RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 NMIQ13287 307 aaPredicted RBP11.81□□□□□ -0.52
PSEN1-204ENST00000394164 ANKRD13DQ6ZTN6 518 aa11.81□□□□□ -0.52
PSEN1-204ENST00000394164 DNAJC2Q99543 621 aaKnown RBP11.81□□□□□ -0.52
PSEN1-204ENST00000394164 TAF6LQ9Y6J9 622 aa11.81□□□□□ -0.52
PSEN1-204ENST00000394164 RAD50Q92878 1312 aa11.81□□□□□ -0.52
PSEN1-204ENST00000394164 ALDH1L1O75891 902 aa11.81□□□□□ -0.52
PSEN1-204ENST00000394164 SLFNL1Q499Z3 407 aa11.81□□□□□ -0.52
PSEN1-204ENST00000394164 IFNL2Q8IZJ0 200 aa11.81□□□□□ -0.52
PSEN1-204ENST00000394164 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.81□□□□□ -0.52
PSEN1-204ENST00000394164 NEURL1BA8MQ27 555 aa11.81□□□□□ -0.52
PSEN1-204ENST00000394164 CCDC183Q5T5S1 534 aa11.81□□□□□ -0.52
PSEN1-204ENST00000394164 TOM1L2Q6ZVM7 507 aa11.81□□□□□ -0.52
PSEN1-204ENST00000394164 RUFY3Q7L099 469 aa11.81□□□□□ -0.52
PSEN1-204ENST00000394164 GPATCH3Q96I76 525 aa11.81□□□□□ -0.52
PSEN1-204ENST00000394164 ZFP91Q96JP5 570 aaPredicted RBP11.81□□□□□ -0.52
PSEN1-204ENST00000394164 FEZ1Q99689 392 aa11.81□□□□□ -0.52
PSEN1-204ENST00000394164 A0A087WZG4 1122 aa11.8□□□□□ -0.52
PSEN1-204ENST00000394164 PPFIA3O75145 1194 aa11.8□□□□□ -0.52
PSEN1-204ENST00000394164 STK3Q13188 491 aa11.8□□□□□ -0.52
PSEN1-204ENST00000394164 GCKRQ14397 625 aa11.8□□□□□ -0.52
PSEN1-204ENST00000394164 LARP1Q6PKG0 1096 aaKnown RBP11.8□□□□□ -0.52
PSEN1-204ENST00000394164 FAM184AQ8NB25 1140 aa11.8□□□□□ -0.52
PSEN1-204ENST00000394164 ZBTB3Q9H5J0 574 aa11.8□□□□□ -0.52
PSEN1-204ENST00000394164 UVSSAQ2YD98 709 aa11.8□□□□□ -0.52
PSEN1-204ENST00000394164 A0A0D9SFI3 127 aa11.79□□□□□ -0.52
PSEN1-204ENST00000394164 A0A0G2JS52 829 aa11.79□□□□□ -0.52
PSEN1-204ENST00000394164 ANAPC15P60006 121 aa11.79□□□□□ -0.52
PSEN1-204ENST00000394164 TFCP2Q12800 502 aa11.79□□□□□ -0.52
PSEN1-204ENST00000394164 PRDM11Q9NQV5 511 aa11.79□□□□□ -0.52
PSEN1-204ENST00000394164 NRBP1Q9UHY1 535 aa11.79□□□□□ -0.52
PSEN1-204ENST00000394164 CACNA1FO60840 1977 aa11.79□□□□□ -0.52
PSEN1-204ENST00000394164 MEGF6O75095 1541 aa11.79□□□□□ -0.52
PSEN1-204ENST00000394164 PXDNLA1KZ92 1463 aa11.79□□□□□ -0.52
PSEN1-204ENST00000394164 CTIFO43310 598 aaKnown RBP11.79□□□□□ -0.52
PSEN1-204ENST00000394164 A1BGP04217 495 aa11.79□□□□□ -0.52
PSEN1-204ENST00000394164 TNNT1P13805 278 aa11.79□□□□□ -0.52
PSEN1-204ENST00000394164 CCDC129Q6ZRS4 1044 aa11.79□□□□□ -0.52
PSEN1-204ENST00000394164 NEUROD6Q96NK8 337 aa11.79□□□□□ -0.52
PSEN1-204ENST00000394164 TRIM34Q9BYJ4 488 aa11.79□□□□□ -0.52
PSEN1-204ENST00000394164 KDM6AO15550 1401 aaPredicted RBP11.79□□□□□ -0.52
PSEN1-204ENST00000394164 VPS37CA5D8V6 355 aaPredicted RBP11.78□□□□□ -0.52
PSEN1-204ENST00000394164 MCM2P49736 904 aa11.78□□□□□ -0.52
PSEN1-204ENST00000394164 FERMT3Q86UX7 667 aa11.78□□□□□ -0.52
PSEN1-204ENST00000394164 TIGD1Q96MW7 591 aa11.78□□□□□ -0.52
PSEN1-204ENST00000394164 PDRG1Q9NUG6 133 aa11.78□□□□□ -0.52
PSEN1-204ENST00000394164 RBM8AQ9Y5S9 174 aaKnown RBP11.78□□□□□ -0.52
PSEN1-204ENST00000394164 SNRPA1P09661 255 aaKnown RBP11.78□□□□□ -0.52
PSEN1-204ENST00000394164 CUL4AQ13619 759 aa11.78□□□□□ -0.52
PSEN1-204ENST00000394164 TERF2Q15554 542 aa11.78□□□□□ -0.52
PSEN1-204ENST00000394164 CAMK4Q16566 473 aa11.78□□□□□ -0.52
PSEN1-204ENST00000394164 CCDC186Q7Z3E2 898 aa11.78□□□□□ -0.52
PSEN1-204ENST00000394164 SEC62Q99442 399 aaKnown RBP11.78□□□□□ -0.52
PSEN1-204ENST00000394164 DDX41Q9UJV9 622 aaKnown RBP11.78□□□□□ -0.52
PSEN1-204ENST00000394164 SMC3Q9UQE7 1217 aa11.78□□□□□ -0.52
PSEN1-204ENST00000394164 AOX1Q06278 1338 aa11.78□□□□□ -0.52
PSEN1-204ENST00000394164 TTLL7Q6ZT98 887 aa11.78□□□□□ -0.52
PSEN1-204ENST00000394164 DDX46Q7L014 1031 aaKnown RBP11.78□□□□□ -0.52
PSEN1-204ENST00000394164 ZNF589Q86UQ0 364 aaPredicted RBP11.78□□□□□ -0.52
PSEN1-204ENST00000394164 TAOK2Q9UL54 1235 aa11.78□□□□□ -0.52
PSEN1-204ENST00000394164 TTC41PQ6P2S7 1318 aa11.77□□□□□ -0.52
PSEN1-204ENST00000394164 TCHHQ07283 1943 aa11.77□□□□□ -0.52
PSEN1-204ENST00000394164 GABPB1Q06547 395 aaPredicted RBP11.77□□□□□ -0.52
PSEN1-204ENST00000394164 FAM173BQ6P4H8 233 aa11.77□□□□□ -0.52
PSEN1-204ENST00000394164 LMBR1LQ6UX01 489 aa11.77□□□□□ -0.52
PSEN1-204ENST00000394164 ERC1Q8IUD2 1116 aa11.77□□□□□ -0.52
PSEN1-204ENST00000394164 RUFY2Q8WXA3 655 aa11.77□□□□□ -0.52
PSEN1-204ENST00000394164 ZNF594Q96JF6 807 aaPredicted RBP11.77□□□□□ -0.52
PSEN1-204ENST00000394164 FMNL2Q96PY5 1086 aa11.77□□□□□ -0.52
PSEN1-204ENST00000394164 METTL22Q9BUU2 404 aaPredicted RBP11.77□□□□□ -0.52
PSEN1-204ENST00000394164 CCDC66A2RUB6 948 aa11.77□□□□□ -0.53
PSEN1-204ENST00000394164 CAPN2P17655 700 aa11.77□□□□□ -0.53
PSEN1-204ENST00000394164 FOSBP53539 338 aa11.77□□□□□ -0.53
PSEN1-204ENST00000394164 MTX1Q13505 466 aa11.77□□□□□ -0.53
PSEN1-204ENST00000394164 TPD52L1Q16890 204 aaPredicted RBP11.77□□□□□ -0.53
PSEN1-204ENST00000394164 CCDC112Q8NEF3 446 aa11.77□□□□□ -0.53
PSEN1-204ENST00000394164 KIF18AQ8NI77 898 aa11.77□□□□□ -0.53
PSEN1-204ENST00000394164 EVI5LQ96CN4 794 aa11.77□□□□□ -0.53
PSEN1-204ENST00000394164 LIMCH1Q9UPQ0 1083 aa11.77□□□□□ -0.53
PSEN1-204ENST00000394164 SYT1P21579 422 aa11.76□□□□□ -0.53
PSEN1-204ENST00000394164 DBNDD2Q9BQY9 259 aa11.76□□□□□ -0.53
PSEN1-204ENST00000394164 LRRC2Q9BYS8 371 aa11.76□□□□□ -0.53
PSEN1-204ENST00000394164 GJB2P29033 226 aa11.76□□□□□ -0.53
PSEN1-204ENST00000394164 LUZP1Q86V48 1076 aa11.76□□□□□ -0.53
PSEN1-204ENST00000394164 DCAF5Q96JK2 942 aa11.76□□□□□ -0.53
PSEN1-204ENST00000394164 CYP46A1Q9Y6A2 500 aa11.76□□□□□ -0.53
PSEN1-204ENST00000394164 KDM3BQ7LBC6 1761 aa11.76□□□□□ -0.53
PSEN1-204ENST00000394164 ZKSCAN1P17029 563 aaPredicted RBP11.76□□□□□ -0.53
PSEN1-204ENST00000394164 TIMM10P62072 90 aa11.76□□□□□ -0.53
PSEN1-204ENST00000394164 CREB3L3Q68CJ9 461 aa11.76□□□□□ -0.53
PSEN1-204ENST00000394164 TTC14Q96N46 770 aa11.76□□□□□ -0.53
PSEN1-204ENST00000394164 DBNLQ9UJU6 430 aaKnown RBP11.76□□□□□ -0.53
PSEN1-204ENST00000394164 CCDC171Q6TFL3 1326 aa11.75□□□□□ -0.53
PSEN1-204ENST00000394164 HEG1Q9ULI3 1381 aa11.75□□□□□ -0.53
PSEN1-204ENST00000394164 GOLGA6L6A8MZA4 724 aa11.75□□□□□ -0.53
PSEN1-204ENST00000394164 MED1Q15648 1581 aaPredicted RBP11.75□□□□□ -0.53
PSEN1-204ENST00000394164 NBPF26B4DH59 902 aa11.75□□□□□ -0.53
PSEN1-204ENST00000394164 ME3Q16798 604 aa11.75□□□□□ -0.53
PSEN1-204ENST00000394164 KMT5BQ4FZB7 885 aa11.75□□□□□ -0.53
PSEN1-204ENST00000394164 TAF7LQ5H9L4 462 aa11.75□□□□□ -0.53
PSEN1-204ENST00000394164 NBPF14Q5TI25 921 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms