RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 LMTK3Q96Q04 1460 aa10.8□□□□□ -0.68
CAPN3-206ENST00000397163 LTKP29376 864 aa10.8□□□□□ -0.68
CAPN3-206ENST00000397163 NLRP6P59044 892 aa10.8□□□□□ -0.68
CAPN3-206ENST00000397163 COL9A3Q14050 684 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-206ENST00000397163 SYCP1Q15431 976 aa10.8□□□□□ -0.68
CAPN3-206ENST00000397163 NUTM2GQ5VZR2 741 aa10.8□□□□□ -0.68
CAPN3-206ENST00000397163 KRT222Q8N1A0 295 aa10.8□□□□□ -0.68
CAPN3-206ENST00000397163 MAP4K1Q92918 833 aa10.8□□□□□ -0.68
CAPN3-206ENST00000397163 GTF3C6Q969F1 213 aa10.8□□□□□ -0.68
CAPN3-206ENST00000397163 IRX3P78415 501 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-206ENST00000397163 CCDC144BQ3MJ40 725 aa10.79□□□□□ -0.68
CAPN3-206ENST00000397163 CEP135Q66GS9 1140 aa10.79□□□□□ -0.68
CAPN3-206ENST00000397163 ERC1Q8IUD2 1116 aa10.79□□□□□ -0.68
CAPN3-206ENST00000397163 CCDC144CPQ8IYA2 1237 aa10.79□□□□□ -0.68
CAPN3-206ENST00000397163 USHBP1Q8N6Y0 703 aa10.79□□□□□ -0.68
CAPN3-206ENST00000397163 HIP1O00291 1037 aa10.79□□□□□ -0.68
CAPN3-206ENST00000397163 FSD1Q9BTV5 496 aa10.79□□□□□ -0.68
CAPN3-206ENST00000397163 FAM208AQ9UK61 1670 aaKnown RBP10.79□□□□□ -0.68
CAPN3-206ENST00000397163 ELF2Q15723 593 aa10.79□□□□□ -0.68
CAPN3-206ENST00000397163 PGBD1Q96JS3 809 aa10.79□□□□□ -0.68
CAPN3-206ENST00000397163 CCDC8Q9H0W5 538 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-206ENST00000397163 MORC2Q9Y6X9 1032 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-206ENST00000397163 H3BQV1 296 aa10.78□□□□□ -0.68
CAPN3-206ENST00000397163 RPS6KB1P23443 525 aa10.78□□□□□ -0.68
CAPN3-206ENST00000397163 IFFO2Q5TF58 517 aa10.78□□□□□ -0.68
CAPN3-206ENST00000397163 RBM43Q6ZSC3 357 aaKnown RBP10.78□□□□□ -0.68
CAPN3-206ENST00000397163 HOXC9P31274 260 aa10.78□□□□□ -0.68
CAPN3-206ENST00000397163 CEBPZQ03701 1054 aaKnown RBP10.78□□□□□ -0.68
CAPN3-206ENST00000397163 BOLA2Q9H3K6 86 aa10.78□□□□□ -0.68
CAPN3-206ENST00000397163 ZNF215Q9UL58 517 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-206ENST00000397163 JAK2O60674 1132 aa10.77□□□□□ -0.68
CAPN3-206ENST00000397163 EIF4A1P60842 406 aaKnown RBP10.77□□□□□ -0.68
CAPN3-206ENST00000397163 FBXO38Q6PIJ6 1188 aa10.77□□□□□ -0.68
CAPN3-206ENST00000397163 TAF6LQ9Y6J9 622 aa10.77□□□□□ -0.68
CAPN3-206ENST00000397163 PLEKHG1Q9ULL1 1385 aa10.77□□□□□ -0.69
CAPN3-206ENST00000397163 A0A0D9SFI3 127 aa10.77□□□□□ -0.69
CAPN3-206ENST00000397163 BECN2A8MW95 431 aa10.77□□□□□ -0.69
CAPN3-206ENST00000397163 HNRNPH2P55795 449 aaKnown RBP10.77□□□□□ -0.69
CAPN3-206ENST00000397163 G3BP1Q13283 466 aaKnown RBP eCLIP10.77□□□□□ -0.69
CAPN3-206ENST00000397163 ARID5BQ14865 1188 aa10.77□□□□□ -0.69
CAPN3-206ENST00000397163 PTPN14Q15678 1187 aa10.77□□□□□ -0.69
CAPN3-206ENST00000397163 FILIP1Q7Z7B0 1213 aa10.77□□□□□ -0.69
CAPN3-206ENST00000397163 LRRC8AQ8IWT6 810 aa10.77□□□□□ -0.69
CAPN3-206ENST00000397163 SYTL4Q96C24 671 aaPredicted RBP10.77□□□□□ -0.69
CAPN3-206ENST00000397163 DDX11Q96FC9 970 aa10.77□□□□□ -0.69
CAPN3-206ENST00000397163 USP27XA6NNY8 438 aa10.77□□□□□ -0.69
CAPN3-206ENST00000397163 KCNQ3O43525 872 aa10.77□□□□□ -0.69
CAPN3-206ENST00000397163 CAVIN2O95810 425 aa10.77□□□□□ -0.69
CAPN3-206ENST00000397163 HSP90B1P14625 803 aaKnown RBP10.77□□□□□ -0.69
CAPN3-206ENST00000397163 MTX1Q13505 466 aa10.77□□□□□ -0.69
CAPN3-206ENST00000397163 TOB2Q14106 344 aaPredicted RBP10.77□□□□□ -0.69
CAPN3-206ENST00000397163 BRF1Q92994 677 aa10.77□□□□□ -0.69
CAPN3-206ENST00000397163 SKILP12757 684 aa10.76□□□□□ -0.69
CAPN3-206ENST00000397163 SLC26A8Q96RN1 970 aa10.76□□□□□ -0.69
CAPN3-206ENST00000397163 TRMT1Q9NXH9 659 aaKnown RBP10.76□□□□□ -0.69
CAPN3-206ENST00000397163 CALCOCO1Q9P1Z2 691 aa10.76□□□□□ -0.69
CAPN3-206ENST00000397163 MAP3K2Q9Y2U5 619 aa10.76□□□□□ -0.69
CAPN3-206ENST00000397163 CDC25BP30305 580 aa10.76□□□□□ -0.69
CAPN3-206ENST00000397163 RBM6P78332 1123 aaKnown RBP10.76□□□□□ -0.69
CAPN3-206ENST00000397163 NEK11Q8NG66 645 aa10.76□□□□□ -0.69
CAPN3-206ENST00000397163 EAF2Q96CJ1 260 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-206ENST00000397163 LGR6Q9HBX8 967 aa10.76□□□□□ -0.69
CAPN3-206ENST00000397163 NEMFO60524 1076 aa10.75□□□□□ -0.69
CAPN3-206ENST00000397163 TNNT3P45378 269 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-206ENST00000397163 CFAP45Q9UL16 551 aa10.75□□□□□ -0.69
CAPN3-206ENST00000397163 HDAC5Q9UQL6 1122 aa10.75□□□□□ -0.69
CAPN3-206ENST00000397163 USP16Q9Y5T5 823 aa10.75□□□□□ -0.69
CAPN3-206ENST00000397163 FOSBP53539 338 aa10.75□□□□□ -0.69
CAPN3-206ENST00000397163 TEFQ10587 303 aa10.75□□□□□ -0.69
CAPN3-206ENST00000397163 RESTQ13127 1097 aa10.75□□□□□ -0.69
CAPN3-206ENST00000397163 CWF19L2Q2TBE0 894 aaKnown RBP10.75□□□□□ -0.69
CAPN3-206ENST00000397163 C11orf57Q6ZUT1 292 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-206ENST00000397163 C14orf37Q86TY3 774 aa10.75□□□□□ -0.69
CAPN3-206ENST00000397163 ZNF397Q8NF99 534 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-206ENST00000397163 SIL1Q9H173 461 aa10.75□□□□□ -0.69
CAPN3-206ENST00000397163 NPHP4O75161 1426 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-206ENST00000397163 CCDC69A6NI79 296 aa10.75□□□□□ -0.69
CAPN3-206ENST00000397163 POLR3GO15318 223 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-206ENST00000397163 HOXB7P09629 217 aa10.75□□□□□ -0.69
CAPN3-206ENST00000397163 RAD51AP2Q09MP3 1159 aa10.75□□□□□ -0.69
CAPN3-206ENST00000397163 STX1AQ16623 288 aa10.75□□□□□ -0.69
CAPN3-206ENST00000397163 TLR7Q9NYK1 1049 aaKnown RBP10.75□□□□□ -0.69
CAPN3-206ENST00000397163 HMG20BQ9P0W2 317 aa10.75□□□□□ -0.69
CAPN3-206ENST00000397163 FEZ2Q9UHY8 353 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-206ENST00000397163 ADCY9O60503 1353 aa10.74□□□□□ -0.69
CAPN3-206ENST00000397163 NALCNQ8IZF0 1738 aa10.74□□□□□ -0.69
CAPN3-206ENST00000397163 IQCB1Q15051 598 aa10.74□□□□□ -0.69
CAPN3-206ENST00000397163 ZNF589Q86UQ0 364 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-206ENST00000397163 MRFAP1L1Q96HT8 127 aa10.74□□□□□ -0.69
CAPN3-206ENST00000397163 NOL10Q9BSC4 688 aaKnown RBP10.74□□□□□ -0.69
CAPN3-206ENST00000397163 TBX22Q9Y458 520 aa10.74□□□□□ -0.69
CAPN3-206ENST00000397163 BTBD11A6QL63 1104 aa10.74□□□□□ -0.69
CAPN3-206ENST00000397163 TULP2O00295 520 aa10.74□□□□□ -0.69
CAPN3-206ENST00000397163 ALDH1L1O75891 902 aa10.74□□□□□ -0.69
CAPN3-206ENST00000397163 SASH1O94885 1247 aa10.74□□□□□ -0.69
CAPN3-206ENST00000397163 SARM1Q6SZW1 724 aa10.74□□□□□ -0.69
CAPN3-206ENST00000397163 CCDC73Q6ZRK6 1079 aa10.74□□□□□ -0.69
CAPN3-206ENST00000397163 CCAR1Q8IX12 1150 aaKnown RBP10.74□□□□□ -0.69
CAPN3-206ENST00000397163 FBXW7Q969H0 707 aa10.74□□□□□ -0.69
CAPN3-206ENST00000397163 DBF4Q9UBU7 674 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms