RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 CCDC191Q8NCU4 936 aa14.17□□□□□ -0.14
COL25A1-202ENST00000399127 DNAJC2Q99543 621 aaKnown RBP14.17□□□□□ -0.14
COL25A1-202ENST00000399127 CASTP20810 708 aaKnown RBP14.17□□□□□ -0.14
COL25A1-202ENST00000399127 KCNJ4P48050 445 aa14.17□□□□□ -0.14
COL25A1-202ENST00000399127 VPS72Q15906 364 aa14.17□□□□□ -0.14
COL25A1-202ENST00000399127 ADCK5Q3MIX3 580 aa14.17□□□□□ -0.14
COL25A1-202ENST00000399127 NEUROD6Q96NK8 337 aa14.17□□□□□ -0.14
COL25A1-202ENST00000399127 EPB41L2O43491 1005 aaKnown RBP14.16□□□□□ -0.14
COL25A1-202ENST00000399127 DTNBO60941 627 aa14.16□□□□□ -0.14
COL25A1-202ENST00000399127 BCL9LQ86UU0 1499 aa14.16□□□□□ -0.14
COL25A1-202ENST00000399127 IL17RAQ96F46 866 aa14.16□□□□□ -0.14
COL25A1-202ENST00000399127 TJP1Q07157 1748 aa14.16□□□□□ -0.14
COL25A1-202ENST00000399127 LRP6O75581 1613 aa14.16□□□□□ -0.14
COL25A1-202ENST00000399127 COL15A1P39059 1388 aa14.16□□□□□ -0.14
COL25A1-202ENST00000399127 CCDC171Q6TFL3 1326 aa14.16□□□□□ -0.14
COL25A1-202ENST00000399127 LRRC24Q50LG9 513 aa14.16□□□□□ -0.14
COL25A1-202ENST00000399127 FAM89AQ96GI7 184 aa14.16□□□□□ -0.14
COL25A1-202ENST00000399127 SLC4A9Q96Q91 983 aa14.16□□□□□ -0.14
COL25A1-202ENST00000399127 GOLGA6L22H0YM25 854 aa14.15□□□□□ -0.14
COL25A1-202ENST00000399127 AK2P54819 239 aa14.15□□□□□ -0.14
COL25A1-202ENST00000399127 TIMM10P62072 90 aa14.15□□□□□ -0.14
COL25A1-202ENST00000399127 CUL4AQ13619 759 aa14.15□□□□□ -0.14
COL25A1-202ENST00000399127 ATG9AQ7Z3C6 839 aa14.15□□□□□ -0.14
COL25A1-202ENST00000399127 FNBP4Q8N3X1 1017 aaPredicted RBP14.15□□□□□ -0.14
COL25A1-202ENST00000399127 JAKMIP1Q96N16 626 aaKnown RBP14.15□□□□□ -0.14
COL25A1-202ENST00000399127 NWD2Q9ULI1 1742 aa14.15□□□□□ -0.14
COL25A1-202ENST00000399127 ITGB4P16144 1822 aa14.15□□□□□ -0.14
COL25A1-202ENST00000399127 STARD3NLO95772 234 aa14.15□□□□□ -0.14
COL25A1-202ENST00000399127 GPTP24298 496 aa14.15□□□□□ -0.14
COL25A1-202ENST00000399127 KIF6Q6ZMV9 814 aa14.15□□□□□ -0.14
COL25A1-202ENST00000399127 DDX46Q7L014 1031 aaKnown RBP14.15□□□□□ -0.14
COL25A1-202ENST00000399127 ZNF589Q86UQ0 364 aaPredicted RBP14.15□□□□□ -0.14
COL25A1-202ENST00000399127 SYNE4Q8N205 404 aa14.15□□□□□ -0.14
COL25A1-202ENST00000399127 PUS3Q9BZE2 481 aaKnown RBP14.15□□□□□ -0.14
COL25A1-202ENST00000399127 RBM8AQ9Y5S9 174 aaKnown RBP14.15□□□□□ -0.14
COL25A1-202ENST00000399127 BCL9O00512 1426 aa14.15□□□□□ -0.14
COL25A1-202ENST00000399127 GOLGA6L3A6NEY3 463 aa14.14□□□□□ -0.15
COL25A1-202ENST00000399127 ATP5JP18859 108 aa14.14□□□□□ -0.15
COL25A1-202ENST00000399127 TCIRG1Q13488 830 aa14.14□□□□□ -0.15
COL25A1-202ENST00000399127 COL9A3Q14050 684 aaPredicted RBP14.14□□□□□ -0.15
COL25A1-202ENST00000399127 HLFQ16534 295 aa14.14□□□□□ -0.15
COL25A1-202ENST00000399127 FOXD4L6Q3SYB3 417 aaPredicted RBP14.14□□□□□ -0.15
COL25A1-202ENST00000399127 FOXD4L3Q6VB84 417 aaPredicted RBP14.14□□□□□ -0.15
COL25A1-202ENST00000399127 CLEC17AQ6ZS10 378 aa14.14□□□□□ -0.15
COL25A1-202ENST00000399127 TTC14Q96N46 770 aa14.14□□□□□ -0.15
COL25A1-202ENST00000399127 ISCA1Q9BUE6 129 aa14.14□□□□□ -0.15
COL25A1-202ENST00000399127 WNK3Q9BYP7 1800 aa14.14□□□□□ -0.15
COL25A1-202ENST00000399127 HIP1O00291 1037 aa14.13□□□□□ -0.15
COL25A1-202ENST00000399127 RUFY3Q7L099 469 aa14.13□□□□□ -0.15
COL25A1-202ENST00000399127 DDX49Q9Y6V7 483 aaKnown RBP14.13□□□□□ -0.15
COL25A1-202ENST00000399127 NECTIN1Q15223 517 aa14.13□□□□□ -0.15
COL25A1-202ENST00000399127 TEX13AQ9BXU3 409 aaPredicted RBP14.13□□□□□ -0.15
COL25A1-202ENST00000399127 TAF6LQ9Y6J9 622 aa14.13□□□□□ -0.15
COL25A1-202ENST00000399127 AFF2P51816 1311 aa14.13□□□□□ -0.15
COL25A1-202ENST00000399127 KCNQ2O43526 872 aa14.12□□□□□ -0.15
COL25A1-202ENST00000399127 CREB3L3Q68CJ9 461 aa14.12□□□□□ -0.15
COL25A1-202ENST00000399127 SEC62Q99442 399 aaKnown RBP14.12□□□□□ -0.15
COL25A1-202ENST00000399127 ZBTB1Q9Y2K1 713 aa14.12□□□□□ -0.15
COL25A1-202ENST00000399127 NCLP19338 710 aaKnown RBP14.12□□□□□ -0.15
COL25A1-202ENST00000399127 SKOR2Q2VWA4 1001 aaPredicted RBP14.12□□□□□ -0.15
COL25A1-202ENST00000399127 SLFNL1Q499Z3 407 aa14.12□□□□□ -0.15
COL25A1-202ENST00000399127 CCDC129Q6ZRS4 1044 aa14.12□□□□□ -0.15
COL25A1-202ENST00000399127 MAP4K1Q92918 833 aa14.12□□□□□ -0.15
COL25A1-202ENST00000399127 INTS4Q96HW7 963 aaKnown RBP14.12□□□□□ -0.15
COL25A1-202ENST00000399127 EYA2O00167 538 aa14.11□□□□□ -0.15
COL25A1-202ENST00000399127 PRPF40AO75400 957 aaKnown RBP14.11□□□□□ -0.15
COL25A1-202ENST00000399127 LARGE1O95461 756 aa14.11□□□□□ -0.15
COL25A1-202ENST00000399127 ZKSCAN1P17029 563 aaPredicted RBP14.11□□□□□ -0.15
COL25A1-202ENST00000399127 FAM182BQ5T319 152 aa14.11□□□□□ -0.15
COL25A1-202ENST00000399127 FSD2A1L4K1 749 aa14.11□□□□□ -0.15
COL25A1-202ENST00000399127 CYP19A1P11511 503 aaPredicted RBP14.11□□□□□ -0.15
COL25A1-202ENST00000399127 XRCC6P12956 609 aaKnown RBP eCLIP14.11□□□□□ -0.15
COL25A1-202ENST00000399127 IL15P40933 162 aaPredicted RBP14.11□□□□□ -0.15
COL25A1-202ENST00000399127 CCDC57Q2TAC2 916 aa14.11□□□□□ -0.15
COL25A1-202ENST00000399127 TCEANC2Q96MN5 208 aa14.11□□□□□ -0.15
COL25A1-202ENST00000399127 PDRG1Q9NUG6 133 aa14.11□□□□□ -0.15
COL25A1-202ENST00000399127 GOLIM4O00461 696 aa14.1□□□□□ -0.15
COL25A1-202ENST00000399127 SLC27A2O14975 620 aa14.1□□□□□ -0.15
COL25A1-202ENST00000399127 HAUS7Q99871 368 aa14.1□□□□□ -0.15
COL25A1-202ENST00000399127 LMBRD1Q9NUN5 540 aa14.1□□□□□ -0.15
COL25A1-202ENST00000399127 LIMCH1Q9UPQ0 1083 aa14.1□□□□□ -0.15
COL25A1-202ENST00000399127 TBC1D2BQ9UPU7 963 aa14.1□□□□□ -0.15
COL25A1-202ENST00000399127 CYP46A1Q9Y6A2 500 aa14.1□□□□□ -0.15
COL25A1-202ENST00000399127 MED23Q9ULK4 1368 aa14.1□□□□□ -0.15
COL25A1-202ENST00000399127 MAP3K15Q6ZN16 1313 aa14.1□□□□□ -0.15
COL25A1-202ENST00000399127 DOT1LQ8TEK3 1739 aa14.1□□□□□ -0.15
COL25A1-202ENST00000399127 L1TD1Q5T7N2 865 aaKnown RBP14.1□□□□□ -0.15
COL25A1-202ENST00000399127 PANK2Q9BZ23 570 aa14.1□□□□□ -0.15
COL25A1-202ENST00000399127 A0A1B0GUL7 405 aa14.09□□□□□ -0.15
COL25A1-202ENST00000399127 BRD1O95696 1058 aa14.09□□□□□ -0.15
COL25A1-202ENST00000399127 PTMSP20962 102 aa14.09□□□□□ -0.15
COL25A1-202ENST00000399127 GIGYF2Q6Y7W6 1299 aaKnown RBP14.09□□□□□ -0.15
COL25A1-202ENST00000399127 ZSWIM6Q9HCJ5 1215 aa14.09□□□□□ -0.15
COL25A1-202ENST00000399127 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.09□□□□□ -0.15
COL25A1-202ENST00000399127 TAF5LO75529 589 aa14.09□□□□□ -0.15
COL25A1-202ENST00000399127 ATP6V1AP38606 617 aa14.09□□□□□ -0.15
COL25A1-202ENST00000399127 GAS2L3Q86XJ1 694 aa14.09□□□□□ -0.15
COL25A1-202ENST00000399127 GJD4Q96KN9 370 aaPredicted RBP14.09□□□□□ -0.15
COL25A1-202ENST00000399127 ZNF609O15014 1411 aa14.09□□□□□ -0.15
COL25A1-202ENST00000399127 KLHL40Q2TBA0 621 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms