RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 LRRC24Q50LG9 513 aa20.85■□□□□ 0.93
SLC6A4-202ENST00000394821 HSP90AB4PQ58FF6 505 aa20.85■□□□□ 0.93
SLC6A4-202ENST00000394821 TRAPPC3LQ5T215 181 aa20.85■□□□□ 0.93
SLC6A4-202ENST00000394821 CLEC4GQ6UXB4 293 aa20.85■□□□□ 0.93
SLC6A4-202ENST00000394821 GREM2Q9H772 168 aa20.85■□□□□ 0.93
SLC6A4-202ENST00000394821 TNS1Q9HBL0 1735 aaKnown RBP20.85■□□□□ 0.93
SLC6A4-202ENST00000394821 ZPR1O75312 459 aa20.85■□□□□ 0.93
SLC6A4-202ENST00000394821 ZNF652Q9Y2D9 606 aa20.85■□□□□ 0.93
SLC6A4-202ENST00000394821 EAF2Q96CJ1 260 aaPredicted RBP20.84■□□□□ 0.93
SLC6A4-202ENST00000394821 MYH3P11055 1940 aa20.84■□□□□ 0.93
SLC6A4-202ENST00000394821 DDX60Q8IY21 1712 aaKnown RBP20.84■□□□□ 0.93
SLC6A4-202ENST00000394821 RFC4P35249 363 aa20.83■□□□□ 0.93
SLC6A4-202ENST00000394821 CTSWP56202 376 aa20.83■□□□□ 0.93
SLC6A4-202ENST00000394821 TFCP2Q12800 502 aa20.83■□□□□ 0.93
SLC6A4-202ENST00000394821 ATG9AQ7Z3C6 839 aa20.83■□□□□ 0.93
SLC6A4-202ENST00000394821 CCDC24Q8N4L8 307 aa20.83■□□□□ 0.93
SLC6A4-202ENST00000394821 TLR7Q9NYK1 1049 aaKnown RBP20.83■□□□□ 0.93
SLC6A4-202ENST00000394821 SH3TC1Q8TE82 1336 aa20.83■□□□□ 0.93
SLC6A4-202ENST00000394821 PLSCR1O15162 318 aa20.83■□□□□ 0.92
SLC6A4-202ENST00000394821 ZNF827Q17R98 1081 aa20.83■□□□□ 0.92
SLC6A4-202ENST00000394821 CCDC8Q9H0W5 538 aaPredicted RBP20.83■□□□□ 0.92
SLC6A4-202ENST00000394821 USP42Q9H9J4 1324 aaKnown RBP20.83■□□□□ 0.92
SLC6A4-202ENST00000394821 ERFEQ4G0M1 354 aa20.82■□□□□ 0.92
SLC6A4-202ENST00000394821 PARP10Q53GL7 1025 aa20.82■□□□□ 0.92
SLC6A4-202ENST00000394821 PDE8AO60658 829 aa20.82■□□□□ 0.92
SLC6A4-202ENST00000394821 C3orf67Q6ZVT6 689 aa20.82■□□□□ 0.92
SLC6A4-202ENST00000394821 AACSQ86V21 672 aa20.82■□□□□ 0.92
SLC6A4-202ENST00000394821 CCDC57Q2TAC2 916 aa20.81■□□□□ 0.92
SLC6A4-202ENST00000394821 ERC1Q8IUD2 1116 aa20.81■□□□□ 0.92
SLC6A4-202ENST00000394821 CLASRPQ8N2M8 674 aaKnown RBP20.81■□□□□ 0.92
SLC6A4-202ENST00000394821 ANTXR1Q9H6X2 564 aa20.81■□□□□ 0.92
SLC6A4-202ENST00000394821 TUBGCP6Q96RT7 1819 aa20.8■□□□□ 0.92
SLC6A4-202ENST00000394821 ITGA6P23229 1130 aa20.8■□□□□ 0.92
SLC6A4-202ENST00000394821 STAP2Q9UGK3 403 aa20.8■□□□□ 0.92
SLC6A4-202ENST00000394821 MAP4K4O95819 1239 aaPredicted RBP20.8■□□□□ 0.92
SLC6A4-202ENST00000394821 SLKQ9H2G2 1235 aaPredicted RBP20.8■□□□□ 0.92
SLC6A4-202ENST00000394821 COL4A1P02462 1669 aa20.79■□□□□ 0.92
SLC6A4-202ENST00000394821 PI4K2BQ8TCG2 481 aa20.79■□□□□ 0.92
SLC6A4-202ENST00000394821 IFIT5Q13325 482 aaKnown RBP20.79■□□□□ 0.92
SLC6A4-202ENST00000394821 NFKBIBQ15653 356 aa20.79■□□□□ 0.92
SLC6A4-202ENST00000394821 SEC31BQ9NQW1 1179 aa20.79■□□□□ 0.92
SLC6A4-202ENST00000394821 SETDB2Q96T68 719 aa20.78■□□□□ 0.92
SLC6A4-202ENST00000394821 ABCC12Q96J65 1359 aa20.78■□□□□ 0.92
SLC6A4-202ENST00000394821 EYA2O00167 538 aa20.78■□□□□ 0.92
SLC6A4-202ENST00000394821 CASZ1Q86V15 1759 aa20.77■□□□□ 0.92
SLC6A4-202ENST00000394821 IFIT2P09913 472 aaKnown RBP20.77■□□□□ 0.92
SLC6A4-202ENST00000394821 EN1Q05925 392 aaPredicted RBP20.77■□□□□ 0.92
SLC6A4-202ENST00000394821 USP26Q9BXU7 913 aa20.77■□□□□ 0.92
SLC6A4-202ENST00000394821 TAF1P21675 1872 aa20.77■□□□□ 0.92
SLC6A4-202ENST00000394821 GYS1P13807 737 aa20.76■□□□□ 0.91
SLC6A4-202ENST00000394821 NFIXQ14938 502 aa20.76■□□□□ 0.91
SLC6A4-202ENST00000394821 EZH2Q15910 746 aaKnown RBP20.76■□□□□ 0.91
SLC6A4-202ENST00000394821 COL24A1Q17RW2 1714 aa20.76■□□□□ 0.91
SLC6A4-202ENST00000394821 TNNI3KQ59H18 835 aa20.76■□□□□ 0.91
SLC6A4-202ENST00000394821 SNX21Q969T3 373 aa20.76■□□□□ 0.91
SLC6A4-202ENST00000394821 AKT1S1Q96B36 256 aa20.76■□□□□ 0.91
SLC6A4-202ENST00000394821 TFCP2L1Q9NZI6 479 aa20.76■□□□□ 0.91
SLC6A4-202ENST00000394821 FPGT-TNNI3KV9GXZ4 949 aa20.76■□□□□ 0.91
SLC6A4-202ENST00000394821 TAF7LQ5H9L4 462 aa20.75■□□□□ 0.91
SLC6A4-202ENST00000394821 LAMB2P55268 1798 aa20.75■□□□□ 0.91
SLC6A4-202ENST00000394821 ANKRD18BA2A2Z9 1011 aa20.75■□□□□ 0.91
SLC6A4-202ENST00000394821 SSFA2P28290 1259 aa20.75■□□□□ 0.91
SLC6A4-202ENST00000394821 TIMM10P62072 90 aa20.75■□□□□ 0.91
SLC6A4-202ENST00000394821 NBPF5PQ86XG9 351 aaPredicted RBP20.75■□□□□ 0.91
SLC6A4-202ENST00000394821 SPRYD3Q8NCJ5 442 aa20.75■□□□□ 0.91
SLC6A4-202ENST00000394821 DBNLQ9UJU6 430 aaKnown RBP20.75■□□□□ 0.91
SLC6A4-202ENST00000394821 CD2BP2O95400 341 aaKnown RBP20.74■□□□□ 0.91
SLC6A4-202ENST00000394821 ADRA2BP18089 450 aa20.74■□□□□ 0.91
SLC6A4-202ENST00000394821 CASC1Q6TDU7 716 aa20.74■□□□□ 0.91
SLC6A4-202ENST00000394821 RILPL2Q969X0 211 aa20.74■□□□□ 0.91
SLC6A4-202ENST00000394821 AOX1Q06278 1338 aa20.74■□□□□ 0.91
SLC6A4-202ENST00000394821 TRIM6-TRIM34B2RNG4 842 aa20.73■□□□□ 0.91
SLC6A4-202ENST00000394821 IL15P40933 162 aaPredicted RBP20.73■□□□□ 0.91
SLC6A4-202ENST00000394821 DBNDD2Q9BQY9 259 aa20.73■□□□□ 0.91
SLC6A4-202ENST00000394821 GTF2E1P29083 439 aaPredicted RBP20.73■□□□□ 0.91
SLC6A4-202ENST00000394821 LDHAL6AQ6ZMR3 332 aa20.73■□□□□ 0.91
SLC6A4-202ENST00000394821 ILDR1Q86SU0 546 aaPredicted RBP20.73■□□□□ 0.91
SLC6A4-202ENST00000394821 COL23A1Q86Y22 540 aaPredicted RBP20.73■□□□□ 0.91
SLC6A4-202ENST00000394821 HSCBQ8IWL3 235 aa20.73■□□□□ 0.91
SLC6A4-202ENST00000394821 RIPOR2Q9Y4F9 1068 aa20.73■□□□□ 0.91
SLC6A4-202ENST00000394821 SPEF2Q9C093 1822 aa20.73■□□□□ 0.91
SLC6A4-202ENST00000394821 RGL2O15211 777 aa20.72■□□□□ 0.91
SLC6A4-202ENST00000394821 CIAO1O76071 339 aa20.72■□□□□ 0.91
SLC6A4-202ENST00000394821 ECHDC1Q9NTX5 307 aa20.72■□□□□ 0.91
SLC6A4-202ENST00000394821 EIF5BO60841 1220 aaKnown RBP20.72■□□□□ 0.91
SLC6A4-202ENST00000394821 DEFB132Q7Z7B7 95 aa20.72■□□□□ 0.91
SLC6A4-202ENST00000394821 CAMKK2Q96RR4 588 aa20.72■□□□□ 0.91
SLC6A4-202ENST00000394821 NDUFB9Q9Y6M9 179 aa20.72■□□□□ 0.91
SLC6A4-202ENST00000394821 RIC1Q4ADV7 1423 aa20.71■□□□□ 0.91
SLC6A4-202ENST00000394821 NEUROD6Q96NK8 337 aa20.71■□□□□ 0.91
SLC6A4-202ENST00000394821 ANO8Q9HCE9 1232 aaPredicted RBP20.71■□□□□ 0.91
SLC6A4-202ENST00000394821 ERC2O15083 957 aa20.7■□□□□ 0.91
SLC6A4-202ENST00000394821 FRAT2O75474 233 aaPredicted RBP20.7■□□□□ 0.91
SLC6A4-202ENST00000394821 HELBQ8NG08 1087 aaPredicted RBP20.7■□□□□ 0.9
SLC6A4-202ENST00000394821 CNNM1Q9NRU3 951 aa20.7■□□□□ 0.9
SLC6A4-202ENST00000394821 TTC41PQ6P2S7 1318 aa20.7■□□□□ 0.9
SLC6A4-202ENST00000394821 TNRC6CQ9HCJ0 1690 aaKnown RBP20.7■□□□□ 0.9
SLC6A4-202ENST00000394821 SNAP23O00161 211 aa20.69■□□□□ 0.9
SLC6A4-202ENST00000394821 CHMLP26374 656 aa20.69■□□□□ 0.9
SLC6A4-202ENST00000394821 CCDC152Q4G0S7 254 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms