RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 DACT1Q9NYF0 836 aa11.85□□□□□ -0.51
UBE2D3-208ENST00000394803 KCNQ3O43525 872 aa11.84□□□□□ -0.51
UBE2D3-208ENST00000394803 CWF19L2Q2TBE0 894 aaKnown RBP11.84□□□□□ -0.51
UBE2D3-208ENST00000394803 NEK1Q96PY6 1258 aa11.84□□□□□ -0.51
UBE2D3-208ENST00000394803 COPRSQ9NQ92 184 aa11.84□□□□□ -0.51
UBE2D3-208ENST00000394803 PAXBP1Q9Y5B6 917 aa11.84□□□□□ -0.51
UBE2D3-208ENST00000394803 A0A0D9SFI3 127 aa11.84□□□□□ -0.51
UBE2D3-208ENST00000394803 GOLGA6L19H0YKK7 550 aa11.84□□□□□ -0.51
UBE2D3-208ENST00000394803 ANXA1P04083 346 aa11.84□□□□□ -0.51
UBE2D3-208ENST00000394803 TOB2Q14106 344 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-208ENST00000394803 TPRNQ4KMQ1 711 aa11.84□□□□□ -0.51
UBE2D3-208ENST00000394803 ANO6Q4KMQ2 910 aa11.84□□□□□ -0.51
UBE2D3-208ENST00000394803 TRIM5Q9C035 493 aa11.84□□□□□ -0.51
UBE2D3-208ENST00000394803 CCDC8Q9H0W5 538 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-208ENST00000394803 BOLA2Q9H3K6 86 aa11.84□□□□□ -0.51
UBE2D3-208ENST00000394803 ABCC6O95255 1503 aa11.83□□□□□ -0.52
UBE2D3-208ENST00000394803 TAF5LO75529 589 aa11.83□□□□□ -0.52
UBE2D3-208ENST00000394803 HSP90B1P14625 803 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-208ENST00000394803 LIG1P18858 919 aa11.83□□□□□ -0.52
UBE2D3-208ENST00000394803 UTP14CQ5TAP6 766 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-208ENST00000394803 NAA16Q6N069 864 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-208ENST00000394803 ARHGEF25Q86VW2 580 aa11.83□□□□□ -0.52
UBE2D3-208ENST00000394803 PDCL2Q8N4E4 241 aa11.83□□□□□ -0.52
UBE2D3-208ENST00000394803 SPC24Q8NBT2 197 aa11.83□□□□□ -0.52
UBE2D3-208ENST00000394803 ZNF396Q96N95 335 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-208ENST00000394803 KCNF1Q9H3M0 494 aa11.83□□□□□ -0.52
UBE2D3-208ENST00000394803 CBX8Q9HC52 389 aa11.83□□□□□ -0.52
UBE2D3-208ENST00000394803 SMTNL1A8MU46 457 aa11.83□□□□□ -0.52
UBE2D3-208ENST00000394803 ZNF165P49910 485 aa11.83□□□□□ -0.52
UBE2D3-208ENST00000394803 ZNF75DP51815 510 aa11.83□□□□□ -0.52
UBE2D3-208ENST00000394803 SARM1Q6SZW1 724 aa11.83□□□□□ -0.52
UBE2D3-208ENST00000394803 FERMT3Q86UX7 667 aa11.83□□□□□ -0.52
UBE2D3-208ENST00000394803 PLA2G4DQ86XP0 818 aa11.83□□□□□ -0.52
UBE2D3-208ENST00000394803 METTL22Q9BUU2 404 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-208ENST00000394803 NEURL1BA8MQ27 555 aa11.82□□□□□ -0.52
UBE2D3-208ENST00000394803 CTIFO43310 598 aaKnown RBP11.82□□□□□ -0.52
UBE2D3-208ENST00000394803 FGD1P98174 961 aa11.82□□□□□ -0.52
UBE2D3-208ENST00000394803 GCKRQ14397 625 aa11.82□□□□□ -0.52
UBE2D3-208ENST00000394803 STX1AQ16623 288 aa11.82□□□□□ -0.52
UBE2D3-208ENST00000394803 MCMDC2Q4G0Z9 681 aa11.82□□□□□ -0.52
UBE2D3-208ENST00000394803 ANKRD24Q8TF21 1146 aa11.82□□□□□ -0.52
UBE2D3-208ENST00000394803 FEZ1Q99689 392 aa11.82□□□□□ -0.52
UBE2D3-208ENST00000394803 PYCARDQ9ULZ3 195 aa11.82□□□□□ -0.52
UBE2D3-208ENST00000394803 PXDNQ92626 1479 aa11.82□□□□□ -0.52
UBE2D3-208ENST00000394803 ZBTB7CA1YPR0 619 aa11.82□□□□□ -0.52
UBE2D3-208ENST00000394803 RESTQ13127 1097 aa11.82□□□□□ -0.52
UBE2D3-208ENST00000394803 CAMK4Q16566 473 aa11.82□□□□□ -0.52
UBE2D3-208ENST00000394803 CCDC73Q6ZRK6 1079 aa11.82□□□□□ -0.52
UBE2D3-208ENST00000394803 LUZP1Q86V48 1076 aa11.82□□□□□ -0.52
UBE2D3-208ENST00000394803 GTPBP4Q9BZE4 634 aaKnown RBP11.82□□□□□ -0.52
UBE2D3-208ENST00000394803 GCP02774 474 aa11.81□□□□□ -0.52
UBE2D3-208ENST00000394803 PROSER3Q2NL68 480 aa11.81□□□□□ -0.52
UBE2D3-208ENST00000394803 LRRFIP1Q32MZ4 808 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-208ENST00000394803 ESCO1Q5FWF5 840 aa11.81□□□□□ -0.52
UBE2D3-208ENST00000394803 MPNDQ8N594 471 aa11.81□□□□□ -0.52
UBE2D3-208ENST00000394803 MRFAP1L1Q96HT8 127 aa11.81□□□□□ -0.52
UBE2D3-208ENST00000394803 KAZALD1Q96I82 304 aa11.81□□□□□ -0.52
UBE2D3-208ENST00000394803 NAT10Q9H0A0 1025 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-208ENST00000394803 BCL2L12Q9HB09 334 aa11.81□□□□□ -0.52
UBE2D3-208ENST00000394803 MYH15Q9Y2K3 1946 aa11.81□□□□□ -0.52
UBE2D3-208ENST00000394803 SH3TC1Q8TE82 1336 aa11.81□□□□□ -0.52
UBE2D3-208ENST00000394803 SCN11AQ9UI33 1791 aa11.81□□□□□ -0.52
UBE2D3-208ENST00000394803 KIF2AO00139 706 aaPredicted RBP11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 RIOK3O14730 519 aaKnown RBP11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 AP5Z1O43299 807 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 PTGS1P23219 599 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 TNNI3KQ59H18 835 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 CCDC186Q7Z3E2 898 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 ANKLE2Q86XL3 938 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 SMARCC2Q8TAQ2 1214 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 ANKRD7Q92527 254 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 BRF1Q92994 677 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 LRRC59Q96AG4 307 aaKnown RBP11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 SIL1Q9H173 461 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 HELLSQ9NRZ9 838 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 CLIP2Q9UDT6 1046 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 FPGT-TNNI3KV9GXZ4 949 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 SETD1BQ9UPS6 1966 aaKnown RBP11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 KIF1AQ12756 1690 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 PFKFB2O60825 505 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 AIMP1Q12904 312 aaKnown RBP11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 ZSCAN25Q6NSZ9 544 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 ZNF790Q6PG37 636 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 Q6ZUG5 572 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 CKAP2LQ8IYA6 745 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 ANO10Q9NW15 660 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 CHMP3Q9Y3E7 222 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 PALLDQ8WX93 1383 aa11.8□□□□□ -0.52
UBE2D3-208ENST00000394803 SPEF2Q9C093 1822 aa11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 KINO60870 393 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 IGKV5-2P06315 115 aa11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 STK3Q13188 491 aa11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 RABL6Q3YEC7 729 aaPredicted RBP11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 ZNF710Q8N1W2 664 aa11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 RAPGEF4Q8WZA2 1011 aa11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 HAUS7Q99871 368 aa11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 DSCC1Q9BVC3 393 aa11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 TLR7Q9NYK1 1049 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 CGNQ9P2M7 1197 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms