RNA–Protein interactions for RNA: ENST00000395740.5

FGD4-201, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 2,691 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-201ENST00000395740 CLASRPQ8N2M8 674 aaKnown RBP5.99□□□□□ -1.45
FGD4-201ENST00000395740 CCDC112Q8NEF3 446 aa5.99□□□□□ -1.45
FGD4-201ENST00000395740 FOXD4L4Q8WXT5 416 aaPredicted RBP5.99□□□□□ -1.45
FGD4-201ENST00000395740 ZNF830Q96NB3 372 aaPredicted RBP5.99□□□□□ -1.45
FGD4-201ENST00000395740 BPIFA3Q9BQP9 254 aa5.99□□□□□ -1.45
FGD4-201ENST00000395740 CBX8Q9HC52 389 aa5.99□□□□□ -1.45
FGD4-201ENST00000395740 CAMTA1Q9Y6Y1 1673 aa5.99□□□□□ -1.45
FGD4-201ENST00000395740 PLEKHG2Q9H7P9 1386 aa5.98□□□□□ -1.45
FGD4-201ENST00000395740 LAMA4Q16363 1823 aa5.98□□□□□ -1.45
FGD4-201ENST00000395740 HSP90AB2PQ58FF8 381 aa5.98□□□□□ -1.45
FGD4-201ENST00000395740 BEND3Q5T5X7 828 aa5.98□□□□□ -1.45
FGD4-201ENST00000395740 RYDENQ9NUL5 291 aaKnown RBP5.98□□□□□ -1.45
FGD4-201ENST00000395740 AMOTL2Q9Y2J4 779 aa5.98□□□□□ -1.45
FGD4-201ENST00000395740 LTN1O94822 1766 aa5.98□□□□□ -1.45
FGD4-201ENST00000395740 PITPNM2Q9BZ72 1349 aa5.98□□□□□ -1.45
FGD4-201ENST00000395740 MED23Q9ULK4 1368 aa5.98□□□□□ -1.45
FGD4-201ENST00000395740 PSDA5PKW4 1024 aaPredicted RBP5.98□□□□□ -1.45
FGD4-201ENST00000395740 CCP110O43303 1012 aa5.98□□□□□ -1.45
FGD4-201ENST00000395740 ST3GAL1Q11201 340 aa5.98□□□□□ -1.45
FGD4-201ENST00000395740 IQCB1Q15051 598 aa5.98□□□□□ -1.45
FGD4-201ENST00000395740 ME3Q16798 604 aa5.98□□□□□ -1.45
FGD4-201ENST00000395740 CCDC186Q7Z3E2 898 aa5.98□□□□□ -1.45
FGD4-201ENST00000395740 CCDC83Q8IWF9 413 aa5.98□□□□□ -1.45
FGD4-201ENST00000395740 KRT222Q8N1A0 295 aa5.98□□□□□ -1.45
FGD4-201ENST00000395740 KIF18AQ8NI77 898 aa5.98□□□□□ -1.45
FGD4-201ENST00000395740 OSBPL5Q9H0X9 879 aaPredicted RBP5.98□□□□□ -1.45
FGD4-201ENST00000395740 IL25Q9H293 177 aa5.98□□□□□ -1.45
FGD4-201ENST00000395740 EID1Q9Y6B2 187 aa5.98□□□□□ -1.45
FGD4-201ENST00000395740 NPHP4O75161 1426 aaPredicted RBP5.97□□□□□ -1.45
FGD4-201ENST00000395740 RGPD8O14715 1765 aaPredicted RBP5.97□□□□□ -1.45
FGD4-201ENST00000395740 MYO1BO43795 1136 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 SLFN14P0C7P3 912 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 PTGS1P23219 599 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 RPS6KB1P23443 525 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 CREB3L3Q68CJ9 461 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 NAA16Q6N069 864 aaPredicted RBP5.97□□□□□ -1.45
FGD4-201ENST00000395740 LRRC8AQ8IWT6 810 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 THEMISQ8N1K5 641 aaPredicted RBP5.97□□□□□ -1.45
FGD4-201ENST00000395740 LEO1Q8WVC0 666 aaPredicted RBP5.97□□□□□ -1.45
FGD4-201ENST00000395740 DNAAF4Q8WXU2 420 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 SPATA32Q96LK8 384 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 JAKMIP1Q96N16 626 aaKnown RBP5.97□□□□□ -1.45
FGD4-201ENST00000395740 EYA1Q99502 592 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 TSPYL1Q9H0U9 437 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 L2HGDHQ9H9P8 463 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 TMEM51Q9NW97 253 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 RCOR1Q9UKL0 485 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 HEG1Q9ULI3 1381 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 GOLGA6L4A6NEF3 574 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 KCNA6P17658 529 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 ZNF165P49910 485 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 STX1AQ16623 288 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 ANO6Q4KMQ2 910 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 CEP135Q66GS9 1140 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 BLOC1S2Q6QNY1 142 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 FBXL16Q8N461 479 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 SRRTQ9BXP5 876 aaKnown RBP5.97□□□□□ -1.45
FGD4-201ENST00000395740 TRIM5Q9C035 493 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 ARHGAP23Q9P227 1491 aa5.97□□□□□ -1.45
FGD4-201ENST00000395740 FER1L4A9Z1Z3 1794 aa5.96□□□□□ -1.45
FGD4-201ENST00000395740 SRGAP3O43295 1099 aa5.96□□□□□ -1.45
FGD4-201ENST00000395740 HMGB1P09429 215 aaKnown RBP5.96□□□□□ -1.45
FGD4-201ENST00000395740 TPM1P09493 284 aa5.96□□□□□ -1.45
FGD4-201ENST00000395740 RESTQ13127 1097 aa5.96□□□□□ -1.45
FGD4-201ENST00000395740 TERF2Q15554 542 aa5.96□□□□□ -1.45
FGD4-201ENST00000395740 NUTM1Q86Y26 1132 aa5.96□□□□□ -1.45
FGD4-201ENST00000395740 SMARCC2Q8TAQ2 1214 aa5.96□□□□□ -1.45
FGD4-201ENST00000395740 ANO10Q9NW15 660 aa5.96□□□□□ -1.45
FGD4-201ENST00000395740 RBM8AQ9Y5S9 174 aaKnown RBP5.96□□□□□ -1.45
FGD4-201ENST00000395740 TMEM94Q12767 1356 aa5.96□□□□□ -1.45
FGD4-201ENST00000395740 ABCC6O95255 1503 aa5.96□□□□□ -1.46
FGD4-201ENST00000395740 DDX60Q8IY21 1712 aaKnown RBP5.96□□□□□ -1.46
FGD4-201ENST00000395740 GOLGA6L19H0YKK7 550 aa5.96□□□□□ -1.46
FGD4-201ENST00000395740 SLC27A2O14975 620 aa5.96□□□□□ -1.46
FGD4-201ENST00000395740 SOX12O15370 315 aa5.96□□□□□ -1.46
FGD4-201ENST00000395740 LARGE1O95461 756 aa5.96□□□□□ -1.46
FGD4-201ENST00000395740 LIG1P18858 919 aa5.96□□□□□ -1.46
FGD4-201ENST00000395740 U2AF2P26368 475 aaKnown RBP eCLIP5.96□□□□□ -1.46
FGD4-201ENST00000395740 BMS1Q14692 1282 aaKnown RBP5.96□□□□□ -1.46
FGD4-201ENST00000395740 PTPN14Q15678 1187 aa5.96□□□□□ -1.46
FGD4-201ENST00000395740 TPD52L1Q16890 204 aaPredicted RBP5.96□□□□□ -1.46
FGD4-201ENST00000395740 HDGFL1Q5TGJ6 251 aa5.96□□□□□ -1.46
FGD4-201ENST00000395740 CWC27Q6UX04 472 aaKnown RBP5.96□□□□□ -1.46
FGD4-201ENST00000395740 IL17REQ8NFR9 667 aa5.96□□□□□ -1.46
FGD4-201ENST00000395740 NAT10Q9H0A0 1025 aaKnown RBP5.96□□□□□ -1.46
FGD4-201ENST00000395740 DACT1Q9NYF0 836 aa5.96□□□□□ -1.46
FGD4-201ENST00000395740 CALCOCO1Q9P1Z2 691 aa5.96□□□□□ -1.46
FGD4-201ENST00000395740 CLIP2Q9UDT6 1046 aa5.96□□□□□ -1.46
FGD4-201ENST00000395740 TPCN1Q9ULQ1 816 aa5.96□□□□□ -1.46
FGD4-201ENST00000395740 SLIT3O75094 1523 aa5.95□□□□□ -1.46
FGD4-201ENST00000395740 NRDCO43847 1150 aa5.95□□□□□ -1.46
FGD4-201ENST00000395740 SLU7O95391 586 aaKnown RBP5.95□□□□□ -1.46
FGD4-201ENST00000395740 EIF4A1P60842 406 aaKnown RBP5.95□□□□□ -1.46
FGD4-201ENST00000395740 PTH1RQ03431 593 aa5.95□□□□□ -1.46
FGD4-201ENST00000395740 TSHZ3Q63HK5 1081 aa5.95□□□□□ -1.46
FGD4-201ENST00000395740 PRPF40BQ6NWY9 871 aaKnown RBP5.95□□□□□ -1.46
FGD4-201ENST00000395740 NOL8Q76FK4 1167 aaKnown RBP5.95□□□□□ -1.46
FGD4-201ENST00000395740 FCHSD1Q86WN1 690 aa5.95□□□□□ -1.46
FGD4-201ENST00000395740 CCDC150Q8NCX0 1101 aa5.95□□□□□ -1.46
FGD4-201ENST00000395740 CACTINQ8WUQ7 758 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms