RNA–Protein interactions for RNA: ENST00000395388.6

HLA-DRA-202, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DRA, Length 1,280 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-202ENST00000395388 DPEP1P16444 411 aa15.69■□□□□ 0.1
HLA-DRA-202ENST00000395388 LMBR1LQ6UX01 489 aa15.69■□□□□ 0.1
HLA-DRA-202ENST00000395388 TTLL11Q8NHH1 800 aa15.69■□□□□ 0.1
HLA-DRA-202ENST00000395388 CNKSR1Q969H4 720 aa15.69■□□□□ 0.1
HLA-DRA-202ENST00000395388 CRBNQ96SW2 442 aa15.69■□□□□ 0.1
HLA-DRA-202ENST00000395388 SYT17Q9BSW7 474 aa15.69■□□□□ 0.1
HLA-DRA-202ENST00000395388 LRRFIP2Q9Y608 721 aaKnown RBP15.69■□□□□ 0.1
HLA-DRA-202ENST00000395388 CSF1RP07333 972 aa15.68■□□□□ 0.1
HLA-DRA-202ENST00000395388 SRGNP10124 158 aa15.68■□□□□ 0.1
HLA-DRA-202ENST00000395388 CHRNA5P30532 468 aa15.68■□□□□ 0.1
HLA-DRA-202ENST00000395388 FOXO4P98177 505 aa15.68■□□□□ 0.1
HLA-DRA-202ENST00000395388 AAMPQ13685 434 aa15.68■□□□□ 0.1
HLA-DRA-202ENST00000395388 CCDC57Q2TAC2 916 aa15.68■□□□□ 0.1
HLA-DRA-202ENST00000395388 CRY2Q49AN0 593 aa15.68■□□□□ 0.1
HLA-DRA-202ENST00000395388 STYK1Q6J9G0 422 aa15.68■□□□□ 0.1
HLA-DRA-202ENST00000395388 CCDC85AQ96PX6 553 aaPredicted RBP15.68■□□□□ 0.1
HLA-DRA-202ENST00000395388 BICC1Q9H694 974 aaKnown RBP15.68■□□□□ 0.1
HLA-DRA-202ENST00000395388 PIM2Q9P1W9 311 aa15.68■□□□□ 0.1
HLA-DRA-202ENST00000395388 LRP5O75197 1615 aa15.68■□□□□ 0.1
HLA-DRA-202ENST00000395388 ANKRD18BA2A2Z9 1011 aa15.67■□□□□ 0.1
HLA-DRA-202ENST00000395388 HOXA10P31260 410 aaPredicted RBP15.67■□□□□ 0.1
HLA-DRA-202ENST00000395388 IFIT5Q13325 482 aaKnown RBP15.67■□□□□ 0.1
HLA-DRA-202ENST00000395388 TAF7LQ5H9L4 462 aa15.67■□□□□ 0.1
HLA-DRA-202ENST00000395388 C3orf67Q6ZVT6 689 aa15.67■□□□□ 0.1
HLA-DRA-202ENST00000395388 CRAMP1Q96RY5 1269 aa15.67■□□□□ 0.1
HLA-DRA-202ENST00000395388 TMX4Q9H1E5 349 aaPredicted RBP15.67■□□□□ 0.1
HLA-DRA-202ENST00000395388 ZBTB40Q9NUA8 1239 aa15.67■□□□□ 0.1
HLA-DRA-202ENST00000395388 DDX60Q8IY21 1712 aaKnown RBP15.66■□□□□ 0.1
HLA-DRA-202ENST00000395388 ANKRD31Q8N7Z5 1873 aa15.66■□□□□ 0.1
HLA-DRA-202ENST00000395388 EPHA10Q5JZY3 1008 aa15.66■□□□□ 0.1
HLA-DRA-202ENST00000395388 KAZALD1Q96I82 304 aa15.66■□□□□ 0.1
HLA-DRA-202ENST00000395388 CDC5LQ99459 802 aaKnown RBP15.66■□□□□ 0.1
HLA-DRA-202ENST00000395388 KIF13BQ9NQT8 1826 aa15.66■□□□□ 0.1
HLA-DRA-202ENST00000395388 LAMB2P55268 1798 aa15.65■□□□□ 0.1
HLA-DRA-202ENST00000395388 BBOX1O75936 387 aa15.65■□□□□ 0.1
HLA-DRA-202ENST00000395388 ITGA6P23229 1130 aa15.65■□□□□ 0.1
HLA-DRA-202ENST00000395388 IRX6P78412 446 aaPredicted RBP15.65■□□□□ 0.1
HLA-DRA-202ENST00000395388 RABL6Q3YEC7 729 aaPredicted RBP15.65■□□□□ 0.1
HLA-DRA-202ENST00000395388 ANKRD18AQ8IVF6 992 aa15.65■□□□□ 0.1
HLA-DRA-202ENST00000395388 TTLL6Q8N841 843 aa15.65■□□□□ 0.1
HLA-DRA-202ENST00000395388 NLGN2Q8NFZ4 835 aa15.65■□□□□ 0.1
HLA-DRA-202ENST00000395388 GREM2Q9H772 168 aa15.65■□□□□ 0.1
HLA-DRA-202ENST00000395388 C1orf115Q9H7X2 142 aa15.65■□□□□ 0.1
HLA-DRA-202ENST00000395388 MYH3P11055 1940 aa15.64■□□□□ 0.09
HLA-DRA-202ENST00000395388 HOXD11P31277 338 aaPredicted RBP15.64■□□□□ 0.09
HLA-DRA-202ENST00000395388 IGHMBP2P38935 993 aaKnown RBP15.64■□□□□ 0.09
HLA-DRA-202ENST00000395388 RPS8P62241 208 aaKnown RBP15.64■□□□□ 0.09
HLA-DRA-202ENST00000395388 ATP8B2P98198 1209 aa15.64■□□□□ 0.09
HLA-DRA-202ENST00000395388 GRAPQ13588 217 aa15.64■□□□□ 0.09
HLA-DRA-202ENST00000395388 DALRD3Q5D0E6 543 aaKnown RBP15.64■□□□□ 0.09
HLA-DRA-202ENST00000395388 RPAP2Q8IXW5 612 aaPredicted RBP15.64■□□□□ 0.09
HLA-DRA-202ENST00000395388 ANKRD44Q8N8A2 993 aa15.64■□□□□ 0.09
HLA-DRA-202ENST00000395388 GRAPLQ8TC17 118 aaPredicted RBP15.64■□□□□ 0.09
HLA-DRA-202ENST00000395388 MPHOSPH8Q99549 860 aa15.64■□□□□ 0.09
HLA-DRA-202ENST00000395388 RTL9Q8NET4 1388 aa15.63■□□□□ 0.09
HLA-DRA-202ENST00000395388 SRGAP3O43295 1099 aa15.63■□□□□ 0.09
HLA-DRA-202ENST00000395388 KCNA3P22001 575 aa15.63■□□□□ 0.09
HLA-DRA-202ENST00000395388 FAM161AQ3B820 660 aa15.63■□□□□ 0.09
HLA-DRA-202ENST00000395388 TMC4Q7Z404 712 aa15.63■□□□□ 0.09
HLA-DRA-202ENST00000395388 EXOC6Q8TAG9 804 aa15.63■□□□□ 0.09
HLA-DRA-202ENST00000395388 SEC31BQ9NQW1 1179 aa15.63■□□□□ 0.09
HLA-DRA-202ENST00000395388 DCAF8L1A6NGE4 600 aa15.62■□□□□ 0.09
HLA-DRA-202ENST00000395388 HMMRO75330 724 aa15.62■□□□□ 0.09
HLA-DRA-202ENST00000395388 BCS1LQ9Y276 419 aa15.62■□□□□ 0.09
HLA-DRA-202ENST00000395388 TNRC6CQ9HCJ0 1690 aaKnown RBP15.62■□□□□ 0.09
HLA-DRA-202ENST00000395388 PPEF1O14829 653 aaPredicted RBP15.61■□□□□ 0.09
HLA-DRA-202ENST00000395388 MTX1Q13505 466 aa15.61■□□□□ 0.09
HLA-DRA-202ENST00000395388 PRPF40BQ6NWY9 871 aaKnown RBP15.61■□□□□ 0.09
HLA-DRA-202ENST00000395388 PELP1Q8IZL8 1130 aaKnown RBP15.61■□□□□ 0.09
HLA-DRA-202ENST00000395388 SOGA3Q5TF21 947 aa15.6■□□□□ 0.09
HLA-DRA-202ENST00000395388 CC2D2BQ6DHV5 1058 aa15.6■□□□□ 0.09
HLA-DRA-202ENST00000395388 CEP85Q6P2H3 762 aa15.6■□□□□ 0.09
HLA-DRA-202ENST00000395388 LDHAL6AQ6ZMR3 332 aa15.6■□□□□ 0.09
HLA-DRA-202ENST00000395388 CELF1Q92879 486 aaKnown RBP15.6■□□□□ 0.09
HLA-DRA-202ENST00000395388 CNNM1Q9NRU3 951 aa15.6■□□□□ 0.09
HLA-DRA-202ENST00000395388 ZNF219Q9P2Y4 722 aaPredicted RBP15.6■□□□□ 0.09
HLA-DRA-202ENST00000395388 WWC3Q9ULE0 1092 aa15.6■□□□□ 0.09
HLA-DRA-202ENST00000395388 GPR162Q16538 588 aa15.59■□□□□ 0.09
HLA-DRA-202ENST00000395388 SP8Q8IXZ3 490 aa15.59■□□□□ 0.09
HLA-DRA-202ENST00000395388 ZNF594Q96JF6 807 aaPredicted RBP15.59■□□□□ 0.09
HLA-DRA-202ENST00000395388 BSDC1Q9NW68 430 aaPredicted RBP15.59■□□□□ 0.09
HLA-DRA-202ENST00000395388 C21orf2O43822 256 aa15.58■□□□□ 0.08
HLA-DRA-202ENST00000395388 G3BP1Q13283 466 aaKnown RBP eCLIP15.58■□□□□ 0.08
HLA-DRA-202ENST00000395388 GRIPAP1Q4V328 841 aa15.58■□□□□ 0.08
HLA-DRA-202ENST00000395388 POTEDQ86YR6 584 aa15.58■□□□□ 0.08
HLA-DRA-202ENST00000395388 SSH3Q8TE77 659 aa15.58■□□□□ 0.08
HLA-DRA-202ENST00000395388 FBXO3Q9UK99 471 aa15.58■□□□□ 0.08
HLA-DRA-202ENST00000395388 ATP6V0A2Q9Y487 856 aa15.58■□□□□ 0.08
HLA-DRA-202ENST00000395388 COL11A2P13942 1736 aaPredicted RBP15.57■□□□□ 0.08
HLA-DRA-202ENST00000395388 DLEC1Q9Y238 1755 aa15.57■□□□□ 0.08
HLA-DRA-202ENST00000395388 PNMA6EA0A0J9YXQ4 647 aa15.57■□□□□ 0.08
HLA-DRA-202ENST00000395388 PTPN12Q05209 780 aaKnown RBP15.57■□□□□ 0.08
HLA-DRA-202ENST00000395388 POLA2Q14181 598 aa15.57■□□□□ 0.08
HLA-DRA-202ENST00000395388 ANKRD2Q9GZV1 360 aa15.57■□□□□ 0.08
HLA-DRA-202ENST00000395388 COPRSQ9NQ92 184 aa15.57■□□□□ 0.08
HLA-DRA-202ENST00000395388 SURF6O75683 361 aaKnown RBP15.56■□□□□ 0.08
HLA-DRA-202ENST00000395388 RFX5P48382 616 aaPredicted RBP15.56■□□□□ 0.08
HLA-DRA-202ENST00000395388 OS9Q13438 667 aaPredicted RBP15.56■□□□□ 0.08
HLA-DRA-202ENST00000395388 CCDC93Q567U6 631 aa15.56■□□□□ 0.08
HLA-DRA-202ENST00000395388 HSP90AB4PQ58FF6 505 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms