USP47-203ENST00000399455 CSADQ9Y600 493 aa9.21□□□□□ -0.93
USP47-203ENST00000399455 EIF4A2Q14240 407 aaKnown RBP9.21□□□□□ -0.93
USP47-203ENST00000399455 CCDC181Q5TID7 509 aa9.21□□□□□ -0.94
USP47-203ENST00000399455 CDCA7LQ96GN5 454 aa9.21□□□□□ -0.94
USP47-203ENST00000399455 SPC25Q9HBM1 224 aa9.21□□□□□ -0.94
USP47-203ENST00000399455 TCP11L1Q9NUJ3 509 aa9.21□□□□□ -0.94
USP47-203ENST00000399455 RTL9Q8NET4 1388 aa9.21□□□□□ -0.94
USP47-203ENST00000399455 ANKRD62A6NC57 917 aa9.21□□□□□ -0.94
USP47-203ENST00000399455 TAF12Q16514 161 aa9.21□□□□□ -0.94
USP47-203ENST00000399455 SYCP3Q8IZU3 236 aa9.21□□□□□ -0.94
USP47-203ENST00000399455 ERCC4Q92889 916 aaPredicted RBP9.21□□□□□ -0.94
USP47-203ENST00000399455 FERMT1Q9BQL6 677 aa9.21□□□□□ -0.94
USP47-203ENST00000399455 GOPCQ9HD26 462 aa9.21□□□□□ -0.94
USP47-203ENST00000399455 PLEKHH1Q9ULM0 1364 aa9.2□□□□□ -0.94
USP47-203ENST00000399455 BMS1Q14692 1282 aaKnown RBP9.2□□□□□ -0.94
USP47-203ENST00000399455 PLEKHG1Q9ULL1 1385 aa9.2□□□□□ -0.94
USP47-203ENST00000399455 GRM8O00222 908 aa9.2□□□□□ -0.94
USP47-203ENST00000399455 SEPT7Q16181 437 aaKnown RBP9.2□□□□□ -0.94
USP47-203ENST00000399455 FKBP15Q5T1M5 1219 aa9.2□□□□□ -0.94
USP47-203ENST00000399455 CNKSR1Q969H4 720 aa9.2□□□□□ -0.94
USP47-203ENST00000399455 F6X3S4 739 aa9.2□□□□□ -0.94
USP47-203ENST00000399455 PPIP5K2O43314 1243 aa9.2□□□□□ -0.94
USP47-203ENST00000399455 EPB41L2O43491 1005 aaKnown RBP9.2□□□□□ -0.94
USP47-203ENST00000399455 VPS36Q86VN1 386 aa9.2□□□□□ -0.94
USP47-203ENST00000399455 C2CD5Q86YS7 1000 aa9.2□□□□□ -0.94
USP47-203ENST00000399455 MBIPQ9NS73 344 aa9.2□□□□□ -0.94
USP47-203ENST00000399455 SLC4A8Q2Y0W8 1093 aa9.2□□□□□ -0.94
USP47-203ENST00000399455 PABPN1LA6NDY0 278 aaKnown RBP9.2□□□□□ -0.94
USP47-203ENST00000399455 TBCAO75347 108 aaKnown RBP9.2□□□□□ -0.94
USP47-203ENST00000399455 GBP2P32456 591 aaPredicted RBP9.2□□□□□ -0.94
USP47-203ENST00000399455 ANAPC15P60006 121 aa9.2□□□□□ -0.94
USP47-203ENST00000399455 MNS1Q8NEH6 495 aa9.2□□□□□ -0.94
USP47-203ENST00000399455 IL27Q8NEV9 243 aa9.2□□□□□ -0.94
USP47-203ENST00000399455 SPATA32Q96LK8 384 aa9.2□□□□□ -0.94
USP47-203ENST00000399455 ECHDC1Q9NTX5 307 aa9.2□□□□□ -0.94
USP47-203ENST00000399455 SHROOM2Q13796 1616 aa9.2□□□□□ -0.94
USP47-203ENST00000399455 CALM1P0DP23 149 aa9.2□□□□□ -0.94
USP47-203ENST00000399455 CALM2P0DP24 149 aa9.2□□□□□ -0.94
USP47-203ENST00000399455 CALM3P0DP25 149 aa9.2□□□□□ -0.94
USP47-203ENST00000399455 HMGN5P82970 282 aaKnown RBP9.2□□□□□ -0.94
USP47-203ENST00000399455 TARBP1Q13395 1621 aaKnown RBP9.2□□□□□ -0.94
USP47-203ENST00000399455 SPDYE3A6NKU9 549 aa9.19□□□□□ -0.94
USP47-203ENST00000399455 SMTNL1A8MU46 457 aa9.19□□□□□ -0.94
USP47-203ENST00000399455 PRIM1P49642 420 aaKnown RBP9.19□□□□□ -0.94
USP47-203ENST00000399455 PLCD3Q8N3E9 789 aa9.19□□□□□ -0.94
USP47-203ENST00000399455 RRP36Q96EU6 259 aaKnown RBP9.19□□□□□ -0.94
USP47-203ENST00000399455 ORAI2Q96SN7 254 aa9.19□□□□□ -0.94
USP47-203ENST00000399455 NAP1L4Q99733 375 aaKnown RBP9.19□□□□□ -0.94
USP47-203ENST00000399455 HMG20BQ9P0W2 317 aa9.19□□□□□ -0.94
USP47-203ENST00000399455 TMEM94Q12767 1356 aa9.19□□□□□ -0.94
USP47-203ENST00000399455 ERVV-2B6SEH9 535 aa9.19□□□□□ -0.94
USP47-203ENST00000399455 C8orf76Q96K31 380 aa9.19□□□□□ -0.94
USP47-203ENST00000399455 VSIG10Q8N0Z9 540 aa9.19□□□□□ -0.94
USP47-203ENST00000399455 MPNDQ8N594 471 aa9.19□□□□□ -0.94
USP47-203ENST00000399455 SH2B1Q9NRF2 756 aaPredicted RBP9.19□□□□□ -0.94
USP47-203ENST00000399455 STX8Q9UNK0 236 aa9.19□□□□□ -0.94
USP47-203ENST00000399455 DISP3Q9P2K9 1392 aa9.19□□□□□ -0.94
USP47-203ENST00000399455 WTAPQ15007 396 aa9.19□□□□□ -0.94
USP47-203ENST00000399455 NLGN1Q8N2Q7 840 aa9.19□□□□□ -0.94
USP47-203ENST00000399455 ARGLU1Q9NWB6 273 aaPredicted RBP9.19□□□□□ -0.94
USP47-203ENST00000399455 CCDC174Q6PII3 467 aa9.19□□□□□ -0.94
USP47-203ENST00000399455 CCDC117Q8IWD4 279 aaPredicted RBP9.19□□□□□ -0.94
USP47-203ENST00000399455 TNMDQ9H2S6 317 aa9.19□□□□□ -0.94
USP47-203ENST00000399455 HOMER2Q9NSB8 354 aa9.19□□□□□ -0.94
USP47-203ENST00000399455 PRPF40BQ6NWY9 871 aaKnown RBP9.19□□□□□ -0.94
USP47-203ENST00000399455 USP48Q86UV5 1035 aa9.19□□□□□ -0.94
USP47-203ENST00000399455 BABAM1Q9NWV8 329 aa9.19□□□□□ -0.94
USP47-203ENST00000399455 KIF1BO60333 1816 aa9.18□□□□□ -0.94
USP47-203ENST00000399455 PRAG1Q86YV5 1406 aa9.18□□□□□ -0.94
USP47-203ENST00000399455 PDE8AO60658 829 aa9.18□□□□□ -0.94
USP47-203ENST00000399455 C6orf50Q9HD87 102 aa9.18□□□□□ -0.94
USP47-203ENST00000399455 ARHGEF5Q12774 1597 aa9.18□□□□□ -0.94
USP47-203ENST00000399455 THRAP3Q9Y2W1 955 aaKnown RBP9.18□□□□□ -0.94
USP47-203ENST00000399455 M0QZ92 97 aa9.18□□□□□ -0.94
USP47-203ENST00000399455 DCAF15Q66K64 600 aa9.18□□□□□ -0.94
USP47-203ENST00000399455 IQCEQ6IPM2 695 aa9.18□□□□□ -0.94
USP47-203ENST00000399455 SULF1Q8IWU6 871 aa9.18□□□□□ -0.94
USP47-203ENST00000399455 WDR66Q8TBY9 1149 aa9.18□□□□□ -0.94
USP47-203ENST00000399455 ZBED4O75132 1171 aa9.18□□□□□ -0.94
USP47-203ENST00000399455 TTLL5Q6EMB2 1281 aa9.18□□□□□ -0.94
USP47-203ENST00000399455 EIF5P55010 431 aaKnown RBP9.18□□□□□ -0.94
USP47-203ENST00000399455 IRX3P78415 501 aaPredicted RBP9.18□□□□□ -0.94
USP47-203ENST00000399455 MSL1Q68DK7 614 aa9.18□□□□□ -0.94
USP47-203ENST00000399455 METAP2P50579 478 aaKnown RBP eCLIP9.17□□□□□ -0.94
USP47-203ENST00000399455 HIBADHP31937 336 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 576 ms