RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 C6orf50Q9HD87 102 aa13.27□□□□□ -0.28
CCDC144A-206ENST00000399273 PIK3R4Q99570 1358 aa13.27□□□□□ -0.28
CCDC144A-206ENST00000399273 SYCE3A1L190 88 aa13.27□□□□□ -0.29
CCDC144A-206ENST00000399273 PUS7Q96PZ0 661 aaKnown RBP13.27□□□□□ -0.29
CCDC144A-206ENST00000399273 SNX16P57768 344 aa13.27□□□□□ -0.29
CCDC144A-206ENST00000399273 STX1AQ16623 288 aa13.27□□□□□ -0.29
CCDC144A-206ENST00000399273 BEGAINQ9BUH8 593 aa13.27□□□□□ -0.29
CCDC144A-206ENST00000399273 MICU3Q86XE3 530 aa13.27□□□□□ -0.29
CCDC144A-206ENST00000399273 PDCL2Q8N4E4 241 aa13.27□□□□□ -0.29
CCDC144A-206ENST00000399273 CNNM2Q9H8M5 875 aa13.27□□□□□ -0.29
CCDC144A-206ENST00000399273 PARP3Q9Y6F1 533 aa13.27□□□□□ -0.29
CCDC144A-206ENST00000399273 STAT6P42226 847 aa13.27□□□□□ -0.29
CCDC144A-206ENST00000399273 KIAA0753Q2KHM9 967 aa13.27□□□□□ -0.29
CCDC144A-206ENST00000399273 HMG20BQ9P0W2 317 aa13.27□□□□□ -0.29
CCDC144A-206ENST00000399273 GOLGA6L9A6NEM1 432 aa13.26□□□□□ -0.29
CCDC144A-206ENST00000399273 GSDMDP57764 484 aa13.26□□□□□ -0.29
CCDC144A-206ENST00000399273 TMTC2Q8N394 836 aa13.26□□□□□ -0.29
CCDC144A-206ENST00000399273 TNNI2P48788 182 aa13.26□□□□□ -0.29
CCDC144A-206ENST00000399273 RASAL2Q9UJF2 1139 aa13.26□□□□□ -0.29
CCDC144A-206ENST00000399273 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCDC144A-206ENST00000399273 SNRPA1P09661 255 aaKnown RBP13.26□□□□□ -0.29
CCDC144A-206ENST00000399273 GNAQP50148 359 aa13.26□□□□□ -0.29
CCDC144A-206ENST00000399273 WTAPQ15007 396 aa13.26□□□□□ -0.29
CCDC144A-206ENST00000399273 NDC80O14777 642 aa13.26□□□□□ -0.29
CCDC144A-206ENST00000399273 BMP15O95972 392 aa13.26□□□□□ -0.29
CCDC144A-206ENST00000399273 MCM5P33992 734 aa13.26□□□□□ -0.29
CCDC144A-206ENST00000399273 C8orf37Q96NL8 207 aa13.26□□□□□ -0.29
CCDC144A-206ENST00000399273 NLRP3Q96P20 1036 aa13.26□□□□□ -0.29
CCDC144A-206ENST00000399273 PLCG2P16885 1265 aa13.26□□□□□ -0.29
CCDC144A-206ENST00000399273 CLIP2Q9UDT6 1046 aa13.26□□□□□ -0.29
CCDC144A-206ENST00000399273 LIMCH1Q9UPQ0 1083 aa13.26□□□□□ -0.29
CCDC144A-206ENST00000399273 UBE3BQ7Z3V4 1068 aa13.25□□□□□ -0.29
CCDC144A-206ENST00000399273 SLC26A6Q9BXS9 759 aa13.25□□□□□ -0.29
CCDC144A-206ENST00000399273 VEZTQ9HBM0 779 aa13.25□□□□□ -0.29
CCDC144A-206ENST00000399273 FERMT3Q86UX7 667 aa13.25□□□□□ -0.29
CCDC144A-206ENST00000399273 SELENOOQ9BVL4 669 aa13.25□□□□□ -0.29
CCDC144A-206ENST00000399273 CCDC155Q8N6L0 562 aa13.25□□□□□ -0.29
CCDC144A-206ENST00000399273 FSIP1Q8NA03 581 aa13.25□□□□□ -0.29
CCDC144A-206ENST00000399273 FAM107BQ9H098 131 aa13.25□□□□□ -0.29
CCDC144A-206ENST00000399273 CKAP4Q07065 602 aaKnown RBP13.25□□□□□ -0.29
CCDC144A-206ENST00000399273 JADE2Q9NQC1 790 aa13.25□□□□□ -0.29
CCDC144A-206ENST00000399273 SMARCC2Q8TAQ2 1214 aa13.25□□□□□ -0.29
CCDC144A-206ENST00000399273 WDR7Q9Y4E6 1490 aa13.24□□□□□ -0.29
CCDC144A-206ENST00000399273 MPNDQ8N594 471 aa13.24□□□□□ -0.29
CCDC144A-206ENST00000399273 WASLO00401 505 aaPredicted RBP13.24□□□□□ -0.29
CCDC144A-206ENST00000399273 ESR2Q92731 530 aa13.24□□□□□ -0.29
CCDC144A-206ENST00000399273 HEATR3Q7Z4Q2 680 aa13.24□□□□□ -0.29
CCDC144A-206ENST00000399273 SH3BP5O60239 455 aa13.24□□□□□ -0.29
CCDC144A-206ENST00000399273 TRIM47Q96LD4 638 aa13.24□□□□□ -0.29
CCDC144A-206ENST00000399273 TCHPQ9BT92 498 aa13.24□□□□□ -0.29
CCDC144A-206ENST00000399273 TEX14Q8IWB6 1497 aa13.24□□□□□ -0.29
CCDC144A-206ENST00000399273 CALM1P0DP23 149 aa13.24□□□□□ -0.29
CCDC144A-206ENST00000399273 CALM2P0DP24 149 aa13.24□□□□□ -0.29
CCDC144A-206ENST00000399273 CALM3P0DP25 149 aa13.24□□□□□ -0.29
CCDC144A-206ENST00000399273 CTR9Q6PD62 1173 aa13.24□□□□□ -0.29
CCDC144A-206ENST00000399273 CEP112Q8N8E3 955 aa13.24□□□□□ -0.29
CCDC144A-206ENST00000399273 NSD2O96028 1365 aa13.23□□□□□ -0.29
CCDC144A-206ENST00000399273 EIF2AK4Q9P2K8 1649 aaKnown RBP13.23□□□□□ -0.29
CCDC144A-206ENST00000399273 F8W031 263 aaPredicted RBP13.23□□□□□ -0.29
CCDC144A-206ENST00000399273 SMARCA5O60264 1052 aaPredicted RBP13.23□□□□□ -0.29
CCDC144A-206ENST00000399273 TSPOAP1O95153 1857 aa13.23□□□□□ -0.29
CCDC144A-206ENST00000399273 PICALMQ13492 652 aa13.23□□□□□ -0.29
CCDC144A-206ENST00000399273 NEMFO60524 1076 aa13.23□□□□□ -0.29
CCDC144A-206ENST00000399273 RBM10P98175 930 aaKnown RBP13.23□□□□□ -0.29
CCDC144A-206ENST00000399273 USP16Q9Y5T5 823 aa13.23□□□□□ -0.29
CCDC144A-206ENST00000399273 URI1O94763 535 aaPredicted RBP13.23□□□□□ -0.29
CCDC144A-206ENST00000399273 CTAGE1Q96RT6 745 aa13.23□□□□□ -0.29
CCDC144A-206ENST00000399273 ZFYP08048 801 aaPredicted RBP13.22□□□□□ -0.29
CCDC144A-206ENST00000399273 ATP2A1O14983 1001 aa13.22□□□□□ -0.29
CCDC144A-206ENST00000399273 KIAA1524Q8TCG1 905 aa13.22□□□□□ -0.29
CCDC144A-206ENST00000399273 BRDTQ58F21 947 aaPredicted RBP13.22□□□□□ -0.29
CCDC144A-206ENST00000399273 ANKRD24Q8TF21 1146 aa13.22□□□□□ -0.29
CCDC144A-206ENST00000399273 DDX19AQ9NUU7 478 aaKnown RBP13.22□□□□□ -0.29
CCDC144A-206ENST00000399273 RTCBQ9Y3I0 505 aaKnown RBP13.22□□□□□ -0.29
CCDC144A-206ENST00000399273 CEP135Q66GS9 1140 aa13.22□□□□□ -0.29
CCDC144A-206ENST00000399273 FAM212AQ96EL1 285 aa13.22□□□□□ -0.29
CCDC144A-206ENST00000399273 TXNDC16Q9P2K2 825 aa13.22□□□□□ -0.29
CCDC144A-206ENST00000399273 MRVI1Q9Y6F6 885 aa13.22□□□□□ -0.29
CCDC144A-206ENST00000399273 FLIIQ13045 1269 aa13.22□□□□□ -0.29
CCDC144A-206ENST00000399273 BMS1Q14692 1282 aaKnown RBP13.22□□□□□ -0.29
CCDC144A-206ENST00000399273 DPH6Q7L8W6 267 aa13.22□□□□□ -0.29
CCDC144A-206ENST00000399273 GSTA5Q7RTV2 222 aa13.22□□□□□ -0.29
CCDC144A-206ENST00000399273 ZC3H12CQ9C0D7 883 aaKnown RBP13.22□□□□□ -0.29
CCDC144A-206ENST00000399273 PICK1Q9NRD5 415 aa13.22□□□□□ -0.29
CCDC144A-206ENST00000399273 MAP7D1Q3KQU3 841 aa13.21□□□□□ -0.29
CCDC144A-206ENST00000399273 MAATS1Q7Z4T9 603 aa13.21□□□□□ -0.29
CCDC144A-206ENST00000399273 WDR97A6NE52 1622 aa13.21□□□□□ -0.29
CCDC144A-206ENST00000399273 NAA16Q6N069 864 aaPredicted RBP13.21□□□□□ -0.29
CCDC144A-206ENST00000399273 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCDC144A-206ENST00000399273 V9GYY5 206 aaPredicted RBP13.21□□□□□ -0.29
CCDC144A-206ENST00000399273 NPHP3Q7Z494 1330 aa13.21□□□□□ -0.29
CCDC144A-206ENST00000399273 ERICH4A6NGS2 130 aa13.21□□□□□ -0.29
CCDC144A-206ENST00000399273 CYP7A1P22680 504 aa13.21□□□□□ -0.29
CCDC144A-206ENST00000399273 CPLX3Q8WVH0 158 aa13.21□□□□□ -0.29
CCDC144A-206ENST00000399273 DENND4BO75064 1496 aaPredicted RBP13.21□□□□□ -0.29
CCDC144A-206ENST00000399273 ZCRB1Q8TBF4 217 aaKnown RBP13.21□□□□□ -0.29
CCDC144A-206ENST00000399273 TIGD1Q96MW7 591 aa13.21□□□□□ -0.29
CCDC144A-206ENST00000399273 TFCP2L1Q9NZI6 479 aa13.21□□□□□ -0.29
CCDC144A-206ENST00000399273 NAPAP54920 295 aa13.21□□□□□ -0.3
CCDC144A-206ENST00000399273 RTN1Q16799 776 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms