RNA–Protein interactions for RNA: ENST00000395366.2

PPP1CB-203, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 4,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-203ENST00000395366 HMGB2P26583 209 aaKnown RBP17.24■□□□□ 0.35
PPP1CB-203ENST00000395366 NBPF5PQ86XG9 351 aaPredicted RBP17.24■□□□□ 0.35
PPP1CB-203ENST00000395366 C8orf76Q96K31 380 aa17.24■□□□□ 0.35
PPP1CB-203ENST00000395366 DLC1Q96QB1 1528 aa17.24■□□□□ 0.35
PPP1CB-203ENST00000395366 NEURL1BA8MQ27 555 aa17.24■□□□□ 0.35
PPP1CB-203ENST00000395366 WASF1Q92558 559 aa17.24■□□□□ 0.35
PPP1CB-203ENST00000395366 TIMM10P62072 90 aa17.23■□□□□ 0.35
PPP1CB-203ENST00000395366 SAMD1Q6SPF0 538 aaPredicted RBP17.23■□□□□ 0.35
PPP1CB-203ENST00000395366 EYA2O00167 538 aa17.23■□□□□ 0.35
PPP1CB-203ENST00000395366 DZIP1Q86YF9 867 aaKnown RBP17.23■□□□□ 0.35
PPP1CB-203ENST00000395366 CDCA7Q9BWT1 371 aaPredicted RBP17.23■□□□□ 0.35
PPP1CB-203ENST00000395366 RFC4P35249 363 aa17.23■□□□□ 0.35
PPP1CB-203ENST00000395366 TNNI3KQ59H18 835 aa17.23■□□□□ 0.35
PPP1CB-203ENST00000395366 LRRC2Q9BYS8 371 aa17.23■□□□□ 0.35
PPP1CB-203ENST00000395366 FPGT-TNNI3KV9GXZ4 949 aa17.23■□□□□ 0.35
PPP1CB-203ENST00000395366 TPM2P07951 284 aa17.22■□□□□ 0.35
PPP1CB-203ENST00000395366 TNNT3P45378 269 aaPredicted RBP17.22■□□□□ 0.35
PPP1CB-203ENST00000395366 ZGPATQ8N5A5 531 aaKnown RBP17.22■□□□□ 0.35
PPP1CB-203ENST00000395366 IFIT3O14879 490 aaKnown RBP17.22■□□□□ 0.35
PPP1CB-203ENST00000395366 KLHL40Q2TBA0 621 aa17.22■□□□□ 0.35
PPP1CB-203ENST00000395366 CREB3L3Q68CJ9 461 aa17.22■□□□□ 0.35
PPP1CB-203ENST00000395366 ZNF592Q92610 1267 aa17.22■□□□□ 0.35
PPP1CB-203ENST00000395366 DBNDD2Q9BQY9 259 aa17.22■□□□□ 0.35
PPP1CB-203ENST00000395366 ANKRD18AQ8IVF6 992 aa17.22■□□□□ 0.35
PPP1CB-203ENST00000395366 NCOA7Q8NI08 942 aa17.22■□□□□ 0.35
PPP1CB-203ENST00000395366 FRMPD1Q5SYB0 1578 aa17.22■□□□□ 0.35
PPP1CB-203ENST00000395366 DIP2BQ9P265 1576 aa17.22■□□□□ 0.35
PPP1CB-203ENST00000395366 KDRP35968 1356 aa17.22■□□□□ 0.35
PPP1CB-203ENST00000395366 AK2P54819 239 aa17.22■□□□□ 0.35
PPP1CB-203ENST00000395366 ATP2B2Q01814 1243 aa17.22■□□□□ 0.35
PPP1CB-203ENST00000395366 PROSER3Q2NL68 480 aa17.22■□□□□ 0.35
PPP1CB-203ENST00000395366 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.22■□□□□ 0.35
PPP1CB-203ENST00000395366 HELBQ8NG08 1087 aaPredicted RBP17.22■□□□□ 0.35
PPP1CB-203ENST00000395366 RPGRQ92834 1020 aaKnown RBP17.22■□□□□ 0.35
PPP1CB-203ENST00000395366 RNF41Q9H4P4 317 aaPredicted RBP17.22■□□□□ 0.35
PPP1CB-203ENST00000395366 PRIM1P49642 420 aaKnown RBP17.21■□□□□ 0.35
PPP1CB-203ENST00000395366 IKQ13123 557 aaPredicted RBP17.21■□□□□ 0.35
PPP1CB-203ENST00000395366 MAP3K11Q16584 847 aa17.21■□□□□ 0.35
PPP1CB-203ENST00000395366 TFIP11Q9UBB9 837 aaKnown RBP17.21■□□□□ 0.35
PPP1CB-203ENST00000395366 RAD50Q92878 1312 aa17.21■□□□□ 0.35
PPP1CB-203ENST00000395366 RAB3GAP1Q15042 981 aa17.21■□□□□ 0.35
PPP1CB-203ENST00000395366 SLC9C2Q5TAH2 1124 aa17.21■□□□□ 0.35
PPP1CB-203ENST00000395366 CCDC171Q6TFL3 1326 aa17.21■□□□□ 0.35
PPP1CB-203ENST00000395366 USP5P45974 858 aa17.21■□□□□ 0.35
PPP1CB-203ENST00000395366 SETDB2Q96T68 719 aa17.21■□□□□ 0.35
PPP1CB-203ENST00000395366 SLC12A7Q9Y666 1083 aa17.21■□□□□ 0.35
PPP1CB-203ENST00000395366 RANBP6O60518 1105 aaKnown RBP17.21■□□□□ 0.35
PPP1CB-203ENST00000395366 ZSCAN22P10073 491 aaPredicted RBP17.21■□□□□ 0.35
PPP1CB-203ENST00000395366 CAMK4Q16566 473 aa17.21■□□□□ 0.35
PPP1CB-203ENST00000395366 CCDC183Q5T5S1 534 aa17.21■□□□□ 0.35
PPP1CB-203ENST00000395366 LRRC7Q96NW7 1537 aa17.21■□□□□ 0.35
PPP1CB-203ENST00000395366 CTDP1Q9Y5B0 961 aaPredicted RBP17.21■□□□□ 0.35
PPP1CB-203ENST00000395366 PREX1Q8TCU6 1659 aa17.2■□□□□ 0.34
PPP1CB-203ENST00000395366 SGSM2O43147 1006 aa17.2■□□□□ 0.34
PPP1CB-203ENST00000395366 PPFIA3O75145 1194 aa17.2■□□□□ 0.34
PPP1CB-203ENST00000395366 CCDC82Q8N4S0 544 aa17.2■□□□□ 0.34
PPP1CB-203ENST00000395366 IQSEC3Q9UPP2 1182 aaPredicted RBP17.2■□□□□ 0.34
PPP1CB-203ENST00000395366 CCDC196A0A1B0GTZ2 297 aa17.2■□□□□ 0.34
PPP1CB-203ENST00000395366 MPNDQ8N594 471 aa17.2■□□□□ 0.34
PPP1CB-203ENST00000395366 ADGRL3Q9HAR2 1447 aa17.2■□□□□ 0.34
PPP1CB-203ENST00000395366 SIRT2Q8IXJ6 389 aa17.2■□□□□ 0.34
PPP1CB-203ENST00000395366 A0A1B0GUL7 405 aa17.2■□□□□ 0.34
PPP1CB-203ENST00000395366 RNF113AO15541 343 aaKnown RBP17.2■□□□□ 0.34
PPP1CB-203ENST00000395366 ZNF594Q96JF6 807 aaPredicted RBP17.2■□□□□ 0.34
PPP1CB-203ENST00000395366 MCM5P33992 734 aa17.19■□□□□ 0.34
PPP1CB-203ENST00000395366 SPC24Q8NBT2 197 aa17.19■□□□□ 0.34
PPP1CB-203ENST00000395366 NLRP3Q96P20 1036 aa17.19■□□□□ 0.34
PPP1CB-203ENST00000395366 CDC42BPGQ6DT37 1551 aa17.19■□□□□ 0.34
PPP1CB-203ENST00000395366 IQCA1Q86XH1 822 aa17.19■□□□□ 0.34
PPP1CB-203ENST00000395366 PIBF1Q8WXW3 757 aa17.19■□□□□ 0.34
PPP1CB-203ENST00000395366 PTCH1Q13635 1447 aa17.19■□□□□ 0.34
PPP1CB-203ENST00000395366 NOL7Q9UMY1 257 aaKnown RBP17.19■□□□□ 0.34
PPP1CB-203ENST00000395366 ADAMTS13Q76LX8 1427 aa17.19■□□□□ 0.34
PPP1CB-203ENST00000395366 TXLNAP40222 546 aa17.19■□□□□ 0.34
PPP1CB-203ENST00000395366 USP31Q70CQ4 1352 aa17.18■□□□□ 0.34
PPP1CB-203ENST00000395366 IBTKQ9P2D0 1353 aaPredicted RBP17.18■□□□□ 0.34
PPP1CB-203ENST00000395366 PRAMEF22A3QJZ6 481 aa17.18■□□□□ 0.34
PPP1CB-203ENST00000395366 GOLGA8AA7E2F4 631 aa17.18■□□□□ 0.34
PPP1CB-203ENST00000395366 RBM5P52756 815 aaKnown RBP eCLIP17.18■□□□□ 0.34
PPP1CB-203ENST00000395366 SF3B2Q13435 895 aaKnown RBP17.18■□□□□ 0.34
PPP1CB-203ENST00000395366 Q6ZUG5 572 aa17.18■□□□□ 0.34
PPP1CB-203ENST00000395366 RAB11FIP4Q86YS3 637 aa17.18■□□□□ 0.34
PPP1CB-203ENST00000395366 FAM13BQ9NYF5 915 aa17.18■□□□□ 0.34
PPP1CB-203ENST00000395366 SMC2O95347 1197 aa17.18■□□□□ 0.34
PPP1CB-203ENST00000395366 TMEM67Q5HYA8 995 aa17.18■□□□□ 0.34
PPP1CB-203ENST00000395366 PCMTD1Q96MG8 357 aaPredicted RBP17.18■□□□□ 0.34
PPP1CB-203ENST00000395366 CPA1P15085 419 aa17.18■□□□□ 0.34
PPP1CB-203ENST00000395366 MKNK2Q9HBH9 465 aa17.18■□□□□ 0.34
PPP1CB-203ENST00000395366 NEURL4Q96JN8 1562 aa17.17■□□□□ 0.34
PPP1CB-203ENST00000395366 MICU3Q86XE3 530 aa17.17■□□□□ 0.34
PPP1CB-203ENST00000395366 INTS4Q96HW7 963 aaKnown RBP17.17■□□□□ 0.34
PPP1CB-203ENST00000395366 ORC3Q9UBD5 711 aaPredicted RBP17.17■□□□□ 0.34
PPP1CB-203ENST00000395366 MROH2AA6NES4 1674 aa17.17■□□□□ 0.34
PPP1CB-203ENST00000395366 POLR3DP05423 398 aaPredicted RBP17.17■□□□□ 0.34
PPP1CB-203ENST00000395366 MFSD6Q6ZSS7 791 aa17.17■□□□□ 0.34
PPP1CB-203ENST00000395366 HOMER1Q86YM7 354 aa17.17■□□□□ 0.34
PPP1CB-203ENST00000395366 RBM27Q9P2N5 1060 aaKnown RBP17.17■□□□□ 0.34
PPP1CB-203ENST00000395366 ITGA6P23229 1130 aa17.17■□□□□ 0.34
PPP1CB-203ENST00000395366 TTLL7Q6ZT98 887 aa17.17■□□□□ 0.34
PPP1CB-203ENST00000395366 FAM227BQ96M60 508 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms