RNA–Protein interactions for RNA: ENST00000393743.7

DDX60-201, Transcript of DExD/H-box helicase 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX60, Length 6,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-201ENST00000393743 SYCP3Q8IZU3 236 aa8.26□□□□□ -1.09
DDX60-201ENST00000393743 THUMPD2Q9BTF0 503 aaKnown RBP8.26□□□□□ -1.09
DDX60-201ENST00000393743 MTIF2P46199 727 aaKnown RBP8.26□□□□□ -1.09
DDX60-201ENST00000393743 PARP10Q53GL7 1025 aa8.26□□□□□ -1.09
DDX60-201ENST00000393743 CCDC102BQ68D86 513 aa8.26□□□□□ -1.09
DDX60-201ENST00000393743 TAX1BP1Q86VP1 789 aa8.26□□□□□ -1.09
DDX60-201ENST00000393743 MAST3O60307 1309 aa8.26□□□□□ -1.09
DDX60-201ENST00000393743 PCDH11XQ9BZA7 1347 aa8.26□□□□□ -1.09
DDX60-201ENST00000393743 PCDH11YQ9BZA8 1340 aa8.26□□□□□ -1.09
DDX60-201ENST00000393743 LMOD1P29536 600 aaPredicted RBP8.26□□□□□ -1.09
DDX60-201ENST00000393743 NAA16Q6N069 864 aaPredicted RBP8.26□□□□□ -1.09
DDX60-201ENST00000393743 LINS1Q8NG48 757 aa8.26□□□□□ -1.09
DDX60-201ENST00000393743 TNPO1Q92973 898 aaKnown RBP8.26□□□□□ -1.09
DDX60-201ENST00000393743 ORC3Q9UBD5 711 aaPredicted RBP8.26□□□□□ -1.09
DDX60-201ENST00000393743 CTNNA2P26232 953 aa8.26□□□□□ -1.09
DDX60-201ENST00000393743 PDE6BP35913 854 aa8.26□□□□□ -1.09
DDX60-201ENST00000393743 FILIP1Q7Z7B0 1213 aa8.26□□□□□ -1.09
DDX60-201ENST00000393743 LUZP1Q86V48 1076 aa8.26□□□□□ -1.09
DDX60-201ENST00000393743 GLT8D2Q9H1C3 349 aa8.25□□□□□ -1.09
DDX60-201ENST00000393743 C6orf50Q9HD87 102 aa8.25□□□□□ -1.09
DDX60-201ENST00000393743 CTAGE1Q96RT6 745 aa8.25□□□□□ -1.09
DDX60-201ENST00000393743 STX1AQ16623 288 aa8.25□□□□□ -1.09
DDX60-201ENST00000393743 SAMM50Q9Y512 469 aa8.25□□□□□ -1.09
DDX60-201ENST00000393743 SHANK2Q9UPX8 1470 aa8.25□□□□□ -1.09
DDX60-201ENST00000393743 GSTTP1A0A1W2PQM5 241 aa8.25□□□□□ -1.09
DDX60-201ENST00000393743 GRM8O00222 908 aa8.25□□□□□ -1.09
DDX60-201ENST00000393743 KRT13P13646 458 aa8.25□□□□□ -1.09
DDX60-201ENST00000393743 CYP7A1P22680 504 aa8.25□□□□□ -1.09
DDX60-201ENST00000393743 SMC1AQ14683 1233 aaKnown RBP8.25□□□□□ -1.09
DDX60-201ENST00000393743 TBC1D5Q92609 795 aa8.25□□□□□ -1.09
DDX60-201ENST00000393743 TTC41PQ6P2S7 1318 aa8.25□□□□□ -1.09
DDX60-201ENST00000393743 GPATCH8Q9UKJ3 1502 aaKnown RBP8.25□□□□□ -1.09
DDX60-201ENST00000393743 TTC6Q86TZ1 520 aa8.25□□□□□ -1.09
DDX60-201ENST00000393743 MSANTD4Q8NCY6 345 aa8.25□□□□□ -1.09
DDX60-201ENST00000393743 RHPN1Q8TCX5 695 aa8.25□□□□□ -1.09
DDX60-201ENST00000393743 MBIPQ9NS73 344 aa8.25□□□□□ -1.09
DDX60-201ENST00000393743 STK32BQ9NY57 414 aa8.25□□□□□ -1.09
DDX60-201ENST00000393743 ABCA5Q8WWZ7 1642 aa8.25□□□□□ -1.09
DDX60-201ENST00000393743 ZBTB43O43298 467 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 TDRD12Q587J7 1177 aaKnown RBP8.24□□□□□ -1.09
DDX60-201ENST00000393743 KIF18AQ8NI77 898 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 IMPG2Q9BZV3 1241 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 NIP7Q9Y221 180 aaKnown RBP eCLIP8.24□□□□□ -1.09
DDX60-201ENST00000393743 STK24Q9Y6E0 443 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 F6X3S4 739 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 SUPT20HQ8NEM7 779 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 KCNG4Q8TDN1 519 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 RBM17Q96I25 401 aaKnown RBP8.24□□□□□ -1.09
DDX60-201ENST00000393743 SSX2IPQ9Y2D8 614 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 RAD50Q92878 1312 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 TRIM27P14373 513 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 IDEP14735 1019 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 PPP1R2P41236 205 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 HDAC1Q13547 482 aaPredicted RBP8.24□□□□□ -1.09
DDX60-201ENST00000393743 IFIT1BQ5T764 474 aaKnown RBP8.24□□□□□ -1.09
DDX60-201ENST00000393743 TSNARE1Q96NA8 513 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 EXOC1Q9NV70 894 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 PTPN14Q15678 1187 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 SKIDA1Q1XH10 827 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 GRIPAP1Q4V328 841 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 FSIP1Q8NA03 581 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 SREK1Q8WXA9 508 aaKnown RBP8.24□□□□□ -1.09
DDX60-201ENST00000393743 BBXQ8WY36 941 aaPredicted RBP8.24□□□□□ -1.09
DDX60-201ENST00000393743 EIF2AK4Q9P2K8 1649 aaKnown RBP8.24□□□□□ -1.09
DDX60-201ENST00000393743 TUBB4AP04350 444 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 HOXB7P09629 217 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 DZIP3Q86Y13 1208 aaKnown RBP8.24□□□□□ -1.09
DDX60-201ENST00000393743 XAGE3Q8WTP9 111 aa8.24□□□□□ -1.09
DDX60-201ENST00000393743 NUP88Q99567 741 aaPredicted RBP8.24□□□□□ -1.09
DDX60-201ENST00000393743 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.24□□□□□ -1.09
DDX60-201ENST00000393743 UVSSAQ2YD98 709 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 BRDTQ58F21 947 aaPredicted RBP8.23□□□□□ -1.09
DDX60-201ENST00000393743 STX8Q9UNK0 236 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 WDR62O43379 1518 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 KIAA0556O60303 1618 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 CCDC171Q6TFL3 1326 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 DKC1O60832 514 aaKnown RBP eCLIP8.23□□□□□ -1.09
DDX60-201ENST00000393743 GNA11P29992 359 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 RTN1Q16799 776 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 MCMDC2Q4G0Z9 681 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 SMARCC2Q8TAQ2 1214 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 MAPKBP1O60336 1514 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 ZNF608Q9ULD9 1512 aaPredicted RBP8.23□□□□□ -1.09
DDX60-201ENST00000393743 CHMP4BP1P59074 171 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 KIF4BQ2VIQ3 1234 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 KLHL10Q6JEL2 608 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 FERMT3Q86UX7 667 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 BICD1Q96G01 975 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 ZNF219Q9P2Y4 722 aaPredicted RBP8.23□□□□□ -1.09
DDX60-201ENST00000393743 SAMD9Q5K651 1589 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 ATP5J2-PTCD1G3V325 749 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 CHRNA2Q15822 529 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 TTC22Q5TAA0 569 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 TCERG1LQ5VWI1 586 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 TMCO3Q6UWJ1 677 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 DYDC1Q8WWB3 177 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 CENPHQ9H3R5 247 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 CLEC11AQ9Y240 323 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 SLC4A4Q9Y6R1 1079 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 ATP8B2P98198 1209 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms