RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 ARFGEF2Q9Y6D5 1785 aa21.95■■□□□ 1.1
CHRFAM7A-202ENST00000397827 CASP7P55210 303 aa21.94■■□□□ 1.1
CHRFAM7A-202ENST00000397827 ZCRB1Q8TBF4 217 aaKnown RBP21.94■■□□□ 1.1
CHRFAM7A-202ENST00000397827 DBNDD2Q9BQY9 259 aa21.94■■□□□ 1.1
CHRFAM7A-202ENST00000397827 RNF214Q8ND24 703 aa21.94■■□□□ 1.1
CHRFAM7A-202ENST00000397827 SNRKQ9NRH2 765 aa21.94■■□□□ 1.1
CHRFAM7A-202ENST00000397827 TPCN1Q9ULQ1 816 aa21.94■■□□□ 1.1
CHRFAM7A-202ENST00000397827 A1BGP04217 495 aa21.93■■□□□ 1.1
CHRFAM7A-202ENST00000397827 DNAJC2Q99543 621 aaKnown RBP21.93■■□□□ 1.1
CHRFAM7A-202ENST00000397827 MED23Q9ULK4 1368 aa21.93■■□□□ 1.1
CHRFAM7A-202ENST00000397827 F13A1P00488 732 aa21.93■■□□□ 1.1
CHRFAM7A-202ENST00000397827 ATP5JP18859 108 aa21.93■■□□□ 1.1
CHRFAM7A-202ENST00000397827 GLI3P10071 1580 aa21.93■■□□□ 1.1
CHRFAM7A-202ENST00000397827 WDR17Q8IZU2 1322 aa21.92■■□□□ 1.1
CHRFAM7A-202ENST00000397827 ZSCAN31Q96LW9 406 aaPredicted RBP21.92■■□□□ 1.1
CHRFAM7A-202ENST00000397827 SH2B1Q9NRF2 756 aaPredicted RBP21.92■■□□□ 1.1
CHRFAM7A-202ENST00000397827 PCDH11XQ9BZA7 1347 aa21.92■■□□□ 1.1
CHRFAM7A-202ENST00000397827 PCDH11YQ9BZA8 1340 aa21.92■■□□□ 1.1
CHRFAM7A-202ENST00000397827 ZBTB3Q9H5J0 574 aa21.91■■□□□ 1.1
CHRFAM7A-202ENST00000397827 FIBPO43427 364 aa21.9■■□□□ 1.1
CHRFAM7A-202ENST00000397827 TAF5LO75529 589 aa21.9■■□□□ 1.1
CHRFAM7A-202ENST00000397827 PSMA5P28066 241 aa21.9■■□□□ 1.1
CHRFAM7A-202ENST00000397827 FOXO4P98177 505 aa21.9■■□□□ 1.1
CHRFAM7A-202ENST00000397827 RNF20Q5VTR2 975 aa21.9■■□□□ 1.1
CHRFAM7A-202ENST00000397827 BLOC1S2Q6QNY1 142 aa21.9■■□□□ 1.1
CHRFAM7A-202ENST00000397827 SEC62Q99442 399 aaKnown RBP21.9■■□□□ 1.1
CHRFAM7A-202ENST00000397827 COL15A1P39059 1388 aa21.9■■□□□ 1.1
CHRFAM7A-202ENST00000397827 PLEKHG2Q9H7P9 1386 aa21.9■■□□□ 1.1
CHRFAM7A-202ENST00000397827 CCDC129Q6ZRS4 1044 aa21.9■■□□□ 1.1
CHRFAM7A-202ENST00000397827 MTMR6Q9Y217 621 aa21.9■■□□□ 1.1
CHRFAM7A-202ENST00000397827 DDX46Q7L014 1031 aaKnown RBP21.89■■□□□ 1.1
CHRFAM7A-202ENST00000397827 SYAP1Q96A49 352 aaPredicted RBP21.89■■□□□ 1.1
CHRFAM7A-202ENST00000397827 VPS37CA5D8V6 355 aaPredicted RBP21.89■■□□□ 1.09
CHRFAM7A-202ENST00000397827 H7C1W4 665 aa21.88■■□□□ 1.09
CHRFAM7A-202ENST00000397827 TMEM87AQ8NBN3 555 aa21.88■■□□□ 1.09
CHRFAM7A-202ENST00000397827 STRN4Q9NRL3 753 aa21.88■■□□□ 1.09
CHRFAM7A-202ENST00000397827 DNM1Q05193 864 aaKnown RBP21.88■■□□□ 1.09
CHRFAM7A-202ENST00000397827 NEUROD6Q96NK8 337 aa21.87■■□□□ 1.09
CHRFAM7A-202ENST00000397827 CWC25Q9NXE8 425 aaPredicted RBP21.87■■□□□ 1.09
CHRFAM7A-202ENST00000397827 LAMB4A4D0S4 1761 aa21.87■■□□□ 1.09
CHRFAM7A-202ENST00000397827 RPS6KB1P23443 525 aa21.87■■□□□ 1.09
CHRFAM7A-202ENST00000397827 TSPY26PQ9H489 355 aa21.87■■□□□ 1.09
CHRFAM7A-202ENST00000397827 PDLIM2Q96JY6 352 aa21.87■■□□□ 1.09
CHRFAM7A-202ENST00000397827 ERVV-2B6SEH9 535 aa21.86■■□□□ 1.09
CHRFAM7A-202ENST00000397827 TIMM10P62072 90 aa21.86■■□□□ 1.09
CHRFAM7A-202ENST00000397827 ATP6V1DQ9Y5K8 247 aa21.86■■□□□ 1.09
CHRFAM7A-202ENST00000397827 XIRP1Q702N8 1843 aaKnown RBP21.86■■□□□ 1.09
CHRFAM7A-202ENST00000397827 ZNF609O15014 1411 aa21.86■■□□□ 1.09
CHRFAM7A-202ENST00000397827 IL2RBP14784 551 aa21.86■■□□□ 1.09
CHRFAM7A-202ENST00000397827 STK3Q13188 491 aa21.86■■□□□ 1.09
CHRFAM7A-202ENST00000397827 TOB2Q14106 344 aaPredicted RBP21.86■■□□□ 1.09
CHRFAM7A-202ENST00000397827 SLFNL1Q499Z3 407 aa21.86■■□□□ 1.09
CHRFAM7A-202ENST00000397827 ATG9AQ7Z3C6 839 aa21.86■■□□□ 1.09
CHRFAM7A-202ENST00000397827 ZNF594Q96JF6 807 aaPredicted RBP21.86■■□□□ 1.09
CHRFAM7A-202ENST00000397827 HAUS7Q99871 368 aa21.86■■□□□ 1.09
CHRFAM7A-202ENST00000397827 ZNF330Q9Y3S2 320 aaPredicted RBP21.85■■□□□ 1.09
CHRFAM7A-202ENST00000397827 JCADQ9P266 1359 aa21.85■■□□□ 1.09
CHRFAM7A-202ENST00000397827 COL5A2P05997 1499 aaPredicted RBP21.85■■□□□ 1.09
CHRFAM7A-202ENST00000397827 PARP4Q9UKK3 1724 aaKnown RBP21.85■■□□□ 1.09
CHRFAM7A-202ENST00000397827 LARP1BQ659C4 914 aaKnown RBP21.85■■□□□ 1.09
CHRFAM7A-202ENST00000397827 ZSCAN30Q86W11 494 aa21.85■■□□□ 1.09
CHRFAM7A-202ENST00000397827 UBE2HP62256 183 aa21.84■■□□□ 1.09
CHRFAM7A-202ENST00000397827 FERMT3Q86UX7 667 aa21.84■■□□□ 1.09
CHRFAM7A-202ENST00000397827 HMG20BQ9P0W2 317 aa21.84■■□□□ 1.09
CHRFAM7A-202ENST00000397827 LRRC24Q50LG9 513 aa21.83■■□□□ 1.09
CHRFAM7A-202ENST00000397827 USPL1Q5W0Q7 1092 aa21.83■■□□□ 1.09
CHRFAM7A-202ENST00000397827 FAM13BQ9NYF5 915 aa21.83■■□□□ 1.09
CHRFAM7A-202ENST00000397827 SLAIN2Q9P270 581 aa21.83■■□□□ 1.09
CHRFAM7A-202ENST00000397827 PHF14O94880 888 aa21.82■■□□□ 1.08
CHRFAM7A-202ENST00000397827 KCPQ6ZWJ8 1503 aa21.82■■□□□ 1.08
CHRFAM7A-202ENST00000397827 GOLIM4O00461 696 aa21.82■■□□□ 1.08
CHRFAM7A-202ENST00000397827 ANKRD1Q15327 319 aa21.82■■□□□ 1.08
CHRFAM7A-202ENST00000397827 MCMDC2Q4G0Z9 681 aa21.82■■□□□ 1.08
CHRFAM7A-202ENST00000397827 CDC37L1Q7L3B6 337 aa21.82■■□□□ 1.08
CHRFAM7A-202ENST00000397827 SOS2Q07890 1332 aaPredicted RBP21.82■■□□□ 1.08
CHRFAM7A-202ENST00000397827 NKX1-1Q15270 411 aaPredicted RBP21.82■■□□□ 1.08
CHRFAM7A-202ENST00000397827 TSGA10IPQ3SY00 556 aa21.82■■□□□ 1.08
CHRFAM7A-202ENST00000397827 FAM173BQ6P4H8 233 aa21.82■■□□□ 1.08
CHRFAM7A-202ENST00000397827 CCDC183Q5T5S1 534 aa21.81■■□□□ 1.08
CHRFAM7A-202ENST00000397827 KBTBD3Q8NAB2 608 aa21.81■■□□□ 1.08
CHRFAM7A-202ENST00000397827 CARD10Q9BWT7 1032 aa21.81■■□□□ 1.08
CHRFAM7A-202ENST00000397827 CYP21A2P08686 494 aa21.81■■□□□ 1.08
CHRFAM7A-202ENST00000397827 EVA1CP58658 441 aa21.81■■□□□ 1.08
CHRFAM7A-202ENST00000397827 CCDC191Q8NCU4 936 aa21.81■■□□□ 1.08
CHRFAM7A-202ENST00000397827 NEK1Q96PY6 1258 aa21.81■■□□□ 1.08
CHRFAM7A-202ENST00000397827 ZHX1Q9UKY1 873 aaPredicted RBP21.81■■□□□ 1.08
CHRFAM7A-202ENST00000397827 MSNP26038 577 aaKnown RBP21.8■■□□□ 1.08
CHRFAM7A-202ENST00000397827 PUS3Q9BZE2 481 aaKnown RBP21.8■■□□□ 1.08
CHRFAM7A-202ENST00000397827 UBR2Q8IWV8 1755 aa21.8■■□□□ 1.08
CHRFAM7A-202ENST00000397827 NUP188Q5SRE5 1749 aa21.79■■□□□ 1.08
CHRFAM7A-202ENST00000397827 ARID3AQ99856 593 aa21.79■■□□□ 1.08
CHRFAM7A-202ENST00000397827 PAG1Q9NWQ8 432 aa21.79■■□□□ 1.08
CHRFAM7A-202ENST00000397827 IL15P40933 162 aaPredicted RBP21.79■■□□□ 1.08
CHRFAM7A-202ENST00000397827 LRRC2Q9BYS8 371 aa21.79■■□□□ 1.08
CHRFAM7A-202ENST00000397827 ZNF335Q9H4Z2 1342 aaPredicted RBP21.78■■□□□ 1.08
CHRFAM7A-202ENST00000397827 CCDC85AQ96PX6 553 aaPredicted RBP21.78■■□□□ 1.08
CHRFAM7A-202ENST00000397827 ALDH8A1Q9H2A2 487 aaPredicted RBP21.78■■□□□ 1.08
CHRFAM7A-202ENST00000397827 U3KPZ7 1027 aaPredicted RBP21.78■■□□□ 1.08
CHRFAM7A-202ENST00000397827 TJP1Q07157 1748 aa21.78■■□□□ 1.08
CHRFAM7A-202ENST00000397827 EYA2O00167 538 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms