RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 PLEKHF1Q96S99 279 aa12.99□□□□□ -0.33
NIFKP1-201ENST00000398317 THUMPD2Q9BTF0 503 aaKnown RBP12.99□□□□□ -0.33
NIFKP1-201ENST00000398317 TAOK3Q9H2K8 898 aa12.99□□□□□ -0.33
NIFKP1-201ENST00000398317 NUP98P52948 1817 aa12.99□□□□□ -0.33
NIFKP1-201ENST00000398317 KDM3BQ7LBC6 1761 aa12.99□□□□□ -0.33
NIFKP1-201ENST00000398317 EMP3P54852 163 aa12.98□□□□□ -0.33
NIFKP1-201ENST00000398317 PLCB2Q00722 1185 aa12.98□□□□□ -0.33
NIFKP1-201ENST00000398317 LTBP3Q9NS15 1303 aa12.97□□□□□ -0.33
NIFKP1-201ENST00000398317 NFE2L2Q16236 605 aa12.97□□□□□ -0.33
NIFKP1-201ENST00000398317 GPR153Q6NV75 609 aa12.97□□□□□ -0.33
NIFKP1-201ENST00000398317 TPTE2Q6XPS3 522 aa12.97□□□□□ -0.33
NIFKP1-201ENST00000398317 RRP7AQ9Y3A4 280 aaKnown RBP12.97□□□□□ -0.33
NIFKP1-201ENST00000398317 DDNO94850 711 aaPredicted RBP12.96□□□□□ -0.33
NIFKP1-201ENST00000398317 HOXB1P14653 301 aaPredicted RBP12.96□□□□□ -0.33
NIFKP1-201ENST00000398317 NPR1P16066 1061 aa12.96□□□□□ -0.33
NIFKP1-201ENST00000398317 EIF4A1P60842 406 aaKnown RBP12.96□□□□□ -0.33
NIFKP1-201ENST00000398317 OLFM4Q6UX06 510 aa12.96□□□□□ -0.33
NIFKP1-201ENST00000398317 PNISRQ8TF01 805 aaKnown RBP12.96□□□□□ -0.33
NIFKP1-201ENST00000398317 C7orf43Q8WVR3 580 aa12.96□□□□□ -0.33
NIFKP1-201ENST00000398317 KLRG2A4D1S0 409 aaPredicted RBP12.95□□□□□ -0.34
NIFKP1-201ENST00000398317 MFSD10Q14728 455 aa12.95□□□□□ -0.34
NIFKP1-201ENST00000398317 SOGA3Q5TF21 947 aa12.95□□□□□ -0.34
NIFKP1-201ENST00000398317 TTLL7Q6ZT98 887 aa12.95□□□□□ -0.34
NIFKP1-201ENST00000398317 PCDHGA4Q9Y5G9 962 aa12.95□□□□□ -0.34
NIFKP1-201ENST00000398317 MAPK8IP3Q9UPT6 1336 aa12.94□□□□□ -0.34
NIFKP1-201ENST00000398317 MYL6BP14649 208 aa12.94□□□□□ -0.34
NIFKP1-201ENST00000398317 GTF2E1P29083 439 aaPredicted RBP12.94□□□□□ -0.34
NIFKP1-201ENST00000398317 CCDC93Q567U6 631 aa12.94□□□□□ -0.34
NIFKP1-201ENST00000398317 NUTM1Q86Y26 1132 aa12.94□□□□□ -0.34
NIFKP1-201ENST00000398317 JMYQ8N9B5 988 aa12.94□□□□□ -0.34
NIFKP1-201ENST00000398317 ZNF277Q9NRM2 450 aaPredicted RBP12.94□□□□□ -0.34
NIFKP1-201ENST00000398317 MAP3K15Q6ZN16 1313 aa12.93□□□□□ -0.34
NIFKP1-201ENST00000398317 FAM205CA6NFA0 338 aa12.93□□□□□ -0.34
NIFKP1-201ENST00000398317 NUDT7P0C024 238 aa12.93□□□□□ -0.34
NIFKP1-201ENST00000398317 GPTP24298 496 aa12.93□□□□□ -0.34
NIFKP1-201ENST00000398317 KIF6Q6ZMV9 814 aa12.93□□□□□ -0.34
NIFKP1-201ENST00000398317 ABCC12Q96J65 1359 aa12.93□□□□□ -0.34
NIFKP1-201ENST00000398317 ERVV-1B6SEH8 477 aa12.92□□□□□ -0.34
NIFKP1-201ENST00000398317 FKBP4Q02790 459 aaKnown RBP eCLIP12.92□□□□□ -0.34
NIFKP1-201ENST00000398317 PNNQ9H307 717 aaKnown RBP12.92□□□□□ -0.34
NIFKP1-201ENST00000398317 ZBTB3Q9H5J0 574 aa12.92□□□□□ -0.34
NIFKP1-201ENST00000398317 TSPYL4Q9UJ04 414 aa12.92□□□□□ -0.34
NIFKP1-201ENST00000398317 POTEB3A0JP26 581 aa12.91□□□□□ -0.34
NIFKP1-201ENST00000398317 ALDH1B1P30837 517 aa12.91□□□□□ -0.34
NIFKP1-201ENST00000398317 RIPK4P57078 832 aa12.91□□□□□ -0.34
NIFKP1-201ENST00000398317 POTEBQ6S5H4 581 aa12.91□□□□□ -0.34
NIFKP1-201ENST00000398317 SYNE4Q8N205 404 aa12.91□□□□□ -0.34
NIFKP1-201ENST00000398317 NYXQ9GZU5 481 aa12.91□□□□□ -0.34
NIFKP1-201ENST00000398317 ZSWIM6Q9HCJ5 1215 aa12.91□□□□□ -0.34
NIFKP1-201ENST00000398317 UBN2Q6ZU65 1347 aa12.9□□□□□ -0.34
NIFKP1-201ENST00000398317 ZNF541Q9H0D2 1346 aa12.9□□□□□ -0.34
NIFKP1-201ENST00000398317 SCN4AP35499 1836 aa12.9□□□□□ -0.34
NIFKP1-201ENST00000398317 SLC34A2O95436 690 aa12.9□□□□□ -0.34
NIFKP1-201ENST00000398317 EIF2S2P20042 333 aaKnown RBP12.9□□□□□ -0.34
NIFKP1-201ENST00000398317 SUSD4Q5VX71 490 aa12.9□□□□□ -0.34
NIFKP1-201ENST00000398317 RTKN2Q8IZC4 609 aa12.9□□□□□ -0.34
NIFKP1-201ENST00000398317 ANXA1P04083 346 aa12.89□□□□□ -0.35
NIFKP1-201ENST00000398317 RALBP1Q15311 655 aa12.89□□□□□ -0.35
NIFKP1-201ENST00000398317 SLC51AQ86UW1 340 aa12.89□□□□□ -0.35
NIFKP1-201ENST00000398317 IQCA1LA6NCM1 817 aa12.88□□□□□ -0.35
NIFKP1-201ENST00000398317 IARSP41252 1262 aaKnown RBP12.88□□□□□ -0.35
NIFKP1-201ENST00000398317 TMPOP42166 694 aaKnown RBP12.88□□□□□ -0.35
NIFKP1-201ENST00000398317 DDX10Q13206 875 aaKnown RBP12.88□□□□□ -0.35
NIFKP1-201ENST00000398317 PROSER3Q2NL68 480 aa12.88□□□□□ -0.35
NIFKP1-201ENST00000398317 CRY2Q49AN0 593 aa12.88□□□□□ -0.35
NIFKP1-201ENST00000398317 COL13A1Q5TAT6 717 aaPredicted RBP12.88□□□□□ -0.35
NIFKP1-201ENST00000398317 CCDC146Q8IYE0 955 aa12.88□□□□□ -0.35
NIFKP1-201ENST00000398317 ZNF34Q8IZ26 560 aa12.88□□□□□ -0.35
NIFKP1-201ENST00000398317 NECTIN2Q92692 538 aa12.88□□□□□ -0.35
NIFKP1-201ENST00000398317 RPGRQ92834 1020 aaKnown RBP12.88□□□□□ -0.35
NIFKP1-201ENST00000398317 TAF1DQ9H5J8 278 aaPredicted RBP12.88□□□□□ -0.35
NIFKP1-201ENST00000398317 EMILIN3Q9NT22 766 aa12.88□□□□□ -0.35
NIFKP1-201ENST00000398317 TCERG1O14776 1098 aaKnown RBP12.87□□□□□ -0.35
NIFKP1-201ENST00000398317 NTSR2O95665 410 aa12.87□□□□□ -0.35
NIFKP1-201ENST00000398317 PDIA6Q15084 440 aa12.87□□□□□ -0.35
NIFKP1-201ENST00000398317 NEUROD2Q15784 382 aa12.87□□□□□ -0.35
NIFKP1-201ENST00000398317 EAPPQ56P03 285 aaPredicted RBP12.87□□□□□ -0.35
NIFKP1-201ENST00000398317 GIGYF2Q6Y7W6 1299 aaKnown RBP12.87□□□□□ -0.35
NIFKP1-201ENST00000398317 LRP10Q7Z4F1 713 aa12.87□□□□□ -0.35
NIFKP1-201ENST00000398317 PTCD2Q8WV60 388 aaKnown RBP12.87□□□□□ -0.35
NIFKP1-201ENST00000398317 HS3ST6Q96QI5 342 aa12.87□□□□□ -0.35
NIFKP1-201ENST00000398317 ERBB4Q15303 1308 aa12.87□□□□□ -0.35
NIFKP1-201ENST00000398317 FZD9O00144 591 aa12.86□□□□□ -0.35
NIFKP1-201ENST00000398317 LDHDQ86WU2 507 aa12.86□□□□□ -0.35
NIFKP1-201ENST00000398317 RBM17Q96I25 401 aaKnown RBP12.86□□□□□ -0.35
NIFKP1-201ENST00000398317 MKRN1Q9UHC7 482 aaKnown RBP12.86□□□□□ -0.35
NIFKP1-201ENST00000398317 SNED1Q8TER0 1413 aa12.86□□□□□ -0.35
NIFKP1-201ENST00000398317 IBTKQ9P2D0 1353 aaPredicted RBP12.85□□□□□ -0.35
NIFKP1-201ENST00000398317 HSPA1AP0DMV8 641 aaKnown RBP12.85□□□□□ -0.35
NIFKP1-201ENST00000398317 HSPA1BP0DMV9 641 aaKnown RBP12.85□□□□□ -0.35
NIFKP1-201ENST00000398317 HOXA10P31260 410 aaPredicted RBP12.85□□□□□ -0.35
NIFKP1-201ENST00000398317 AIMP1Q12904 312 aaKnown RBP12.85□□□□□ -0.35
NIFKP1-201ENST00000398317 PPP1R42Q7Z4L9 355 aa12.85□□□□□ -0.35
NIFKP1-201ENST00000398317 OXER1Q8TDS5 423 aa12.85□□□□□ -0.35
NIFKP1-201ENST00000398317 PSMD1Q99460 953 aa12.85□□□□□ -0.35
NIFKP1-201ENST00000398317 HACL1Q9UJ83 578 aa12.85□□□□□ -0.35
NIFKP1-201ENST00000398317 COL4A5P29400 1685 aa12.85□□□□□ -0.35
NIFKP1-201ENST00000398317 RNF123Q5XPI4 1314 aa12.85□□□□□ -0.35
NIFKP1-201ENST00000398317 PPEF1O14829 653 aaPredicted RBP12.84□□□□□ -0.35
NIFKP1-201ENST00000398317 EPHX2P34913 555 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms