RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 ELF2Q15723 593 aa13.82□□□□□ -0.2
R3HDM2-203ENST00000393811 PLEKHO1Q53GL0 409 aaPredicted RBP13.82□□□□□ -0.2
R3HDM2-203ENST00000393811 TMC6Q7Z403 805 aa13.82□□□□□ -0.2
R3HDM2-203ENST00000393811 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.82□□□□□ -0.2
R3HDM2-203ENST00000393811 KIF20BQ96Q89 1820 aa13.82□□□□□ -0.2
R3HDM2-203ENST00000393811 SFPQP23246 707 aaKnown RBP eCLIP13.82□□□□□ -0.2
R3HDM2-203ENST00000393811 SNW1Q13573 536 aaKnown RBP13.82□□□□□ -0.2
R3HDM2-203ENST00000393811 SYNE3Q6ZMZ3 975 aa13.82□□□□□ -0.2
R3HDM2-203ENST00000393811 NECTIN1Q15223 517 aa13.81□□□□□ -0.2
R3HDM2-203ENST00000393811 CCDC129Q6ZRS4 1044 aa13.81□□□□□ -0.2
R3HDM2-203ENST00000393811 EAF2Q96CJ1 260 aaPredicted RBP13.81□□□□□ -0.2
R3HDM2-203ENST00000393811 TTC21AQ8NDW8 1320 aa13.81□□□□□ -0.2
R3HDM2-203ENST00000393811 CTAGE5O15320 804 aa13.81□□□□□ -0.2
R3HDM2-203ENST00000393811 CAVIN2O95810 425 aa13.81□□□□□ -0.2
R3HDM2-203ENST00000393811 ZNF397Q8NF99 534 aaPredicted RBP13.81□□□□□ -0.2
R3HDM2-203ENST00000393811 PLEKHG3A1L390 1219 aa13.81□□□□□ -0.2
R3HDM2-203ENST00000393811 DDX46Q7L014 1031 aaKnown RBP13.81□□□□□ -0.2
R3HDM2-203ENST00000393811 ZSCAN16Q9H4T2 348 aaPredicted RBP13.81□□□□□ -0.2
R3HDM2-203ENST00000393811 BICC1Q9H694 974 aaKnown RBP13.81□□□□□ -0.2
R3HDM2-203ENST00000393811 HMG20BQ9P0W2 317 aa13.81□□□□□ -0.2
R3HDM2-203ENST00000393811 GRM8O00222 908 aa13.8□□□□□ -0.2
R3HDM2-203ENST00000393811 ARGLU1Q9NWB6 273 aaPredicted RBP13.8□□□□□ -0.2
R3HDM2-203ENST00000393811 CDC42BPGQ6DT37 1551 aa13.8□□□□□ -0.2
R3HDM2-203ENST00000393811 SLU7O95391 586 aaKnown RBP13.8□□□□□ -0.2
R3HDM2-203ENST00000393811 PSME1Q06323 249 aa13.8□□□□□ -0.2
R3HDM2-203ENST00000393811 CCDC144BQ3MJ40 725 aa13.8□□□□□ -0.2
R3HDM2-203ENST00000393811 CCDC144CPQ8IYA2 1237 aa13.8□□□□□ -0.2
R3HDM2-203ENST00000393811 MAP4K1Q92918 833 aa13.8□□□□□ -0.2
R3HDM2-203ENST00000393811 LRRC8AQ8IWT6 810 aa13.8□□□□□ -0.2
R3HDM2-203ENST00000393811 TDRD7Q8NHU6 1098 aaKnown RBP13.8□□□□□ -0.2
R3HDM2-203ENST00000393811 TLR7Q9NYK1 1049 aaKnown RBP13.8□□□□□ -0.2
R3HDM2-203ENST00000393811 POLR3DP05423 398 aaPredicted RBP13.79□□□□□ -0.2
R3HDM2-203ENST00000393811 EIF4A1P60842 406 aaKnown RBP13.79□□□□□ -0.2
R3HDM2-203ENST00000393811 KSR2Q6VAB6 950 aa13.79□□□□□ -0.2
R3HDM2-203ENST00000393811 CHST3Q7LGC8 479 aa13.79□□□□□ -0.2
R3HDM2-203ENST00000393811 FTOQ9C0B1 505 aaKnown RBP eCLIP13.79□□□□□ -0.2
R3HDM2-203ENST00000393811 ELP1O95163 1332 aa13.79□□□□□ -0.2
R3HDM2-203ENST00000393811 C11orf57Q6ZUT1 292 aaPredicted RBP13.79□□□□□ -0.2
R3HDM2-203ENST00000393811 PDILTQ8N807 584 aa13.79□□□□□ -0.2
R3HDM2-203ENST00000393811 UBXN4Q92575 508 aa13.79□□□□□ -0.2
R3HDM2-203ENST00000393811 IGSF1Q8N6C5 1336 aa13.79□□□□□ -0.2
R3HDM2-203ENST00000393811 POLR3GO15318 223 aaPredicted RBP13.79□□□□□ -0.2
R3HDM2-203ENST00000393811 SERPINC1P01008 464 aa13.79□□□□□ -0.2
R3HDM2-203ENST00000393811 SYT10Q6XYQ8 523 aa13.79□□□□□ -0.2
R3HDM2-203ENST00000393811 ANKRD7Q92527 254 aa13.79□□□□□ -0.2
R3HDM2-203ENST00000393811 MYD88Q99836 296 aa13.79□□□□□ -0.2
R3HDM2-203ENST00000393811 ZNF330Q9Y3S2 320 aaPredicted RBP13.79□□□□□ -0.2
R3HDM2-203ENST00000393811 APOBRQ0VD83 1088 aa13.78□□□□□ -0.2
R3HDM2-203ENST00000393811 TEX35Q5T0J7 233 aa13.78□□□□□ -0.2
R3HDM2-203ENST00000393811 TAF3Q5VWG9 929 aa13.78□□□□□ -0.2
R3HDM2-203ENST00000393811 RAB11FIP4Q86YS3 637 aa13.78□□□□□ -0.2
R3HDM2-203ENST00000393811 RBM33Q96EV2 1170 aaKnown RBP13.78□□□□□ -0.2
R3HDM2-203ENST00000393811 SUCLG2Q96I99 432 aa13.78□□□□□ -0.2
R3HDM2-203ENST00000393811 PGBD1Q96JS3 809 aa13.78□□□□□ -0.2
R3HDM2-203ENST00000393811 ALDH1L1O75891 902 aa13.78□□□□□ -0.2
R3HDM2-203ENST00000393811 URI1O94763 535 aaPredicted RBP13.78□□□□□ -0.2
R3HDM2-203ENST00000393811 ZNF589Q86UQ0 364 aaPredicted RBP13.78□□□□□ -0.2
R3HDM2-203ENST00000393811 LRRC59Q96AG4 307 aaKnown RBP13.78□□□□□ -0.2
R3HDM2-203ENST00000393811 ROBO2Q9HCK4 1378 aa13.78□□□□□ -0.2
R3HDM2-203ENST00000393811 U3KPZ7 1027 aaPredicted RBP13.78□□□□□ -0.2
R3HDM2-203ENST00000393811 GSDMDP57764 484 aa13.78□□□□□ -0.2
R3HDM2-203ENST00000393811 WASHC4Q2M389 1173 aa13.78□□□□□ -0.2
R3HDM2-203ENST00000393811 GTF3C6Q969F1 213 aa13.78□□□□□ -0.2
R3HDM2-203ENST00000393811 A0A1B0GVL5 298 aa13.77□□□□□ -0.2
R3HDM2-203ENST00000393811 USP27XA6NNY8 438 aa13.77□□□□□ -0.2
R3HDM2-203ENST00000393811 KIF2AO00139 706 aaPredicted RBP13.77□□□□□ -0.2
R3HDM2-203ENST00000393811 BBXQ8WY36 941 aaPredicted RBP13.77□□□□□ -0.2
R3HDM2-203ENST00000393811 TMX1Q9H3N1 280 aa13.77□□□□□ -0.2
R3HDM2-203ENST00000393811 NCOA5Q9HCD5 579 aaKnown RBP13.77□□□□□ -0.2
R3HDM2-203ENST00000393811 ANKRD26Q9UPS8 1709 aa13.77□□□□□ -0.21
R3HDM2-203ENST00000393811 CTNNA3Q9UI47 895 aa13.77□□□□□ -0.21
R3HDM2-203ENST00000393811 PTPDC1A2A3K4 754 aa13.77□□□□□ -0.21
R3HDM2-203ENST00000393811 TNNT3P45378 269 aaPredicted RBP13.77□□□□□ -0.21
R3HDM2-203ENST00000393811 GABPB1Q06547 395 aaPredicted RBP13.77□□□□□ -0.21
R3HDM2-203ENST00000393811 IFNKQ9P0W0 207 aa13.77□□□□□ -0.21
R3HDM2-203ENST00000393811 TAF6LQ9Y6J9 622 aa13.77□□□□□ -0.21
R3HDM2-203ENST00000393811 CTIFO43310 598 aaKnown RBP13.76□□□□□ -0.21
R3HDM2-203ENST00000393811 PROSER3Q2NL68 480 aa13.76□□□□□ -0.21
R3HDM2-203ENST00000393811 ERO1AQ96HE7 468 aa13.76□□□□□ -0.21
R3HDM2-203ENST00000393811 SEC62Q99442 399 aaKnown RBP13.76□□□□□ -0.21
R3HDM2-203ENST00000393811 DNAI1Q9UI46 699 aa13.76□□□□□ -0.21
R3HDM2-203ENST00000393811 NEO1Q92859 1461 aa13.76□□□□□ -0.21
R3HDM2-203ENST00000393811 USP6P35125 1406 aa13.76□□□□□ -0.21
R3HDM2-203ENST00000393811 LMOD1P29536 600 aaPredicted RBP13.76□□□□□ -0.21
R3HDM2-203ENST00000393811 PIP4K2AP48426 406 aaPredicted RBP13.76□□□□□ -0.21
R3HDM2-203ENST00000393811 CEBPAP49715 358 aaPredicted RBP13.76□□□□□ -0.21
R3HDM2-203ENST00000393811 CFAP100Q494V2 611 aa13.76□□□□□ -0.21
R3HDM2-203ENST00000393811 LINS1Q8NG48 757 aa13.76□□□□□ -0.21
R3HDM2-203ENST00000393811 NOL10Q9BSC4 688 aaKnown RBP13.76□□□□□ -0.21
R3HDM2-203ENST00000393811 TMCO3Q6UWJ1 677 aa13.76□□□□□ -0.21
R3HDM2-203ENST00000393811 PLA2G4DQ86XP0 818 aa13.76□□□□□ -0.21
R3HDM2-203ENST00000393811 SIGLEC1Q9BZZ2 1709 aa13.76□□□□□ -0.21
R3HDM2-203ENST00000393811 DLG5Q8TDM6 1919 aa13.75□□□□□ -0.21
R3HDM2-203ENST00000393811 GOLIM4O00461 696 aa13.75□□□□□ -0.21
R3HDM2-203ENST00000393811 SLC3A2P08195 630 aaKnown RBP13.75□□□□□ -0.21
R3HDM2-203ENST00000393811 ST3GAL1Q11201 340 aa13.75□□□□□ -0.21
R3HDM2-203ENST00000393811 BMS1Q14692 1282 aaKnown RBP13.75□□□□□ -0.21
R3HDM2-203ENST00000393811 STK11IPQ8N1F8 1099 aa13.75□□□□□ -0.21
R3HDM2-203ENST00000393811 A2ML1A8K2U0 1454 aa13.75□□□□□ -0.21
R3HDM2-203ENST00000393811 CSB-PGBD3P0DP91 1061 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms