RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 DDX60Q8IY21 1712 aaKnown RBP20.93■□□□□ 0.94
SNCA-205ENST00000394991 KIAA2012Q0VF49 1180 aa20.93■□□□□ 0.94
SNCA-205ENST00000394991 PROSER3Q2NL68 480 aa20.93■□□□□ 0.94
SNCA-205ENST00000394991 CIAPIN1Q6FI81 312 aa20.93■□□□□ 0.94
SNCA-205ENST00000394991 HHIPL1Q96JK4 782 aa20.93■□□□□ 0.94
SNCA-205ENST00000394991 UTP14AQ9BVJ6 771 aaKnown RBP20.93■□□□□ 0.94
SNCA-205ENST00000394991 SHTN1A0MZ66 631 aa20.92■□□□□ 0.94
SNCA-205ENST00000394991 CA12O43570 354 aa20.92■□□□□ 0.94
SNCA-205ENST00000394991 ANXA1P04083 346 aa20.92■□□□□ 0.94
SNCA-205ENST00000394991 BRPF1P55201 1214 aaPredicted RBP20.92■□□□□ 0.94
SNCA-205ENST00000394991 DPP8Q6V1X1 898 aaPredicted RBP20.92■□□□□ 0.94
SNCA-205ENST00000394991 TMX4Q9H1E5 349 aaPredicted RBP20.92■□□□□ 0.94
SNCA-205ENST00000394991 ZNF408Q9H9D4 720 aa20.92■□□□□ 0.94
SNCA-205ENST00000394991 PDE4DIPQ5VU43 2346 aa20.92■□□□□ 0.94
SNCA-205ENST00000394991 RAD17O75943 681 aa20.91■□□□□ 0.94
SNCA-205ENST00000394991 NEFMP07197 916 aa20.91■□□□□ 0.94
SNCA-205ENST00000394991 SP8Q8IXZ3 490 aa20.91■□□□□ 0.94
SNCA-205ENST00000394991 MPNDQ8N594 471 aa20.91■□□□□ 0.94
SNCA-205ENST00000394991 ZIC5Q96T25 663 aa20.91■□□□□ 0.94
SNCA-205ENST00000394991 YDJCA8MPS7 323 aa20.9■□□□□ 0.94
SNCA-205ENST00000394991 HCLS1P14317 486 aaPredicted RBP20.9■□□□□ 0.94
SNCA-205ENST00000394991 ZC3H15Q8WU90 426 aaKnown RBP20.9■□□□□ 0.94
SNCA-205ENST00000394991 BCL2L13Q9BXK5 485 aa20.9■□□□□ 0.94
SNCA-205ENST00000394991 BBOX1O75936 387 aa20.89■□□□□ 0.93
SNCA-205ENST00000394991 COL4A1P02462 1669 aa20.89■□□□□ 0.93
SNCA-205ENST00000394991 EIF2S2P20042 333 aaKnown RBP20.88■□□□□ 0.93
SNCA-205ENST00000394991 DLK2Q6UY11 383 aa20.88■□□□□ 0.93
SNCA-205ENST00000394991 CDC37L1Q7L3B6 337 aa20.88■□□□□ 0.93
SNCA-205ENST00000394991 NLRP10Q86W26 655 aa20.88■□□□□ 0.93
SNCA-205ENST00000394991 CNOT7Q9UIV1 285 aaKnown RBP20.88■□□□□ 0.93
SNCA-205ENST00000394991 TSPYL4Q9UJ04 414 aa20.88■□□□□ 0.93
SNCA-205ENST00000394991 TNRC18O15417 2968 aaPredicted RBP20.88■□□□□ 0.93
SNCA-205ENST00000394991 DGKZQ13574 1117 aa20.87■□□□□ 0.93
SNCA-205ENST00000394991 GRAPQ13588 217 aa20.87■□□□□ 0.93
SNCA-205ENST00000394991 TNIP1Q15025 636 aa20.87■□□□□ 0.93
SNCA-205ENST00000394991 GRAPLQ8TC17 118 aaPredicted RBP20.87■□□□□ 0.93
SNCA-205ENST00000394991 CFAP44Q96MT7 982 aa20.87■□□□□ 0.93
SNCA-205ENST00000394991 AKAP11Q9UKA4 1901 aa20.86■□□□□ 0.93
SNCA-205ENST00000394991 USP48Q86UV5 1035 aa20.86■□□□□ 0.93
SNCA-205ENST00000394991 SCN9AQ15858 1988 aa20.85■□□□□ 0.93
SNCA-205ENST00000394991 NOGQ13253 232 aa20.85■□□□□ 0.93
SNCA-205ENST00000394991 DDX46Q7L014 1031 aaKnown RBP20.85■□□□□ 0.93
SNCA-205ENST00000394991 MICALL2Q8IY33 904 aa20.85■□□□□ 0.93
SNCA-205ENST00000394991 ZBTB12Q9Y330 459 aaPredicted RBP20.85■□□□□ 0.93
SNCA-205ENST00000394991 MAPK8IP3Q9UPT6 1336 aa20.84■□□□□ 0.93
SNCA-205ENST00000394991 HUNKP57058 714 aa20.84■□□□□ 0.93
SNCA-205ENST00000394991 COPS6Q7L5N1 327 aa20.84■□□□□ 0.93
SNCA-205ENST00000394991 XAGE3Q8WTP9 111 aa20.84■□□□□ 0.93
SNCA-205ENST00000394991 H7C1D1 291 aa20.83■□□□□ 0.93
SNCA-205ENST00000394991 EGFRP00533 1210 aa20.83■□□□□ 0.93
SNCA-205ENST00000394991 AIMP1Q12904 312 aaKnown RBP20.83■□□□□ 0.93
SNCA-205ENST00000394991 HSP90AB3PQ58FF7 597 aa20.83■□□□□ 0.93
SNCA-205ENST00000394991 SAMD7Q7Z3H4 446 aa20.83■□□□□ 0.93
SNCA-205ENST00000394991 NECTIN2Q92692 538 aa20.83■□□□□ 0.93
SNCA-205ENST00000394991 TRMT112Q9UI30 125 aaKnown RBP20.83■□□□□ 0.93
SNCA-205ENST00000394991 SH3TC1Q8TE82 1336 aa20.82■□□□□ 0.92
SNCA-205ENST00000394991 FAM155AB1AL88 458 aaPredicted RBP20.82■□□□□ 0.92
SNCA-205ENST00000394991 TCIRG1Q13488 830 aa20.82■□□□□ 0.92
SNCA-205ENST00000394991 ZNF428Q96B54 188 aa20.82■□□□□ 0.92
SNCA-205ENST00000394991 PSMD14O00487 310 aa20.81■□□□□ 0.92
SNCA-205ENST00000394991 DPF2Q92785 391 aa20.81■□□□□ 0.92
SNCA-205ENST00000394991 DBNDD1Q9H9R9 158 aa20.81■□□□□ 0.92
SNCA-205ENST00000394991 TBC1D10BQ4KMP7 808 aaPredicted RBP20.8■□□□□ 0.92
SNCA-205ENST00000394991 RGMBQ6NW40 437 aa20.8■□□□□ 0.92
SNCA-205ENST00000394991 TMC4Q7Z404 712 aa20.8■□□□□ 0.92
SNCA-205ENST00000394991 PSME4Q14997 1843 aa20.79■□□□□ 0.92
SNCA-205ENST00000394991 ADM5C9JUS6 153 aa20.79■□□□□ 0.92
SNCA-205ENST00000394991 KRT26Q7Z3Y9 468 aa20.79■□□□□ 0.92
SNCA-205ENST00000394991 RTL9Q8NET4 1388 aa20.79■□□□□ 0.92
SNCA-205ENST00000394991 RIPK4P57078 832 aa20.78■□□□□ 0.92
SNCA-205ENST00000394991 KRT24Q2M2I5 525 aa20.78■□□□□ 0.92
SNCA-205ENST00000394991 WASHC4Q2M389 1173 aa20.78■□□□□ 0.92
SNCA-205ENST00000394991 CELF1Q92879 486 aaKnown RBP20.78■□□□□ 0.92
SNCA-205ENST00000394991 PNNQ9H307 717 aaKnown RBP20.78■□□□□ 0.92
SNCA-205ENST00000394991 GBA2Q9HCG7 927 aaPredicted RBP20.78■□□□□ 0.92
SNCA-205ENST00000394991 KCNQ5Q9NR82 932 aa20.78■□□□□ 0.92
SNCA-205ENST00000394991 BABAM1Q9NWV8 329 aa20.78■□□□□ 0.92
SNCA-205ENST00000394991 RIMBP2O15034 1052 aa20.77■□□□□ 0.92
SNCA-205ENST00000394991 KIF23Q02241 960 aaPredicted RBP20.77■□□□□ 0.92
SNCA-205ENST00000394991 POLLQ9UGP5 575 aa20.77■□□□□ 0.92
SNCA-205ENST00000394991 NSFL1CQ9UNZ2 370 aaKnown RBP20.77■□□□□ 0.92
SNCA-205ENST00000394991 GPSM2P81274 684 aa20.76■□□□□ 0.91
SNCA-205ENST00000394991 SAGE1Q9NXZ1 904 aa20.76■□□□□ 0.91
SNCA-205ENST00000394991 ECE2O60344 883 aa20.75■□□□□ 0.91
SNCA-205ENST00000394991 SF3B3Q15393 1217 aaKnown RBP20.75■□□□□ 0.91
SNCA-205ENST00000394991 RBM26Q5T8P6 1007 aaKnown RBP20.75■□□□□ 0.91
SNCA-205ENST00000394991 C6orf229H3BNL8 230 aa20.74■□□□□ 0.91
SNCA-205ENST00000394991 RPS12P25398 132 aaKnown RBP20.74■□□□□ 0.91
SNCA-205ENST00000394991 DOK7Q18PE1 504 aa20.74■□□□□ 0.91
SNCA-205ENST00000394991 C2orf69Q8N8R5 385 aa20.74■□□□□ 0.91
SNCA-205ENST00000394991 FAM89AQ96GI7 184 aa20.74■□□□□ 0.91
SNCA-205ENST00000394991 ISCA1Q9BUE6 129 aa20.74■□□□□ 0.91
SNCA-205ENST00000394991 CHPF2Q9P2E5 772 aa20.74■□□□□ 0.91
SNCA-205ENST00000394991 ASTN2O75129 1339 aaPredicted RBP20.74■□□□□ 0.91
SNCA-205ENST00000394991 TMPOP42166 694 aaKnown RBP20.73■□□□□ 0.91
SNCA-205ENST00000394991 ZNF157P51786 506 aaPredicted RBP20.73■□□□□ 0.91
SNCA-205ENST00000394991 SOX10P56693 466 aa20.73■□□□□ 0.91
SNCA-205ENST00000394991 CCDC102AQ96A19 550 aa20.73■□□□□ 0.91
SNCA-205ENST00000394991 DCPSQ96C86 337 aaKnown RBP20.73■□□□□ 0.91
SNCA-205ENST00000394991 RNF186Q9NXI6 227 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms