RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 CCDC97Q96F63 343 aaPredicted RBP10.51□□□□□ -0.73
MSH5-205ENST00000395853 TSPAN18Q96SJ8 248 aa10.51□□□□□ -0.73
MSH5-205ENST00000395853 CCDC61Q9Y6R9 512 aa10.51□□□□□ -0.73
MSH5-205ENST00000395853 ANKRD26Q9UPS8 1709 aa10.51□□□□□ -0.73
MSH5-205ENST00000395853 RNF214Q8ND24 703 aa10.51□□□□□ -0.73
MSH5-205ENST00000395853 KIAA1524Q8TCG1 905 aa10.51□□□□□ -0.73
MSH5-205ENST00000395853 GPT2Q8TD30 523 aa10.51□□□□□ -0.73
MSH5-205ENST00000395853 SNX21Q969T3 373 aa10.51□□□□□ -0.73
MSH5-205ENST00000395853 SUDS3Q9H7L9 328 aaPredicted RBP10.51□□□□□ -0.73
MSH5-205ENST00000395853 ANAPC4Q9UJX5 808 aa10.51□□□□□ -0.73
MSH5-205ENST00000395853 OVOS2A0A0G2JMS6 1433 aa10.51□□□□□ -0.73
MSH5-205ENST00000395853 OVOS2A0A0J9YW53 1432 aa10.51□□□□□ -0.73
MSH5-205ENST00000395853 BCL9O00512 1426 aa10.51□□□□□ -0.73
MSH5-205ENST00000395853 OVOS2Q6IE36 1432 aa10.51□□□□□ -0.73
MSH5-205ENST00000395853 PEAK1Q9H792 1746 aa10.51□□□□□ -0.73
MSH5-205ENST00000395853 U2AF1L5P0DN76 240 aaPredicted RBP10.5□□□□□ -0.73
MSH5-205ENST00000395853 FBLN1P23142 703 aa10.5□□□□□ -0.73
MSH5-205ENST00000395853 U2AF1Q01081 240 aaKnown RBP eCLIP10.5□□□□□ -0.731e-10■■□□□ 14.2
MSH5-205ENST00000395853 KDM4CQ9H3R0 1056 aa10.5□□□□□ -0.73
MSH5-205ENST00000395853 ETAA1Q9NY74 926 aa10.5□□□□□ -0.73
MSH5-205ENST00000395853 NAIF1Q69YI7 327 aaPredicted RBP10.5□□□□□ -0.73
MSH5-205ENST00000395853 LARP1Q6PKG0 1096 aaKnown RBP10.5□□□□□ -0.73
MSH5-205ENST00000395853 CASZ1Q86V15 1759 aa10.5□□□□□ -0.73
MSH5-205ENST00000395853 FBXO18Q8NFZ0 1043 aa10.5□□□□□ -0.73
MSH5-205ENST00000395853 GOLGA5Q8TBA6 731 aa10.5□□□□□ -0.73
MSH5-205ENST00000395853 KIF20BQ96Q89 1820 aa10.5□□□□□ -0.73
MSH5-205ENST00000395853 CRB1P82279 1406 aa10.5□□□□□ -0.73
MSH5-205ENST00000395853 ACEP12821 1306 aa10.49□□□□□ -0.73
MSH5-205ENST00000395853 BCAR3O75815 825 aa10.49□□□□□ -0.73
MSH5-205ENST00000395853 TPM1P09493 284 aa10.49□□□□□ -0.73
MSH5-205ENST00000395853 SCP2P22307 547 aa10.49□□□□□ -0.73
MSH5-205ENST00000395853 SSFA2P28290 1259 aa10.49□□□□□ -0.73
MSH5-205ENST00000395853 TACO1Q9BSH4 297 aaKnown RBP10.49□□□□□ -0.73
MSH5-205ENST00000395853 SMC2O95347 1197 aa10.49□□□□□ -0.73
MSH5-205ENST00000395853 KLHL23Q8NBE8 558 aa10.49□□□□□ -0.73
MSH5-205ENST00000395853 ARHGEF1Q92888 912 aaKnown RBP10.49□□□□□ -0.73
MSH5-205ENST00000395853 TEX13AQ9BXU3 409 aaPredicted RBP10.49□□□□□ -0.73
MSH5-205ENST00000395853 COL5A2P05997 1499 aaPredicted RBP10.49□□□□□ -0.73
MSH5-205ENST00000395853 SBF2Q86WG5 1849 aa10.49□□□□□ -0.73
MSH5-205ENST00000395853 ERCC3P19447 782 aa10.49□□□□□ -0.73
MSH5-205ENST00000395853 TPM4P67936 248 aa10.49□□□□□ -0.73
MSH5-205ENST00000395853 NAA30Q147X3 362 aaPredicted RBP10.49□□□□□ -0.73
MSH5-205ENST00000395853 AP1ARQ63HQ0 302 aa10.49□□□□□ -0.73
MSH5-205ENST00000395853 FAXDC2Q96IV6 333 aa10.49□□□□□ -0.73
MSH5-205ENST00000395853 SYCE3A1L190 88 aa10.48□□□□□ -0.73
MSH5-205ENST00000395853 SLFNL1Q499Z3 407 aa10.48□□□□□ -0.73
MSH5-205ENST00000395853 ABTB2Q8N961 1025 aa10.48□□□□□ -0.73
MSH5-205ENST00000395853 CCDC112Q8NEF3 446 aa10.48□□□□□ -0.73
MSH5-205ENST00000395853 TATDN2Q93075 761 aa10.48□□□□□ -0.73
MSH5-205ENST00000395853 U2SURPO15042 1029 aaKnown RBP10.48□□□□□ -0.73
MSH5-205ENST00000395853 NEBLO76041 1014 aa10.48□□□□□ -0.73
MSH5-205ENST00000395853 IGHDP01880 384 aa10.48□□□□□ -0.73
MSH5-205ENST00000395853 SF3A1Q15459 793 aaKnown RBP10.48□□□□□ -0.73
MSH5-205ENST00000395853 MCTP1Q6DN14 999 aa10.48□□□□□ -0.73
MSH5-205ENST00000395853 MKL1Q969V6 931 aa10.48□□□□□ -0.73
MSH5-205ENST00000395853 CDCA7Q9BWT1 371 aaPredicted RBP10.48□□□□□ -0.73
MSH5-205ENST00000395853 SMC3Q9UQE7 1217 aa10.48□□□□□ -0.73
MSH5-205ENST00000395853 COL3A1P02461 1466 aaPredicted RBP10.48□□□□□ -0.73
MSH5-205ENST00000395853 GCP02774 474 aa10.47□□□□□ -0.73
MSH5-205ENST00000395853 ADCY2Q08462 1091 aa10.47□□□□□ -0.73
MSH5-205ENST00000395853 FBXO38Q6PIJ6 1188 aa10.47□□□□□ -0.73
MSH5-205ENST00000395853 GTF3C6Q969F1 213 aa10.47□□□□□ -0.73
MSH5-205ENST00000395853 LMBRD1Q9NUN5 540 aa10.47□□□□□ -0.73
MSH5-205ENST00000395853 AATKQ6ZMQ8 1374 aa10.47□□□□□ -0.73
MSH5-205ENST00000395853 HTATSF1O43719 755 aaKnown RBP10.47□□□□□ -0.73
MSH5-205ENST00000395853 NPM3O75607 178 aaKnown RBP10.47□□□□□ -0.73
MSH5-205ENST00000395853 MIEF2Q96C03 454 aa10.47□□□□□ -0.73
MSH5-205ENST00000395853 V9GYY5 206 aaPredicted RBP10.47□□□□□ -0.73
MSH5-205ENST00000395853 PPIP5K1Q6PFW1 1433 aa10.47□□□□□ -0.73
MSH5-205ENST00000395853 MAP2P11137 1827 aaKnown RBP10.46□□□□□ -0.73
MSH5-205ENST00000395853 ANKRD18BA2A2Z9 1011 aa10.46□□□□□ -0.73
MSH5-205ENST00000395853 NEFHP12036 1026 aa10.46□□□□□ -0.73
MSH5-205ENST00000395853 LRRC37A3O60309 1634 aa10.46□□□□□ -0.74
MSH5-205ENST00000395853 C21orf2O43822 256 aa10.46□□□□□ -0.74
MSH5-205ENST00000395853 NUTM2GQ5VZR2 741 aa10.46□□□□□ -0.74
MSH5-205ENST00000395853 FMNL3Q8IVF7 1028 aa10.46□□□□□ -0.74
MSH5-205ENST00000395853 PLEKHF1Q96S99 279 aa10.46□□□□□ -0.74
MSH5-205ENST00000395853 UVSSAQ2YD98 709 aa10.45□□□□□ -0.74
MSH5-205ENST00000395853 IQUBQ8NA54 791 aa10.45□□□□□ -0.74
MSH5-205ENST00000395853 DNAAF4Q8WXU2 420 aa10.45□□□□□ -0.74
MSH5-205ENST00000395853 RBM27Q9P2N5 1060 aaKnown RBP10.45□□□□□ -0.74
MSH5-205ENST00000395853 SLIT3O75094 1523 aa10.45□□□□□ -0.74
MSH5-205ENST00000395853 PTPRCP08575 1304 aa10.45□□□□□ -0.74
MSH5-205ENST00000395853 EIF3CLB5ME19 914 aaKnown RBP10.45□□□□□ -0.74
MSH5-205ENST00000395853 KINO60870 393 aaKnown RBP10.45□□□□□ -0.74
MSH5-205ENST00000395853 ABCD1P33897 745 aa10.45□□□□□ -0.74
MSH5-205ENST00000395853 DDB1Q16531 1140 aa10.45□□□□□ -0.74
MSH5-205ENST00000395853 MSL3Q8N5Y2 521 aaKnown RBP10.45□□□□□ -0.74
MSH5-205ENST00000395853 SMARCE1Q969G3 411 aa10.45□□□□□ -0.74
MSH5-205ENST00000395853 EIF3CQ99613 913 aaKnown RBP10.45□□□□□ -0.74
MSH5-205ENST00000395853 SLC24A3Q9HC58 644 aa10.45□□□□□ -0.74
MSH5-205ENST00000395853 CPSF2Q9P2I0 782 aaKnown RBP10.45□□□□□ -0.74
MSH5-205ENST00000395853 WNK3Q9BYP7 1800 aa10.45□□□□□ -0.74
MSH5-205ENST00000395853 CPSF1Q10570 1443 aaKnown RBP10.45□□□□□ -0.74
MSH5-205ENST00000395853 CPP00450 1065 aa10.44□□□□□ -0.74
MSH5-205ENST00000395853 IVLP07476 585 aa10.44□□□□□ -0.74
MSH5-205ENST00000395853 NME9Q86XW9 330 aa10.44□□□□□ -0.74
MSH5-205ENST00000395853 WDR63Q8IWG1 891 aa10.44□□□□□ -0.74
MSH5-205ENST00000395853 TSPY26PQ9H489 355 aa10.44□□□□□ -0.74
MSH5-205ENST00000395853 TRAF1Q13077 416 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms