RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SLC9C2Q5TAH2 1124 aa16.51■□□□□ 0.23
PCDHGA11-201ENST00000398587 TXLNBQ8N3L3 684 aa16.51■□□□□ 0.23
PCDHGA11-201ENST00000398587 INTS4Q96HW7 963 aaKnown RBP16.51■□□□□ 0.23
PCDHGA11-201ENST00000398587 NLRP5P59047 1200 aa16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 ODF2Q5BJF6 829 aa16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 CNNM3Q8NE01 707 aa16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 ACSBG1Q96GR2 724 aa16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 NLRP3Q96P20 1036 aa16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 NIP7Q9Y221 180 aaKnown RBP eCLIP16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 METTL22Q9BUU2 404 aaPredicted RBP16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 KRT23Q9C075 422 aa16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 PLA2R1Q13018 1463 aa16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 ZNF76P36508 570 aa16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 TFCP2Q12800 502 aa16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 TMTC2Q8N394 836 aa16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 LRRC2Q9BYS8 371 aa16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 USP19O94966 1318 aa16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 TSPY2A6NKD2 308 aa16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 CDR1P51861 262 aa16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 PLBD2Q8NHP8 589 aa16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 UTP14AQ9BVJ6 771 aaKnown RBP16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 CNNM2Q9H8M5 875 aa16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 RBM27Q9P2N5 1060 aaKnown RBP16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 KIF24Q5T7B8 1368 aa16.5■□□□□ 0.23
PCDHGA11-201ENST00000398587 RAB3GAP1Q15042 981 aa16.49■□□□□ 0.23
PCDHGA11-201ENST00000398587 CRNKL1Q9BZJ0 848 aaKnown RBP16.49■□□□□ 0.23
PCDHGA11-201ENST00000398587 ZBTB43O43298 467 aa16.49■□□□□ 0.23
PCDHGA11-201ENST00000398587 UVSSAQ2YD98 709 aa16.49■□□□□ 0.23
PCDHGA11-201ENST00000398587 OTUD7AQ8TE49 926 aaPredicted RBP16.49■□□□□ 0.23
PCDHGA11-201ENST00000398587 SETDB2Q96T68 719 aa16.49■□□□□ 0.23
PCDHGA11-201ENST00000398587 SYNMO15061 1565 aa16.49■□□□□ 0.23
PCDHGA11-201ENST00000398587 KIF2AO00139 706 aaPredicted RBP16.49■□□□□ 0.23
PCDHGA11-201ENST00000398587 ZNF165P49910 485 aa16.49■□□□□ 0.23
PCDHGA11-201ENST00000398587 ZSCAN23Q3MJ62 389 aa16.49■□□□□ 0.23
PCDHGA11-201ENST00000398587 CREB3L3Q68CJ9 461 aa16.49■□□□□ 0.23
PCDHGA11-201ENST00000398587 Q6ZUG5 572 aa16.49■□□□□ 0.23
PCDHGA11-201ENST00000398587 UGGT1Q9NYU2 1555 aa16.49■□□□□ 0.23
PCDHGA11-201ENST00000398587 AOX1Q06278 1338 aa16.49■□□□□ 0.23
PCDHGA11-201ENST00000398587 RNF113AO15541 343 aaKnown RBP16.49■□□□□ 0.23
PCDHGA11-201ENST00000398587 CYP7A1P22680 504 aa16.49■□□□□ 0.23
PCDHGA11-201ENST00000398587 WTAPQ15007 396 aa16.49■□□□□ 0.23
PCDHGA11-201ENST00000398587 CCDC144CPQ8IYA2 1237 aa16.49■□□□□ 0.23
PCDHGA11-201ENST00000398587 SLC26A6Q9BXS9 759 aa16.49■□□□□ 0.23
PCDHGA11-201ENST00000398587 RAB34Q9BZG1 259 aa16.49■□□□□ 0.23
PCDHGA11-201ENST00000398587 IRS4O14654 1257 aaPredicted RBP16.48■□□□□ 0.23
PCDHGA11-201ENST00000398587 TRMT2AQ8IZ69 625 aaKnown RBP16.48■□□□□ 0.23
PCDHGA11-201ENST00000398587 AATKQ6ZMQ8 1374 aa16.48■□□□□ 0.23
PCDHGA11-201ENST00000398587 AK2P54819 239 aa16.48■□□□□ 0.23
PCDHGA11-201ENST00000398587 SYCP1Q15431 976 aa16.48■□□□□ 0.23
PCDHGA11-201ENST00000398587 STX1AQ16623 288 aa16.48■□□□□ 0.23
PCDHGA11-201ENST00000398587 F13A1P00488 732 aa16.48■□□□□ 0.23
PCDHGA11-201ENST00000398587 EIF5P55010 431 aaKnown RBP16.48■□□□□ 0.23
PCDHGA11-201ENST00000398587 LRSAM1Q6UWE0 723 aa16.48■□□□□ 0.23
PCDHGA11-201ENST00000398587 RAB11FIP4Q86YS3 637 aa16.48■□□□□ 0.23
PCDHGA11-201ENST00000398587 FAM177A1Q8N128 213 aaPredicted RBP16.48■□□□□ 0.23
PCDHGA11-201ENST00000398587 SLC52A2Q9HAB3 445 aa16.48■□□□□ 0.23
PCDHGA11-201ENST00000398587 ESR2Q92731 530 aa16.47■□□□□ 0.23
PCDHGA11-201ENST00000398587 FAM135BQ49AJ0 1406 aa16.47■□□□□ 0.23
PCDHGA11-201ENST00000398587 KLHL10Q6JEL2 608 aa16.47■□□□□ 0.23
PCDHGA11-201ENST00000398587 ZCCHC11Q5TAX3 1644 aaKnown RBP16.47■□□□□ 0.23
PCDHGA11-201ENST00000398587 ABCC4O15439 1325 aa16.47■□□□□ 0.23
PCDHGA11-201ENST00000398587 EPB41L2O43491 1005 aaKnown RBP16.47■□□□□ 0.23
PCDHGA11-201ENST00000398587 EIF4A1P60842 406 aaKnown RBP16.47■□□□□ 0.23
PCDHGA11-201ENST00000398587 CCDC12Q8WUD4 166 aaPredicted RBP16.47■□□□□ 0.23
PCDHGA11-201ENST00000398587 CCDC171Q6TFL3 1326 aa16.47■□□□□ 0.23
PCDHGA11-201ENST00000398587 EFCAB6Q5THR3 1501 aa16.47■□□□□ 0.23
PCDHGA11-201ENST00000398587 PPFIA3O75145 1194 aa16.47■□□□□ 0.23
PCDHGA11-201ENST00000398587 NOM1Q5C9Z4 860 aaKnown RBP16.47■□□□□ 0.23
PCDHGA11-201ENST00000398587 CLIP2Q9UDT6 1046 aa16.47■□□□□ 0.23
PCDHGA11-201ENST00000398587 METP08581 1390 aa16.46■□□□□ 0.23
PCDHGA11-201ENST00000398587 UQCRHLA0A096LP55 91 aa16.46■□□□□ 0.23
PCDHGA11-201ENST00000398587 UQCRHP07919 91 aa16.46■□□□□ 0.23
PCDHGA11-201ENST00000398587 KAT14Q9H8E8 782 aa16.46■□□□□ 0.23
PCDHGA11-201ENST00000398587 CNPY2Q9Y2B0 182 aa16.46■□□□□ 0.23
PCDHGA11-201ENST00000398587 SLC4A4Q9Y6R1 1079 aa16.46■□□□□ 0.23
PCDHGA11-201ENST00000398587 CCDC96Q2M329 555 aa16.46■□□□□ 0.23
PCDHGA11-201ENST00000398587 ZFYVE27Q5T4F4 411 aa16.46■□□□□ 0.23
PCDHGA11-201ENST00000398587 USP48Q86UV5 1035 aa16.46■□□□□ 0.23
PCDHGA11-201ENST00000398587 PLEKHF1Q96S99 279 aa16.46■□□□□ 0.23
PCDHGA11-201ENST00000398587 EYA2O00167 538 aa16.46■□□□□ 0.22
PCDHGA11-201ENST00000398587 GSTO1P78417 241 aa16.46■□□□□ 0.22
PCDHGA11-201ENST00000398587 CCDC191Q8NCU4 936 aa16.46■□□□□ 0.22
PCDHGA11-201ENST00000398587 UBAP1LF5GYI3 381 aa16.45■□□□□ 0.22
PCDHGA11-201ENST00000398587 ZGPATQ8N5A5 531 aaKnown RBP16.45■□□□□ 0.22
PCDHGA11-201ENST00000398587 PNMA6EA0A0J9YXQ4 647 aa16.45■□□□□ 0.22
PCDHGA11-201ENST00000398587 HCLS1P14317 486 aaPredicted RBP16.45■□□□□ 0.22
PCDHGA11-201ENST00000398587 CCDC102BQ68D86 513 aa16.45■□□□□ 0.22
PCDHGA11-201ENST00000398587 ALG1Q9BT22 464 aa16.45■□□□□ 0.22
PCDHGA11-201ENST00000398587 BTG4Q9NY30 223 aa16.45■□□□□ 0.22
PCDHGA11-201ENST00000398587 IQSEC3Q9UPP2 1182 aaPredicted RBP16.45■□□□□ 0.22
PCDHGA11-201ENST00000398587 ZNF521Q96K83 1311 aa16.45■□□□□ 0.22
PCDHGA11-201ENST00000398587 NEMFO60524 1076 aa16.45■□□□□ 0.22
PCDHGA11-201ENST00000398587 TOP1P11387 765 aaKnown RBP16.45■□□□□ 0.22
PCDHGA11-201ENST00000398587 RBM10P98175 930 aaKnown RBP16.45■□□□□ 0.22
PCDHGA11-201ENST00000398587 ARHGAP29Q52LW3 1261 aa16.45■□□□□ 0.22
PCDHGA11-201ENST00000398587 DHX32Q7L7V1 743 aaKnown RBP16.45■□□□□ 0.22
PCDHGA11-201ENST00000398587 KCNG4Q8TDN1 519 aa16.45■□□□□ 0.22
PCDHGA11-201ENST00000398587 CHD1O14646 1710 aa16.45■□□□□ 0.22
PCDHGA11-201ENST00000398587 PRC1O43663 620 aa16.44■□□□□ 0.22
PCDHGA11-201ENST00000398587 NBPF7P0C2Y1 421 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms