RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 GRAPLQ8TC17 118 aaPredicted RBP22.91■■□□□ 1.26
EXOSC3-202ENST00000396521 ABHD8Q96I13 439 aa22.91■■□□□ 1.26
EXOSC3-202ENST00000396521 BCL2L13Q9BXK5 485 aa22.91■■□□□ 1.26
EXOSC3-202ENST00000396521 TRAF5O00463 557 aa22.9■■□□□ 1.26
EXOSC3-202ENST00000396521 TMPOP42166 694 aaKnown RBP22.9■■□□□ 1.26
EXOSC3-202ENST00000396521 GMPSP49915 693 aaPredicted RBP22.9■■□□□ 1.26
EXOSC3-202ENST00000396521 CYP4F22Q6NT55 531 aa22.9■■□□□ 1.26
EXOSC3-202ENST00000396521 SAPCD2Q86UD0 394 aa22.9■■□□□ 1.26
EXOSC3-202ENST00000396521 LTBP1Q14766 1721 aa22.89■■□□□ 1.26
EXOSC3-202ENST00000396521 PROSER3Q2NL68 480 aa22.89■■□□□ 1.25
EXOSC3-202ENST00000396521 CDC37L1Q7L3B6 337 aa22.89■■□□□ 1.25
EXOSC3-202ENST00000396521 XAGE3Q8WTP9 111 aa22.89■■□□□ 1.25
EXOSC3-202ENST00000396521 H7C1D1 291 aa22.88■■□□□ 1.25
EXOSC3-202ENST00000396521 CELF2O95319 508 aaKnown RBP22.88■■□□□ 1.25
EXOSC3-202ENST00000396521 HCLS1P14317 486 aaPredicted RBP22.88■■□□□ 1.25
EXOSC3-202ENST00000396521 AIMP1Q12904 312 aaKnown RBP22.88■■□□□ 1.25
EXOSC3-202ENST00000396521 HOXB7P09629 217 aa22.87■■□□□ 1.25
EXOSC3-202ENST00000396521 FMR1Q06787 632 aaKnown RBP eCLIP22.87■■□□□ 1.254e-6■■■■□ 21.6
EXOSC3-202ENST00000396521 DPF2Q92785 391 aa22.87■■□□□ 1.25
EXOSC3-202ENST00000396521 CHL1O00533 1208 aa22.86■■□□□ 1.25
EXOSC3-202ENST00000396521 RAD17O75943 681 aa22.85■■□□□ 1.25
EXOSC3-202ENST00000396521 ANXA1P04083 346 aa22.85■■□□□ 1.25
EXOSC3-202ENST00000396521 BRPF1P55201 1214 aaPredicted RBP22.85■■□□□ 1.25
EXOSC3-202ENST00000396521 GRM1Q13255 1194 aa22.85■■□□□ 1.25
EXOSC3-202ENST00000396521 PLBD2Q8NHP8 589 aa22.85■■□□□ 1.25
EXOSC3-202ENST00000396521 CNOT7Q9UIV1 285 aaKnown RBP22.85■■□□□ 1.25
EXOSC3-202ENST00000396521 THSD7BQ9C0I4 1608 aa22.85■■□□□ 1.25
EXOSC3-202ENST00000396521 SLC51AQ86UW1 340 aa22.84■■□□□ 1.25
EXOSC3-202ENST00000396521 GLIS2Q9BZE0 524 aaPredicted RBP22.84■■□□□ 1.25
EXOSC3-202ENST00000396521 HSP90B1P14625 803 aaKnown RBP22.83■■□□□ 1.25
EXOSC3-202ENST00000396521 SF3B3Q15393 1217 aaKnown RBP22.83■■□□□ 1.25
EXOSC3-202ENST00000396521 WASHC4Q2M389 1173 aa22.83■■□□□ 1.25
EXOSC3-202ENST00000396521 ANKRD13DQ6ZTN6 518 aa22.83■■□□□ 1.25
EXOSC3-202ENST00000396521 DBF4Q9UBU7 674 aaPredicted RBP22.83■■□□□ 1.25
EXOSC3-202ENST00000396521 RPS12P25398 132 aaKnown RBP22.82■■□□□ 1.24
EXOSC3-202ENST00000396521 NOGQ13253 232 aa22.82■■□□□ 1.24
EXOSC3-202ENST00000396521 NECTIN2Q92692 538 aa22.82■■□□□ 1.24
EXOSC3-202ENST00000396521 HIRAP54198 1017 aaPredicted RBP22.81■■□□□ 1.24
EXOSC3-202ENST00000396521 TRIM28Q13263 835 aaKnown RBP22.81■■□□□ 1.24
EXOSC3-202ENST00000396521 HYPKQ9NX55 129 aa22.81■■□□□ 1.24
EXOSC3-202ENST00000396521 TRPM7Q96QT4 1865 aa22.81■■□□□ 1.24
EXOSC3-202ENST00000396521 HDGFL1Q5TGJ6 251 aa22.8■■□□□ 1.24
EXOSC3-202ENST00000396521 EYA3Q99504 573 aa22.8■■□□□ 1.24
EXOSC3-202ENST00000396521 ISCA1Q9BUE6 129 aa22.8■■□□□ 1.24
EXOSC3-202ENST00000396521 CHPF2Q9P2E5 772 aa22.8■■□□□ 1.24
EXOSC3-202ENST00000396521 NSFL1CQ9UNZ2 370 aaKnown RBP22.8■■□□□ 1.24
EXOSC3-202ENST00000396521 YDJCA8MPS7 323 aa22.79■■□□□ 1.24
EXOSC3-202ENST00000396521 AOC2O75106 756 aa22.79■■□□□ 1.24
EXOSC3-202ENST00000396521 MICALL2Q8IY33 904 aa22.79■■□□□ 1.24
EXOSC3-202ENST00000396521 RUNDC1Q96C34 613 aa22.79■■□□□ 1.24
EXOSC3-202ENST00000396521 ANKRD36CQ5JPF3 1778 aa22.78■■□□□ 1.24
EXOSC3-202ENST00000396521 RGS19P49795 217 aa22.78■■□□□ 1.24
EXOSC3-202ENST00000396521 TRPM4Q8TD43 1214 aa22.78■■□□□ 1.24
EXOSC3-202ENST00000396521 ZNF408Q9H9D4 720 aa22.77■■□□□ 1.24
EXOSC3-202ENST00000396521 CCDC85CA6NKD9 419 aa22.76■■□□□ 1.23
EXOSC3-202ENST00000396521 C6orf229H3BNL8 230 aa22.76■■□□□ 1.23
EXOSC3-202ENST00000396521 NEUROD2Q15784 382 aa22.76■■□□□ 1.23
EXOSC3-202ENST00000396521 FAM89AQ96GI7 184 aa22.76■■□□□ 1.23
EXOSC3-202ENST00000396521 CFAP44Q96MT7 982 aa22.76■■□□□ 1.23
EXOSC3-202ENST00000396521 CHMP4AQ9BY43 222 aa22.76■■□□□ 1.23
EXOSC3-202ENST00000396521 LAS1LQ9Y4W2 734 aaKnown RBP22.76■■□□□ 1.23
EXOSC3-202ENST00000396521 MYBBP1AQ9BQG0 1328 aaKnown RBP22.76■■□□□ 1.23
EXOSC3-202ENST00000396521 PSMD14O00487 310 aa22.75■■□□□ 1.23
EXOSC3-202ENST00000396521 HUNKP57058 714 aa22.75■■□□□ 1.23
EXOSC3-202ENST00000396521 RPS8P62241 208 aaKnown RBP22.75■■□□□ 1.23
EXOSC3-202ENST00000396521 MLLT1Q03111 559 aaPredicted RBP22.75■■□□□ 1.23
EXOSC3-202ENST00000396521 WDR43Q15061 677 aaKnown RBP eCLIP22.75■■□□□ 1.23
EXOSC3-202ENST00000396521 KRT26Q7Z3Y9 468 aa22.75■■□□□ 1.23
EXOSC3-202ENST00000396521 USP48Q86UV5 1035 aa22.75■■□□□ 1.23
EXOSC3-202ENST00000396521 CCDC102AQ96A19 550 aa22.75■■□□□ 1.23
EXOSC3-202ENST00000396521 DCPSQ96C86 337 aaKnown RBP22.75■■□□□ 1.23
EXOSC3-202ENST00000396521 TRIM35Q9UPQ4 493 aa22.75■■□□□ 1.23
EXOSC3-202ENST00000396521 C2orf69Q8N8R5 385 aa22.74■■□□□ 1.23
EXOSC3-202ENST00000396521 CELF1Q92879 486 aaKnown RBP22.74■■□□□ 1.23
EXOSC3-202ENST00000396521 ZC3H12CQ9C0D7 883 aaKnown RBP22.74■■□□□ 1.23
EXOSC3-202ENST00000396521 IRS4O14654 1257 aaPredicted RBP22.73■■□□□ 1.23
EXOSC3-202ENST00000396521 KRT24Q2M2I5 525 aa22.73■■□□□ 1.23
EXOSC3-202ENST00000396521 FAM161AQ3B820 660 aa22.73■■□□□ 1.23
EXOSC3-202ENST00000396521 PODXL2Q9NZ53 605 aa22.73■■□□□ 1.23
EXOSC3-202ENST00000396521 POLLQ9UGP5 575 aa22.73■■□□□ 1.23
EXOSC3-202ENST00000396521 ZBTB12Q9Y330 459 aaPredicted RBP22.73■■□□□ 1.23
EXOSC3-202ENST00000396521 ATP5J2-PTCD1G3V325 749 aa22.72■■□□□ 1.23
EXOSC3-202ENST00000396521 SAMD7Q7Z3H4 446 aa22.72■■□□□ 1.23
EXOSC3-202ENST00000396521 DBNDD1Q9H9R9 158 aa22.72■■□□□ 1.23
EXOSC3-202ENST00000396521 RIMBP2O15034 1052 aa22.71■■□□□ 1.23
EXOSC3-202ENST00000396521 ECE2O60344 883 aa22.71■■□□□ 1.23
EXOSC3-202ENST00000396521 GPSM2P81274 684 aa22.71■■□□□ 1.23
EXOSC3-202ENST00000396521 GOLGA2Q08379 1002 aa22.71■■□□□ 1.23
EXOSC3-202ENST00000396521 DUSP27Q5VZP5 1158 aa22.71■■□□□ 1.23
EXOSC3-202ENST00000396521 RGMBQ6NW40 437 aa22.71■■□□□ 1.23
EXOSC3-202ENST00000396521 CCDC146Q8IYE0 955 aa22.71■■□□□ 1.23
EXOSC3-202ENST00000396521 ZBTB38Q8NAP3 1195 aaPredicted RBP22.71■■□□□ 1.23
EXOSC3-202ENST00000396521 TBC1D16Q8TBP0 767 aa22.71■■□□□ 1.23
EXOSC3-202ENST00000396521 GBA2Q9HCG7 927 aaPredicted RBP22.71■■□□□ 1.23
EXOSC3-202ENST00000396521 SAGE1Q9NXZ1 904 aa22.71■■□□□ 1.23
EXOSC3-202ENST00000396521 TSKSQ9UJT2 592 aa22.71■■□□□ 1.23
EXOSC3-202ENST00000396521 DUOX1Q9NRD9 1551 aa22.71■■□□□ 1.23
EXOSC3-202ENST00000396521 G3V3G9 751 aa22.7■■□□□ 1.22
EXOSC3-202ENST00000396521 VIL1P09327 827 aaKnown RBP22.7■■□□□ 1.22
EXOSC3-202ENST00000396521 CALD1Q05682 793 aaKnown RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms