RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 SYNE3Q6ZMZ3 975 aa18.1■□□□□ 0.49
MCF2L-205ENST00000397017 CHAMP1Q96JM3 812 aa18.1■□□□□ 0.49
MCF2L-205ENST00000397017 SASH1O94885 1247 aa18.09■□□□□ 0.49
MCF2L-205ENST00000397017 SAMD1Q6SPF0 538 aaPredicted RBP18.09■□□□□ 0.49
MCF2L-205ENST00000397017 BICD2Q8TD16 824 aa18.09■□□□□ 0.49
MCF2L-205ENST00000397017 NRKQ7Z2Y5 1582 aa18.09■□□□□ 0.49
MCF2L-205ENST00000397017 SLC9C2Q5TAH2 1124 aa18.09■□□□□ 0.49
MCF2L-205ENST00000397017 SMARCC1Q92922 1105 aaPredicted RBP18.09■□□□□ 0.49
MCF2L-205ENST00000397017 NRXN3Q9Y4C0 1643 aa18.09■□□□□ 0.49
MCF2L-205ENST00000397017 CRKLP46109 303 aaKnown RBP18.08■□□□□ 0.49
MCF2L-205ENST00000397017 CCDC144CPQ8IYA2 1237 aa18.08■□□□□ 0.49
MCF2L-205ENST00000397017 MPNDQ8N594 471 aa18.08■□□□□ 0.49
MCF2L-205ENST00000397017 GREM2Q9H772 168 aa18.08■□□□□ 0.49
MCF2L-205ENST00000397017 RTCBQ9Y3I0 505 aaKnown RBP18.08■□□□□ 0.49
MCF2L-205ENST00000397017 GNL3LQ9NVN8 582 aaKnown RBP18.08■□□□□ 0.48
MCF2L-205ENST00000397017 PXDNQ92626 1479 aa18.08■□□□□ 0.48
MCF2L-205ENST00000397017 SOS2Q07890 1332 aaPredicted RBP18.08■□□□□ 0.48
MCF2L-205ENST00000397017 SLC5A1P13866 664 aa18.08■□□□□ 0.48
MCF2L-205ENST00000397017 RBM25P49756 843 aaKnown RBP18.08■□□□□ 0.48
MCF2L-205ENST00000397017 TTC41PQ6P2S7 1318 aa18.08■□□□□ 0.48
MCF2L-205ENST00000397017 SH3TC1Q8TE82 1336 aa18.08■□□□□ 0.48
MCF2L-205ENST00000397017 CCDC152Q4G0S7 254 aa18.07■□□□□ 0.48
MCF2L-205ENST00000397017 NUP133Q8WUM0 1156 aa18.07■□□□□ 0.48
MCF2L-205ENST00000397017 BCL11BQ9C0K0 894 aaPredicted RBP18.07■□□□□ 0.48
MCF2L-205ENST00000397017 DBNLQ9UJU6 430 aaKnown RBP18.07■□□□□ 0.48
MCF2L-205ENST00000397017 KIF20BQ96Q89 1820 aa18.07■□□□□ 0.48
MCF2L-205ENST00000397017 PI16Q6UXB8 463 aa18.07■□□□□ 0.48
MCF2L-205ENST00000397017 NOL10Q9BSC4 688 aaKnown RBP18.07■□□□□ 0.48
MCF2L-205ENST00000397017 PTH1RQ03431 593 aa18.07■□□□□ 0.48
MCF2L-205ENST00000397017 MIGA1Q8NAN2 632 aa18.07■□□□□ 0.48
MCF2L-205ENST00000397017 ATP6V1DQ9Y5K8 247 aa18.07■□□□□ 0.48
MCF2L-205ENST00000397017 BRF1Q92994 677 aa18.06■□□□□ 0.48
MCF2L-205ENST00000397017 XAGE2Q96GT9 111 aa18.06■□□□□ 0.48
MCF2L-205ENST00000397017 LIMCH1Q9UPQ0 1083 aa18.06■□□□□ 0.48
MCF2L-205ENST00000397017 SGSM2O43147 1006 aa18.06■□□□□ 0.48
MCF2L-205ENST00000397017 ADORA1P30542 326 aa18.06■□□□□ 0.48
MCF2L-205ENST00000397017 A0A0D9SFI3 127 aa18.05■□□□□ 0.48
MCF2L-205ENST00000397017 AK2P54819 239 aa18.05■□□□□ 0.48
MCF2L-205ENST00000397017 CPLX2Q6PUV4 134 aaKnown RBP18.05■□□□□ 0.48
MCF2L-205ENST00000397017 KIF3AQ9Y496 699 aa18.05■□□□□ 0.48
MCF2L-205ENST00000397017 ERICH2A1L162 156 aa18.05■□□□□ 0.48
MCF2L-205ENST00000397017 SYAP1Q96A49 352 aaPredicted RBP18.05■□□□□ 0.48
MCF2L-205ENST00000397017 NLRP3Q96P20 1036 aa18.05■□□□□ 0.48
MCF2L-205ENST00000397017 CEMIPQ8WUJ3 1361 aa18.05■□□□□ 0.48
MCF2L-205ENST00000397017 AKAP17AQ02040 695 aaKnown RBP18.05■□□□□ 0.48
MCF2L-205ENST00000397017 PTPN12Q05209 780 aaKnown RBP18.05■□□□□ 0.48
MCF2L-205ENST00000397017 CAVIN4Q5BKX8 364 aa18.05■□□□□ 0.48
MCF2L-205ENST00000397017 ANKRD18AQ8IVF6 992 aa18.05■□□□□ 0.48
MCF2L-205ENST00000397017 MEGF6O75095 1541 aa18.05■□□□□ 0.48
MCF2L-205ENST00000397017 C6orf229H3BNL8 230 aa18.04■□□□□ 0.48
MCF2L-205ENST00000397017 IMMTQ16891 758 aaKnown RBP18.04■□□□□ 0.48
MCF2L-205ENST00000397017 CDC5LQ99459 802 aaKnown RBP18.04■□□□□ 0.48
MCF2L-205ENST00000397017 SEC31BQ9NQW1 1179 aa18.04■□□□□ 0.48
MCF2L-205ENST00000397017 SHPRHQ149N8 1683 aa18.04■□□□□ 0.48
MCF2L-205ENST00000397017 DHX16O60231 1041 aaKnown RBP18.04■□□□□ 0.48
MCF2L-205ENST00000397017 PDIA6Q15084 440 aa18.04■□□□□ 0.48
MCF2L-205ENST00000397017 NAPBQ9H115 298 aa18.04■□□□□ 0.48
MCF2L-205ENST00000397017 CWC22Q9HCG8 908 aaKnown RBP18.04■□□□□ 0.48
MCF2L-205ENST00000397017 CHGBP05060 677 aa18.04■□□□□ 0.48
MCF2L-205ENST00000397017 CREB3L3Q68CJ9 461 aa18.04■□□□□ 0.48
MCF2L-205ENST00000397017 MCMDC2Q4G0Z9 681 aa18.04■□□□□ 0.48
MCF2L-205ENST00000397017 DRC7Q8IY82 874 aa18.04■□□□□ 0.48
MCF2L-205ENST00000397017 TFIP11Q9UBB9 837 aaKnown RBP18.04■□□□□ 0.48
MCF2L-205ENST00000397017 U3KPZ7 1027 aaPredicted RBP18.04■□□□□ 0.48
MCF2L-205ENST00000397017 MAP3K12Q12852 859 aa18.03■□□□□ 0.48
MCF2L-205ENST00000397017 SKOR2Q2VWA4 1001 aaPredicted RBP18.03■□□□□ 0.48
MCF2L-205ENST00000397017 DNTTIP2Q5QJE6 756 aaKnown RBP18.03■□□□□ 0.48
MCF2L-205ENST00000397017 GIGYF2Q6Y7W6 1299 aaKnown RBP18.03■□□□□ 0.48
MCF2L-205ENST00000397017 NEK1Q96PY6 1258 aa18.03■□□□□ 0.48
MCF2L-205ENST00000397017 CDCA7Q9BWT1 371 aaPredicted RBP18.03■□□□□ 0.48
MCF2L-205ENST00000397017 ZAP70P43403 619 aa18.03■□□□□ 0.48
MCF2L-205ENST00000397017 TFCP2L1Q9NZI6 479 aa18.03■□□□□ 0.48
MCF2L-205ENST00000397017 ZNF213O14771 459 aa18.03■□□□□ 0.48
MCF2L-205ENST00000397017 MAP3K15Q6ZN16 1313 aa18.02■□□□□ 0.48
MCF2L-205ENST00000397017 RPGRQ92834 1020 aaKnown RBP18.02■□□□□ 0.48
MCF2L-205ENST00000397017 ANTXR1Q9H6X2 564 aa18.02■□□□□ 0.48
MCF2L-205ENST00000397017 NSFL1CQ9UNZ2 370 aaKnown RBP18.02■□□□□ 0.48
MCF2L-205ENST00000397017 PKP1Q13835 747 aa18.02■□□□□ 0.48
MCF2L-205ENST00000397017 RASEFQ8IZ41 740 aa18.02■□□□□ 0.48
MCF2L-205ENST00000397017 SRP68Q9UHB9 627 aaKnown RBP18.02■□□□□ 0.48
MCF2L-205ENST00000397017 CCDC171Q6TFL3 1326 aa18.02■□□□□ 0.47
MCF2L-205ENST00000397017 USP32Q8NFA0 1604 aa18.02■□□□□ 0.47
MCF2L-205ENST00000397017 PDE8AO60658 829 aa18.01■□□□□ 0.47
MCF2L-205ENST00000397017 PTMSP20962 102 aa18.01■□□□□ 0.47
MCF2L-205ENST00000397017 GJB2P29033 226 aa18.01■□□□□ 0.47
MCF2L-205ENST00000397017 POLA2Q14181 598 aa18.01■□□□□ 0.47
MCF2L-205ENST00000397017 USPL1Q5W0Q7 1092 aa18.01■□□□□ 0.47
MCF2L-205ENST00000397017 SNX14Q9Y5W7 946 aa18.01■□□□□ 0.47
MCF2L-205ENST00000397017 ZSCAN25Q6NSZ9 544 aa18.01■□□□□ 0.47
MCF2L-205ENST00000397017 QTRT2Q9H974 415 aaKnown RBP18.01■□□□□ 0.47
MCF2L-205ENST00000397017 NACAP1Q9BZK3 213 aa18.01■□□□□ 0.47
MCF2L-205ENST00000397017 WDR33Q9C0J8 1336 aaKnown RBP18■□□□□ 0.47
MCF2L-205ENST00000397017 BAG4O95429 457 aaKnown RBP18■□□□□ 0.47
MCF2L-205ENST00000397017 ZBTB38Q8NAP3 1195 aaPredicted RBP18■□□□□ 0.47
MCF2L-205ENST00000397017 CIZ1Q9ULV3 898 aaPredicted RBP18■□□□□ 0.47
MCF2L-205ENST00000397017 RGPD8O14715 1765 aaPredicted RBP18■□□□□ 0.47
MCF2L-205ENST00000397017 TRIM37O94972 964 aa18■□□□□ 0.47
MCF2L-205ENST00000397017 RXRAP19793 462 aa18■□□□□ 0.47
MCF2L-205ENST00000397017 TRIM29Q14134 588 aa18■□□□□ 0.47
MCF2L-205ENST00000397017 RBM27Q9P2N5 1060 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms