RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 CACNA1FO60840 1977 aa16.72■□□□□ 0.27
CCHCR1-203ENST00000396268 PDIA6Q15084 440 aa16.72■□□□□ 0.27
CCHCR1-203ENST00000396268 PCDH11XQ9BZA7 1347 aa16.72■□□□□ 0.27
CCHCR1-203ENST00000396268 PCDH11YQ9BZA8 1340 aa16.72■□□□□ 0.27
CCHCR1-203ENST00000396268 C5P01031 1676 aa16.72■□□□□ 0.27
CCHCR1-203ENST00000396268 VPS53Q5VIR6 699 aa16.72■□□□□ 0.27
CCHCR1-203ENST00000396268 CHMP4AQ9BY43 222 aa16.72■□□□□ 0.27
CCHCR1-203ENST00000396268 MTMR6Q9Y217 621 aa16.72■□□□□ 0.27
CCHCR1-203ENST00000396268 KAT6BQ8WYB5 2073 aa16.72■□□□□ 0.27
CCHCR1-203ENST00000396268 SHANK3Q9BYB0 1731 aa16.71■□□□□ 0.27
CCHCR1-203ENST00000396268 ADCY9O60503 1353 aa16.71■□□□□ 0.27
CCHCR1-203ENST00000396268 ZSCAN20P17040 1043 aaPredicted RBP16.71■□□□□ 0.27
CCHCR1-203ENST00000396268 FERMT3Q86UX7 667 aa16.71■□□□□ 0.27
CCHCR1-203ENST00000396268 DBF4Q9UBU7 674 aaPredicted RBP16.71■□□□□ 0.27
CCHCR1-203ENST00000396268 TOM1O60784 492 aa16.71■□□□□ 0.26
CCHCR1-203ENST00000396268 PTCD1O75127 700 aaKnown RBP16.71■□□□□ 0.26
CCHCR1-203ENST00000396268 HOXB7P09629 217 aa16.71■□□□□ 0.26
CCHCR1-203ENST00000396268 ME3Q16798 604 aa16.71■□□□□ 0.26
CCHCR1-203ENST00000396268 MTERF4Q7Z6M4 381 aaKnown RBP16.71■□□□□ 0.26
CCHCR1-203ENST00000396268 PARP4Q9UKK3 1724 aaKnown RBP16.7■□□□□ 0.26
CCHCR1-203ENST00000396268 TTC5Q8N0Z6 440 aa16.7■□□□□ 0.26
CCHCR1-203ENST00000396268 ZSCAN31Q96LW9 406 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-203ENST00000396268 FAM227BQ96M60 508 aa16.7■□□□□ 0.26
CCHCR1-203ENST00000396268 CCDC8Q9H0W5 538 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-203ENST00000396268 SH2B1Q9NRF2 756 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-203ENST00000396268 KDM4AO75164 1064 aa16.7■□□□□ 0.26
CCHCR1-203ENST00000396268 TCEANC2Q96MN5 208 aa16.7■□□□□ 0.26
CCHCR1-203ENST00000396268 ZSWIM6Q9HCJ5 1215 aa16.7■□□□□ 0.26
CCHCR1-203ENST00000396268 RBM8AQ9Y5S9 174 aaKnown RBP16.7■□□□□ 0.26
CCHCR1-203ENST00000396268 LARP1BQ659C4 914 aaKnown RBP16.69■□□□□ 0.26
CCHCR1-203ENST00000396268 EVI5LQ96CN4 794 aa16.69■□□□□ 0.26
CCHCR1-203ENST00000396268 CCDC171Q6TFL3 1326 aa16.69■□□□□ 0.26
CCHCR1-203ENST00000396268 USP42Q9H9J4 1324 aaKnown RBP16.69■□□□□ 0.26
CCHCR1-203ENST00000396268 ERC1Q8IUD2 1116 aa16.69■□□□□ 0.26
CCHCR1-203ENST00000396268 PIBF1Q8WXW3 757 aa16.69■□□□□ 0.26
CCHCR1-203ENST00000396268 SIL1Q9H173 461 aa16.69■□□□□ 0.26
CCHCR1-203ENST00000396268 FAM173BQ6P4H8 233 aa16.68■□□□□ 0.26
CCHCR1-203ENST00000396268 G3BP1Q13283 466 aaKnown RBP eCLIP16.68■□□□□ 0.26
CCHCR1-203ENST00000396268 CREB3L3Q68CJ9 461 aa16.68■□□□□ 0.26
CCHCR1-203ENST00000396268 BCL2L12Q9HB09 334 aa16.68■□□□□ 0.26
CCHCR1-203ENST00000396268 MRC1P22897 1456 aa16.68■□□□□ 0.26
CCHCR1-203ENST00000396268 U2AF2P26368 475 aaKnown RBP eCLIP16.68■□□□□ 0.26
CCHCR1-203ENST00000396268 NMIQ13287 307 aaPredicted RBP16.68■□□□□ 0.26
CCHCR1-203ENST00000396268 BOLA2Q9H3K6 86 aa16.68■□□□□ 0.26
CCHCR1-203ENST00000396268 TPCN1Q9ULQ1 816 aa16.68■□□□□ 0.26
CCHCR1-203ENST00000396268 KIF3AQ9Y496 699 aa16.68■□□□□ 0.26
CCHCR1-203ENST00000396268 COL22A1Q8NFW1 1626 aaPredicted RBP16.67■□□□□ 0.26
CCHCR1-203ENST00000396268 MTX1Q13505 466 aa16.67■□□□□ 0.26
CCHCR1-203ENST00000396268 NECTIN1Q15223 517 aa16.67■□□□□ 0.26
CCHCR1-203ENST00000396268 KSR2Q6VAB6 950 aa16.67■□□□□ 0.26
CCHCR1-203ENST00000396268 TM6SF1Q9BZW5 370 aa16.67■□□□□ 0.26
CCHCR1-203ENST00000396268 DMTNQ08495 405 aa16.67■□□□□ 0.26
CCHCR1-203ENST00000396268 ST3GAL1Q11201 340 aa16.67■□□□□ 0.26
CCHCR1-203ENST00000396268 CAMK4Q16566 473 aa16.67■□□□□ 0.26
CCHCR1-203ENST00000396268 COL14A1Q05707 1796 aaKnown RBP16.67■□□□□ 0.26
CCHCR1-203ENST00000396268 COL9A3Q14050 684 aaPredicted RBP16.66■□□□□ 0.26
CCHCR1-203ENST00000396268 FSD1Q9BTV5 496 aa16.66■□□□□ 0.26
CCHCR1-203ENST00000396268 PYCARDQ9ULZ3 195 aa16.66■□□□□ 0.26
CCHCR1-203ENST00000396268 ALDH1L1O75891 902 aa16.66■□□□□ 0.26
CCHCR1-203ENST00000396268 EAF2Q96CJ1 260 aaPredicted RBP16.66■□□□□ 0.26
CCHCR1-203ENST00000396268 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.66■□□□□ 0.26
CCHCR1-203ENST00000396268 CCDC192P0DO97 292 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 KRT85P78386 507 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 NKX1-1Q15270 411 aaPredicted RBP16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 CDC37L1Q7L3B6 337 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 SUCLG2Q96I99 432 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 FMNL2Q96PY5 1086 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 DDX21Q9NR30 783 aaKnown RBP eCLIP16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 HDAC5Q9UQL6 1122 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 TOGARAM1Q9Y4F4 1720 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 SNRPA1P09661 255 aaKnown RBP16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 STK3Q13188 491 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 XAGE3Q8WTP9 111 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 FUCA2Q9BTY2 467 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 BICC1Q9H694 974 aaKnown RBP16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 TLR7Q9NYK1 1049 aaKnown RBP16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 ASAP1Q9ULH1 1129 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 GOLGA6L4A6NEF3 574 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 PSMA5P28066 241 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 PDE4CQ08493 712 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 COPS6Q7L5N1 327 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 TTC6Q86TZ1 520 aa16.65■□□□□ 0.26
CCHCR1-203ENST00000396268 GRM8O00222 908 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 SLC27A2O14975 620 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 SASH1O94885 1247 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 BLOC1S2Q6QNY1 142 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 KLHDC4Q8TBB5 520 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 GLI3P10071 1580 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 A0A0D9SFI3 127 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 RIOK3O14730 519 aaKnown RBP16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 AP5Z1O43299 807 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 LRP10Q7Z4F1 713 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 PDCL2Q8N4E4 241 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 PIGBQ92521 554 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 MAP4K1Q92918 833 aa16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 CCDC9Q9Y3X0 531 aaKnown RBP16.64■□□□□ 0.25
CCHCR1-203ENST00000396268 TFIP11Q9UBB9 837 aaKnown RBP16.63■□□□□ 0.25
CCHCR1-203ENST00000396268 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.63■□□□□ 0.25
CCHCR1-203ENST00000396268 ERVV-2B6SEH9 535 aa16.63■□□□□ 0.25
CCHCR1-203ENST00000396268 HIP1O00291 1037 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms