RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 GOLGA2Q08379 1002 aa13.28□□□□□ -0.28
LAMB1-203ENST00000393560 RASA3Q14644 834 aa13.28□□□□□ -0.28
LAMB1-203ENST00000393560 TMCO3Q6UWJ1 677 aa13.28□□□□□ -0.28
LAMB1-203ENST00000393560 SCAF11Q99590 1463 aaKnown RBP13.28□□□□□ -0.28
LAMB1-203ENST00000393560 PTGS1P23219 599 aa13.28□□□□□ -0.28
LAMB1-203ENST00000393560 TPP2P29144 1249 aaPredicted RBP13.28□□□□□ -0.28
LAMB1-203ENST00000393560 ZCRB1Q8TBF4 217 aaKnown RBP13.28□□□□□ -0.28
LAMB1-203ENST00000393560 SLX1AQ9BQ83 275 aa13.28□□□□□ -0.28
LAMB1-203ENST00000393560 PSD3Q9NYI0 1048 aa13.28□□□□□ -0.28
LAMB1-203ENST00000393560 RTN2O75298 545 aa13.27□□□□□ -0.28
LAMB1-203ENST00000393560 LIG3P49916 1009 aa13.27□□□□□ -0.28
LAMB1-203ENST00000393560 ICA1Q05084 483 aa13.27□□□□□ -0.28
LAMB1-203ENST00000393560 NEXNQ0ZGT2 675 aa13.27□□□□□ -0.28
LAMB1-203ENST00000393560 SMC1AQ14683 1233 aaKnown RBP13.27□□□□□ -0.28
LAMB1-203ENST00000393560 CCDC178Q5BJE1 867 aa13.27□□□□□ -0.28
LAMB1-203ENST00000393560 SUN2Q9UH99 717 aa13.27□□□□□ -0.28
LAMB1-203ENST00000393560 RNF20Q5VTR2 975 aa13.27□□□□□ -0.29
LAMB1-203ENST00000393560 PLEKHG4BQ96PX9 1271 aa13.27□□□□□ -0.29
LAMB1-203ENST00000393560 MMTAG2Q9BU76 263 aaKnown RBP13.27□□□□□ -0.29
LAMB1-203ENST00000393560 TMX4Q9H1E5 349 aaPredicted RBP13.27□□□□□ -0.29
LAMB1-203ENST00000393560 SLU7O95391 586 aaKnown RBP13.26□□□□□ -0.29
LAMB1-203ENST00000393560 IMPDH2P12268 514 aa13.26□□□□□ -0.29
LAMB1-203ENST00000393560 RDXP35241 583 aaKnown RBP13.26□□□□□ -0.29
LAMB1-203ENST00000393560 FOXD4Q12950 439 aaPredicted RBP13.26□□□□□ -0.29
LAMB1-203ENST00000393560 ERC1Q8IUD2 1116 aa13.26□□□□□ -0.29
LAMB1-203ENST00000393560 NME8Q8N427 588 aa13.26□□□□□ -0.29
LAMB1-203ENST00000393560 TBC1D5Q92609 795 aa13.26□□□□□ -0.29
LAMB1-203ENST00000393560 BICD1Q96G01 975 aa13.26□□□□□ -0.29
LAMB1-203ENST00000393560 PLEKHA4Q9H4M7 779 aa13.26□□□□□ -0.29
LAMB1-203ENST00000393560 ODF2LQ9ULJ1 636 aa13.26□□□□□ -0.29
LAMB1-203ENST00000393560 MTMR7Q9Y216 660 aa13.26□□□□□ -0.29
LAMB1-203ENST00000393560 SEC31AO94979 1220 aaKnown RBP13.26□□□□□ -0.29
LAMB1-203ENST00000393560 ZRANB2O95218 330 aaKnown RBP eCLIP13.26□□□□□ -0.29
LAMB1-203ENST00000393560 FMNL1O95466 1100 aaPredicted RBP13.26□□□□□ -0.29
LAMB1-203ENST00000393560 GPTP24298 496 aa13.26□□□□□ -0.29
LAMB1-203ENST00000393560 RANBP1P43487 201 aa13.26□□□□□ -0.29
LAMB1-203ENST00000393560 ATP2B2Q01814 1243 aa13.26□□□□□ -0.29
LAMB1-203ENST00000393560 LRMPQ12912 555 aa13.26□□□□□ -0.29
LAMB1-203ENST00000393560 LAMC1P11047 1609 aa13.26□□□□□ -0.29
LAMB1-203ENST00000393560 HCLS1P14317 486 aaPredicted RBP13.26□□□□□ -0.29
LAMB1-203ENST00000393560 RAB27AP51159 221 aa13.26□□□□□ -0.29
LAMB1-203ENST00000393560 KIRREL3Q8IZU9 778 aa13.26□□□□□ -0.29
LAMB1-203ENST00000393560 SIGLEC1Q9BZZ2 1709 aa13.25□□□□□ -0.29
LAMB1-203ENST00000393560 CAMSAP1Q5T5Y3 1602 aa13.25□□□□□ -0.29
LAMB1-203ENST00000393560 CHMLP26374 656 aa13.25□□□□□ -0.29
LAMB1-203ENST00000393560 CCDC30Q5VVM6 783 aa13.25□□□□□ -0.29
LAMB1-203ENST00000393560 DZIP3Q86Y13 1208 aaKnown RBP13.25□□□□□ -0.29
LAMB1-203ENST00000393560 TRIM42Q8IWZ5 723 aa13.25□□□□□ -0.29
LAMB1-203ENST00000393560 RBM42Q9BTD8 480 aaKnown RBP13.25□□□□□ -0.29
LAMB1-203ENST00000393560 MBD3O95983 291 aa13.25□□□□□ -0.29
LAMB1-203ENST00000393560 RLBP1P12271 317 aa13.25□□□□□ -0.29
LAMB1-203ENST00000393560 SAFB2Q14151 953 aaKnown RBP eCLIP13.25□□□□□ -0.29
LAMB1-203ENST00000393560 INF2Q27J81 1249 aa13.25□□□□□ -0.29
LAMB1-203ENST00000393560 UBXN6Q9BZV1 441 aa13.25□□□□□ -0.29
LAMB1-203ENST00000393560 ENO4A6NNW6 628 aa13.24□□□□□ -0.29
LAMB1-203ENST00000393560 ZSCAN9O15535 394 aaPredicted RBP13.24□□□□□ -0.29
LAMB1-203ENST00000393560 A1CFQ9NQ94 594 aaKnown RBP13.24□□□□□ -0.29
LAMB1-203ENST00000393560 SMAPO00193 183 aa13.24□□□□□ -0.29
LAMB1-203ENST00000393560 CLNS1AP54105 237 aaKnown RBP13.24□□□□□ -0.29
LAMB1-203ENST00000393560 SKIDA1Q1XH10 827 aa13.24□□□□□ -0.29
LAMB1-203ENST00000393560 ARHGAP29Q52LW3 1261 aa13.24□□□□□ -0.29
LAMB1-203ENST00000393560 STAG3Q9UJ98 1225 aa13.24□□□□□ -0.29
LAMB1-203ENST00000393560 ADGRB3O60242 1522 aa13.24□□□□□ -0.29
LAMB1-203ENST00000393560 BLMP54132 1417 aaPredicted RBP13.23□□□□□ -0.29
LAMB1-203ENST00000393560 MCM6Q14566 821 aa13.23□□□□□ -0.29
LAMB1-203ENST00000393560 RIPOR2Q9Y4F9 1068 aa13.23□□□□□ -0.29
LAMB1-203ENST00000393560 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.23□□□□□ -0.29
LAMB1-203ENST00000393560 MYOM2P54296 1465 aa13.23□□□□□ -0.29
LAMB1-203ENST00000393560 ZMYM3Q14202 1370 aa13.23□□□□□ -0.29
LAMB1-203ENST00000393560 PRPHP41219 470 aa13.23□□□□□ -0.29
LAMB1-203ENST00000393560 ZBED6P86452 979 aa13.23□□□□□ -0.29
LAMB1-203ENST00000393560 SPDYE1Q8NFV5 336 aaPredicted RBP13.23□□□□□ -0.29
LAMB1-203ENST00000393560 C14orf93Q9H972 538 aaKnown RBP13.23□□□□□ -0.29
LAMB1-203ENST00000393560 IQGAP1P46940 1657 aa13.23□□□□□ -0.29
LAMB1-203ENST00000393560 AP5Z1O43299 807 aa13.22□□□□□ -0.29
LAMB1-203ENST00000393560 ALDH1B1P30837 517 aa13.22□□□□□ -0.29
LAMB1-203ENST00000393560 CCDC181Q5TID7 509 aa13.22□□□□□ -0.29
LAMB1-203ENST00000393560 C16orf87Q6PH81 154 aa13.22□□□□□ -0.29
LAMB1-203ENST00000393560 CD248Q9HCU0 757 aa13.22□□□□□ -0.29
LAMB1-203ENST00000393560 ARGLU1Q9NWB6 273 aaPredicted RBP13.22□□□□□ -0.29
LAMB1-203ENST00000393560 SYNMO15061 1565 aa13.22□□□□□ -0.29
LAMB1-203ENST00000393560 ANKRD36BQ8N2N9 1353 aa13.22□□□□□ -0.29
LAMB1-203ENST00000393560 CASTP20810 708 aaKnown RBP13.22□□□□□ -0.29
LAMB1-203ENST00000393560 MAGEA10P43363 369 aaPredicted RBP13.22□□□□□ -0.29
LAMB1-203ENST00000393560 KIAA0825Q8IV33 1275 aa13.22□□□□□ -0.29
LAMB1-203ENST00000393560 RBM12BQ8IXT5 1001 aaKnown RBP13.22□□□□□ -0.29
LAMB1-203ENST00000393560 SYAP1Q96A49 352 aaPredicted RBP13.22□□□□□ -0.29
LAMB1-203ENST00000393560 IQCGQ9H095 443 aaKnown RBP13.22□□□□□ -0.29
LAMB1-203ENST00000393560 MKRN1Q9UHC7 482 aaKnown RBP13.22□□□□□ -0.29
LAMB1-203ENST00000393560 A0A1B0GUA9 196 aa13.21□□□□□ -0.29
LAMB1-203ENST00000393560 SASH3O75995 380 aa13.21□□□□□ -0.29
LAMB1-203ENST00000393560 MYL1P05976 194 aa13.21□□□□□ -0.29
LAMB1-203ENST00000393560 TDRD7Q8NHU6 1098 aaKnown RBP13.21□□□□□ -0.29
LAMB1-203ENST00000393560 CLIP2Q9UDT6 1046 aa13.21□□□□□ -0.29
LAMB1-203ENST00000393560 CYP2E1P05181 493 aaPredicted RBP13.21□□□□□ -0.29
LAMB1-203ENST00000393560 EIF5P55010 431 aaKnown RBP13.21□□□□□ -0.29
LAMB1-203ENST00000393560 EZH1Q92800 747 aaPredicted RBP13.21□□□□□ -0.29
LAMB1-203ENST00000393560 SLFN5Q08AF3 891 aa13.21□□□□□ -0.3
LAMB1-203ENST00000393560 CDC37L1Q7L3B6 337 aa13.21□□□□□ -0.3
LAMB1-203ENST00000393560 SPATA21Q7Z572 469 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms