RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 LRRC59Q96AG4 307 aaKnown RBP12.96□□□□□ -0.34
CSGALNACT1-202ENST00000397998 MRVI1Q9Y6F6 885 aa12.96□□□□□ -0.34
CSGALNACT1-202ENST00000397998 HMGB1P09429 215 aaKnown RBP12.95□□□□□ -0.34
CSGALNACT1-202ENST00000397998 HOXC9P31274 260 aa12.95□□□□□ -0.34
CSGALNACT1-202ENST00000397998 SYT10Q6XYQ8 523 aa12.95□□□□□ -0.34
CSGALNACT1-202ENST00000397998 TM6SF1Q9BZW5 370 aa12.95□□□□□ -0.34
CSGALNACT1-202ENST00000397998 ZC3H6P61129 1189 aaKnown RBP12.95□□□□□ -0.34
CSGALNACT1-202ENST00000397998 DMTNQ08495 405 aa12.95□□□□□ -0.34
CSGALNACT1-202ENST00000397998 SLC39A6Q13433 755 aa12.95□□□□□ -0.34
CSGALNACT1-202ENST00000397998 TTC39AQ5SRH9 613 aa12.95□□□□□ -0.34
CSGALNACT1-202ENST00000397998 CBFA2T2O43439 604 aa12.95□□□□□ -0.34
CSGALNACT1-202ENST00000397998 KCNQ3O43525 872 aa12.95□□□□□ -0.34
CSGALNACT1-202ENST00000397998 IFIT1P09914 478 aaKnown RBP12.95□□□□□ -0.34
CSGALNACT1-202ENST00000397998 BMS1Q14692 1282 aaKnown RBP12.95□□□□□ -0.34
CSGALNACT1-202ENST00000397998 ELF2Q15723 593 aa12.95□□□□□ -0.34
CSGALNACT1-202ENST00000397998 CCDC158Q5M9N0 1113 aa12.95□□□□□ -0.34
CSGALNACT1-202ENST00000397998 LINS1Q8NG48 757 aa12.95□□□□□ -0.34
CSGALNACT1-202ENST00000397998 NOL10Q9BSC4 688 aaKnown RBP12.95□□□□□ -0.34
CSGALNACT1-202ENST00000397998 SNRKQ9NRH2 765 aa12.95□□□□□ -0.34
CSGALNACT1-202ENST00000397998 UHRF1BP1LA0JNW5 1464 aa12.95□□□□□ -0.34
CSGALNACT1-202ENST00000397998 A0A1B0GVL5 298 aa12.94□□□□□ -0.34
CSGALNACT1-202ENST00000397998 TOP1P11387 765 aaKnown RBP12.94□□□□□ -0.34
CSGALNACT1-202ENST00000397998 SKIDA1Q1XH10 827 aa12.94□□□□□ -0.34
CSGALNACT1-202ENST00000397998 MRPS27Q92552 414 aaKnown RBP12.94□□□□□ -0.34
CSGALNACT1-202ENST00000397998 IFNKQ9P0W0 207 aa12.94□□□□□ -0.34
CSGALNACT1-202ENST00000397998 ORC3Q9UBD5 711 aaPredicted RBP12.94□□□□□ -0.34
CSGALNACT1-202ENST00000397998 A0A0D9SFI3 127 aa12.94□□□□□ -0.34
CSGALNACT1-202ENST00000397998 PTPDC1A2A3K4 754 aa12.94□□□□□ -0.34
CSGALNACT1-202ENST00000397998 ATP2B3Q16720 1220 aa12.94□□□□□ -0.34
CSGALNACT1-202ENST00000397998 HSP90B2PQ58FF3 399 aa12.94□□□□□ -0.34
CSGALNACT1-202ENST00000397998 RRP12Q5JTH9 1297 aaKnown RBP12.94□□□□□ -0.34
CSGALNACT1-202ENST00000397998 ZBTB9Q96C00 473 aa12.94□□□□□ -0.34
CSGALNACT1-202ENST00000397998 IL25Q9H293 177 aa12.94□□□□□ -0.34
CSGALNACT1-202ENST00000397998 ATP10DQ9P241 1426 aa12.94□□□□□ -0.34
CSGALNACT1-202ENST00000397998 ADGRB3O60242 1522 aa12.94□□□□□ -0.34
CSGALNACT1-202ENST00000397998 A0A087WWV3 80 aa12.94□□□□□ -0.34
CSGALNACT1-202ENST00000397998 GOLGA8BA8MQT2 603 aa12.94□□□□□ -0.34
CSGALNACT1-202ENST00000397998 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.94□□□□□ -0.34
CSGALNACT1-202ENST00000397998 PI4K2BQ8TCG2 481 aa12.94□□□□□ -0.34
CSGALNACT1-202ENST00000397998 CEP126Q9P2H0 1117 aa12.94□□□□□ -0.34
CSGALNACT1-202ENST00000397998 IMMTQ16891 758 aaKnown RBP12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 COPS6Q7L5N1 327 aa12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 NCOA5Q9HCD5 579 aaKnown RBP12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 SETBP1Q9Y6X0 1596 aa12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 MCMDC2Q4G0Z9 681 aa12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 TMEM87AQ8NBN3 555 aa12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 GTF3C6Q969F1 213 aa12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 EAF2Q96CJ1 260 aaPredicted RBP12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 ZSWIM4Q9H7M6 989 aa12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 ZNF215Q9UL58 517 aaPredicted RBP12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 PHF8Q9UPP1 1060 aa12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 DHX8Q14562 1220 aaKnown RBP12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 TSR1Q2NL82 804 aaKnown RBP12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 AMOTQ4VCS5 1084 aa12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 XAGE3Q8WTP9 111 aa12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 CACTINQ8WUQ7 758 aaKnown RBP12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 CTNNA3Q9UI47 895 aa12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 PRR36Q9H6K5 1346 aa12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 METP08581 1390 aa12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 CPSF1Q10570 1443 aaKnown RBP12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 MYOM1P52179 1685 aa12.93□□□□□ -0.34
CSGALNACT1-202ENST00000397998 CDK12Q9NYV4 1490 aaPredicted RBP12.92□□□□□ -0.34
CSGALNACT1-202ENST00000397998 SBNO1A3KN83 1393 aa12.92□□□□□ -0.34
CSGALNACT1-202ENST00000397998 MARCKSP29966 332 aaPredicted RBP12.92□□□□□ -0.34
CSGALNACT1-202ENST00000397998 ARHGAP29Q52LW3 1261 aa12.92□□□□□ -0.34
CSGALNACT1-202ENST00000397998 CALCOCO1Q9P1Z2 691 aa12.92□□□□□ -0.34
CSGALNACT1-202ENST00000397998 ATP7BP35670 1465 aa12.92□□□□□ -0.34
CSGALNACT1-202ENST00000397998 YEATS2Q9ULM3 1422 aa12.92□□□□□ -0.34
CSGALNACT1-202ENST00000397998 TATP17735 454 aaPredicted RBP12.92□□□□□ -0.34
CSGALNACT1-202ENST00000397998 NAA30Q147X3 362 aaPredicted RBP12.92□□□□□ -0.34
CSGALNACT1-202ENST00000397998 SUCLG2Q96I99 432 aa12.92□□□□□ -0.34
CSGALNACT1-202ENST00000397998 BEND3Q5T5X7 828 aa12.91□□□□□ -0.34
CSGALNACT1-202ENST00000397998 CCDC150Q8NCX0 1101 aa12.91□□□□□ -0.34
CSGALNACT1-202ENST00000397998 ABCC3O15438 1527 aa12.91□□□□□ -0.34
CSGALNACT1-202ENST00000397998 EIF4A1P60842 406 aaKnown RBP12.91□□□□□ -0.34
CSGALNACT1-202ENST00000397998 OTUD7BQ6GQQ9 843 aa12.91□□□□□ -0.34
CSGALNACT1-202ENST00000397998 THEMISQ8N1K5 641 aaPredicted RBP12.91□□□□□ -0.34
CSGALNACT1-202ENST00000397998 CCDC82Q8N4S0 544 aa12.91□□□□□ -0.34
CSGALNACT1-202ENST00000397998 ZSCAN12O43309 604 aa12.91□□□□□ -0.34
CSGALNACT1-202ENST00000397998 UBASH3AP57075 661 aa12.91□□□□□ -0.34
CSGALNACT1-202ENST00000397998 GNG11P61952 73 aa12.91□□□□□ -0.34
CSGALNACT1-202ENST00000397998 TFCP2Q12800 502 aa12.91□□□□□ -0.34
CSGALNACT1-202ENST00000397998 ERO1AQ96HE7 468 aa12.91□□□□□ -0.34
CSGALNACT1-202ENST00000397998 ANKRD13DQ6ZTN6 518 aa12.9□□□□□ -0.34
CSGALNACT1-202ENST00000397998 TTC14Q96N46 770 aa12.9□□□□□ -0.34
CSGALNACT1-202ENST00000397998 ERICH2A1L162 156 aa12.9□□□□□ -0.34
CSGALNACT1-202ENST00000397998 CABP4P57796 275 aa12.9□□□□□ -0.34
CSGALNACT1-202ENST00000397998 FAM160A1Q05DH4 1040 aa12.9□□□□□ -0.34
CSGALNACT1-202ENST00000397998 CCDC57Q2TAC2 916 aa12.9□□□□□ -0.34
CSGALNACT1-202ENST00000397998 DHX32Q7L7V1 743 aaKnown RBP12.9□□□□□ -0.34
CSGALNACT1-202ENST00000397998 PPFIBP1Q86W92 1011 aa12.9□□□□□ -0.34
CSGALNACT1-202ENST00000397998 CCDC144CPQ8IYA2 1237 aa12.9□□□□□ -0.34
CSGALNACT1-202ENST00000397998 KCNH5Q8NCM2 988 aa12.9□□□□□ -0.34
CSGALNACT1-202ENST00000397998 AK7Q96M32 723 aa12.9□□□□□ -0.34
CSGALNACT1-202ENST00000397998 TIGD1Q96MW7 591 aa12.9□□□□□ -0.34
CSGALNACT1-202ENST00000397998 CWC15Q9P013 229 aaKnown RBP12.9□□□□□ -0.34
CSGALNACT1-202ENST00000397998 KLF18A0A0U1RQI7 1052 aa12.9□□□□□ -0.34
CSGALNACT1-202ENST00000397998 KLHL10Q6JEL2 608 aa12.9□□□□□ -0.34
CSGALNACT1-202ENST00000397998 ANKRD20A12PQ8NF67 263 aa12.9□□□□□ -0.34
CSGALNACT1-202ENST00000397998 CPLX3Q8WVH0 158 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms