RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 SDSP20132 328 aa12.06□□□□□ -0.48
HMGCLL1-205ENST00000398661 MX1P20591 662 aa12.06□□□□□ -0.48
HMGCLL1-205ENST00000398661 MCM2P49736 904 aa12.06□□□□□ -0.48
HMGCLL1-205ENST00000398661 NEK4P51957 841 aa12.06□□□□□ -0.48
HMGCLL1-205ENST00000398661 FOXD4L6Q3SYB3 417 aaPredicted RBP12.06□□□□□ -0.48
HMGCLL1-205ENST00000398661 FOXD4L3Q6VB84 417 aaPredicted RBP12.06□□□□□ -0.48
HMGCLL1-205ENST00000398661 C16orf71Q8IYS4 520 aaPredicted RBP12.06□□□□□ -0.48
HMGCLL1-205ENST00000398661 ADCY9O60503 1353 aa12.06□□□□□ -0.48
HMGCLL1-205ENST00000398661 SMTNL1A8MU46 457 aa12.06□□□□□ -0.48
HMGCLL1-205ENST00000398661 BARGINQ6ZT62 677 aa12.06□□□□□ -0.48
HMGCLL1-205ENST00000398661 KIF18AQ8NI77 898 aa12.06□□□□□ -0.48
HMGCLL1-205ENST00000398661 ARHGAP45Q92619 1136 aa12.06□□□□□ -0.48
HMGCLL1-205ENST00000398661 KDM3BQ7LBC6 1761 aa12.06□□□□□ -0.48
HMGCLL1-205ENST00000398661 TNS2Q63HR2 1409 aa12.05□□□□□ -0.48
HMGCLL1-205ENST00000398661 GOLGA6L6A8MZA4 724 aa12.05□□□□□ -0.48
HMGCLL1-205ENST00000398661 AP5Z1O43299 807 aa12.05□□□□□ -0.48
HMGCLL1-205ENST00000398661 RIC3Q7Z5B4 369 aa12.05□□□□□ -0.48
HMGCLL1-205ENST00000398661 TBC1D2BQ9UPU7 963 aa12.05□□□□□ -0.48
HMGCLL1-205ENST00000398661 THRAP3Q9Y2W1 955 aaKnown RBP12.05□□□□□ -0.48
HMGCLL1-205ENST00000398661 C5P01031 1676 aa12.05□□□□□ -0.48
HMGCLL1-205ENST00000398661 ERC2O15083 957 aa12.05□□□□□ -0.48
HMGCLL1-205ENST00000398661 ITPK1Q13572 414 aa12.05□□□□□ -0.48
HMGCLL1-205ENST00000398661 LRP10Q7Z4F1 713 aa12.05□□□□□ -0.48
HMGCLL1-205ENST00000398661 SPC24Q8NBT2 197 aa12.05□□□□□ -0.48
HMGCLL1-205ENST00000398661 DCTPP1Q9H773 170 aa12.05□□□□□ -0.48
HMGCLL1-205ENST00000398661 DDX21Q9NR30 783 aaKnown RBP eCLIP12.05□□□□□ -0.48
HMGCLL1-205ENST00000398661 ZBTB1Q9Y2K1 713 aa12.05□□□□□ -0.48
HMGCLL1-205ENST00000398661 BCL9O00512 1426 aa12.04□□□□□ -0.48
HMGCLL1-205ENST00000398661 ATP6V1AP38606 617 aa12.04□□□□□ -0.48
HMGCLL1-205ENST00000398661 KRT222Q8N1A0 295 aa12.04□□□□□ -0.48
HMGCLL1-205ENST00000398661 TMEM87AQ8NBN3 555 aa12.04□□□□□ -0.48
HMGCLL1-205ENST00000398661 DNAAF4Q8WXU2 420 aa12.04□□□□□ -0.48
HMGCLL1-205ENST00000398661 INTS4Q96HW7 963 aaKnown RBP12.04□□□□□ -0.48
HMGCLL1-205ENST00000398661 MYD88Q99836 296 aa12.04□□□□□ -0.48
HMGCLL1-205ENST00000398661 USP44Q9H0E7 712 aa12.04□□□□□ -0.48
HMGCLL1-205ENST00000398661 BABAM1Q9NWV8 329 aa12.04□□□□□ -0.48
HMGCLL1-205ENST00000398661 CALCOCO1Q9P1Z2 691 aa12.04□□□□□ -0.48
HMGCLL1-205ENST00000398661 RGS17Q9UGC6 210 aaPredicted RBP12.04□□□□□ -0.48
HMGCLL1-205ENST00000398661 TRPC5Q9UL62 973 aaPredicted RBP12.04□□□□□ -0.48
HMGCLL1-205ENST00000398661 SIPA1L3O60292 1781 aaPredicted RBP12.04□□□□□ -0.48
HMGCLL1-205ENST00000398661 TRIM37O94972 964 aa12.04□□□□□ -0.48
HMGCLL1-205ENST00000398661 AMIGO3Q86WK7 504 aa12.04□□□□□ -0.48
HMGCLL1-205ENST00000398661 SYNE4Q8N205 404 aa12.04□□□□□ -0.48
HMGCLL1-205ENST00000398661 LRRFIP2Q9Y608 721 aaKnown RBP12.04□□□□□ -0.48
HMGCLL1-205ENST00000398661 TULP2O00295 520 aa12.03□□□□□ -0.48
HMGCLL1-205ENST00000398661 MAPK8IP2Q13387 824 aaPredicted RBP12.03□□□□□ -0.48
HMGCLL1-205ENST00000398661 OTUD7AQ8TE49 926 aaPredicted RBP12.03□□□□□ -0.48
HMGCLL1-205ENST00000398661 PTPRCP08575 1304 aa12.03□□□□□ -0.48
HMGCLL1-205ENST00000398661 GLI3P10071 1580 aa12.03□□□□□ -0.48
HMGCLL1-205ENST00000398661 PNMA6EA0A0J9YXQ4 647 aa12.03□□□□□ -0.48
HMGCLL1-205ENST00000398661 GPTP24298 496 aa12.03□□□□□ -0.48
HMGCLL1-205ENST00000398661 NAA30Q147X3 362 aaPredicted RBP12.03□□□□□ -0.48
HMGCLL1-205ENST00000398661 CCDC85AQ96PX6 553 aaPredicted RBP12.03□□□□□ -0.48
HMGCLL1-205ENST00000398661 FUCA2Q9BTY2 467 aa12.03□□□□□ -0.48
HMGCLL1-205ENST00000398661 WDR33Q9C0J8 1336 aaKnown RBP12.03□□□□□ -0.48
HMGCLL1-205ENST00000398661 LOC102724428A0A0B4J2F2 783 aa12.02□□□□□ -0.48
HMGCLL1-205ENST00000398661 IGKV5-2P06315 115 aa12.02□□□□□ -0.48
HMGCLL1-205ENST00000398661 CAPN2P17655 700 aa12.02□□□□□ -0.48
HMGCLL1-205ENST00000398661 SIK1P57059 783 aa12.02□□□□□ -0.48
HMGCLL1-205ENST00000398661 BEND3Q5T5X7 828 aa12.02□□□□□ -0.48
HMGCLL1-205ENST00000398661 POTEAQ6S8J7 498 aa12.02□□□□□ -0.48
HMGCLL1-205ENST00000398661 ITGB4P16144 1822 aa12.02□□□□□ -0.49
HMGCLL1-205ENST00000398661 ANKRD13DQ6ZTN6 518 aa12.02□□□□□ -0.49
HMGCLL1-205ENST00000398661 PTGS1P23219 599 aa12.01□□□□□ -0.49
HMGCLL1-205ENST00000398661 HLFQ16534 295 aa12.01□□□□□ -0.49
HMGCLL1-205ENST00000398661 KLHDC4Q8TBB5 520 aa12.01□□□□□ -0.49
HMGCLL1-205ENST00000398661 PAXBP1Q9Y5B6 917 aa12.01□□□□□ -0.49
HMGCLL1-205ENST00000398661 ADAMTS7Q9UKP4 1686 aa12.01□□□□□ -0.49
HMGCLL1-205ENST00000398661 KCPQ6ZWJ8 1503 aa12.01□□□□□ -0.49
HMGCLL1-205ENST00000398661 ERICH4A6NGS2 130 aa12.01□□□□□ -0.49
HMGCLL1-205ENST00000398661 KSR2Q6VAB6 950 aa12.01□□□□□ -0.49
HMGCLL1-205ENST00000398661 NOL8Q76FK4 1167 aaKnown RBP12.01□□□□□ -0.49
HMGCLL1-205ENST00000398661 KLHL34Q8N239 644 aa12.01□□□□□ -0.49
HMGCLL1-205ENST00000398661 CCDC112Q8NEF3 446 aa12.01□□□□□ -0.49
HMGCLL1-205ENST00000398661 C16orf45Q96MC5 204 aaPredicted RBP12.01□□□□□ -0.49
HMGCLL1-205ENST00000398661 SRCIN1Q9C0H9 1055 aa12.01□□□□□ -0.49
HMGCLL1-205ENST00000398661 HYPKQ9NX55 129 aa12.01□□□□□ -0.49
HMGCLL1-205ENST00000398661 EXOC6BQ9Y2D4 811 aa12.01□□□□□ -0.49
HMGCLL1-205ENST00000398661 DOT1LQ8TEK3 1739 aa12.01□□□□□ -0.49
HMGCLL1-205ENST00000398661 RPAP1Q9BWH6 1393 aaPredicted RBP12.01□□□□□ -0.49
HMGCLL1-205ENST00000398661 MRC1P22897 1456 aa12□□□□□ -0.49
HMGCLL1-205ENST00000398661 CYP19A1P11511 503 aaPredicted RBP12□□□□□ -0.49
HMGCLL1-205ENST00000398661 TNNT1P13805 278 aa12□□□□□ -0.49
HMGCLL1-205ENST00000398661 UBE2HP62256 183 aa12□□□□□ -0.49
HMGCLL1-205ENST00000398661 FAM193AP78312 1265 aa12□□□□□ -0.49
HMGCLL1-205ENST00000398661 TPRNQ4KMQ1 711 aa12□□□□□ -0.49
HMGCLL1-205ENST00000398661 ZNF397Q8NF99 534 aaPredicted RBP12□□□□□ -0.49
HMGCLL1-205ENST00000398661 CDCA7Q9BWT1 371 aaPredicted RBP12□□□□□ -0.49
HMGCLL1-205ENST00000398661 FAM53CQ9NYF3 392 aa12□□□□□ -0.49
HMGCLL1-205ENST00000398661 CNPY2Q9Y2B0 182 aa12□□□□□ -0.49
HMGCLL1-205ENST00000398661 PALLDQ8WX93 1383 aa12□□□□□ -0.49
HMGCLL1-205ENST00000398661 HOXB7P09629 217 aa12□□□□□ -0.49
HMGCLL1-205ENST00000398661 TSHZ3Q63HK5 1081 aa12□□□□□ -0.49
HMGCLL1-205ENST00000398661 GIMAP6Q6P9H5 292 aa12□□□□□ -0.49
HMGCLL1-205ENST00000398661 CEP85Q6P2H3 762 aa11.99□□□□□ -0.49
HMGCLL1-205ENST00000398661 TSPYL1Q9H0U9 437 aa11.99□□□□□ -0.49
HMGCLL1-205ENST00000398661 C9orf78Q9NZ63 289 aaPredicted RBP11.99□□□□□ -0.49
HMGCLL1-205ENST00000398661 TCHHQ07283 1943 aa11.99□□□□□ -0.49
HMGCLL1-205ENST00000398661 CRKLP46109 303 aaKnown RBP11.99□□□□□ -0.49
HMGCLL1-205ENST00000398661 PAXIP1Q6ZW49 1069 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms