RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 IL15P40933 162 aaPredicted RBP10.56□□□□□ -0.72
TDP1-203ENST00000393454 LRRC24Q50LG9 513 aa10.56□□□□□ -0.72
TDP1-203ENST00000393454 TNNI3KQ59H18 835 aa10.56□□□□□ -0.72
TDP1-203ENST00000393454 USPL1Q5W0Q7 1092 aa10.56□□□□□ -0.72
TDP1-203ENST00000393454 TTLL11Q8NHH1 800 aa10.56□□□□□ -0.72
TDP1-203ENST00000393454 TLR7Q9NYK1 1049 aaKnown RBP10.56□□□□□ -0.72
TDP1-203ENST00000393454 DAXXQ9UER7 740 aaPredicted RBP10.56□□□□□ -0.72
TDP1-203ENST00000393454 FPGT-TNNI3KV9GXZ4 949 aa10.56□□□□□ -0.72
TDP1-203ENST00000393454 TAF1LQ8IZX4 1826 aa10.56□□□□□ -0.72
TDP1-203ENST00000393454 USP42Q9H9J4 1324 aaKnown RBP10.55□□□□□ -0.72
TDP1-203ENST00000393454 MYH3P11055 1940 aa10.55□□□□□ -0.72
TDP1-203ENST00000393454 ANKRD18BA2A2Z9 1011 aa10.55□□□□□ -0.72
TDP1-203ENST00000393454 MSH5O43196 834 aa10.55□□□□□ -0.72
TDP1-203ENST00000393454 ATG9AQ7Z3C6 839 aa10.55□□□□□ -0.72
TDP1-203ENST00000393454 CNTROBQ8N137 903 aa10.55□□□□□ -0.72
TDP1-203ENST00000393454 NEUROD6Q96NK8 337 aa10.55□□□□□ -0.72
TDP1-203ENST00000393454 PUS3Q9BZE2 481 aaKnown RBP10.55□□□□□ -0.72
TDP1-203ENST00000393454 GREM2Q9H772 168 aa10.55□□□□□ -0.72
TDP1-203ENST00000393454 SRP68Q9UHB9 627 aaKnown RBP10.55□□□□□ -0.72
TDP1-203ENST00000393454 NARFQ9UHQ1 456 aa10.55□□□□□ -0.72
TDP1-203ENST00000393454 AK9Q5TCS8 1911 aa10.55□□□□□ -0.72
TDP1-203ENST00000393454 BCORQ6W2J9 1755 aa10.55□□□□□ -0.72
TDP1-203ENST00000393454 CIAO1O76071 339 aa10.54□□□□□ -0.72
TDP1-203ENST00000393454 ITGA6P23229 1130 aa10.54□□□□□ -0.72
TDP1-203ENST00000393454 TRAPPC3LQ5T215 181 aa10.54□□□□□ -0.72
TDP1-203ENST00000393454 ARHGEF1Q92888 912 aaKnown RBP10.54□□□□□ -0.72
TDP1-203ENST00000393454 LRRC4BQ9NT99 713 aa10.54□□□□□ -0.72
TDP1-203ENST00000393454 TUBGCP6Q96RT7 1819 aa10.54□□□□□ -0.72
TDP1-203ENST00000393454 C4BP0C0L5 1744 aa10.54□□□□□ -0.72
TDP1-203ENST00000393454 NTSR2O95665 410 aa10.54□□□□□ -0.72
TDP1-203ENST00000393454 HSP90B1P14625 803 aaKnown RBP10.54□□□□□ -0.72
TDP1-203ENST00000393454 GTF2E1P29083 439 aaPredicted RBP10.54□□□□□ -0.72
TDP1-203ENST00000393454 RFC4P35249 363 aa10.54□□□□□ -0.72
TDP1-203ENST00000393454 CEP126Q9P2H0 1117 aa10.54□□□□□ -0.72
TDP1-203ENST00000393454 CHMLP26374 656 aa10.53□□□□□ -0.72
TDP1-203ENST00000393454 SLC27A3Q5K4L6 730 aa10.53□□□□□ -0.72
TDP1-203ENST00000393454 TBC1D9BQ66K14 1250 aa10.53□□□□□ -0.72
TDP1-203ENST00000393454 LDHAL6AQ6ZMR3 332 aa10.53□□□□□ -0.72
TDP1-203ENST00000393454 ERICH6Q7L0X2 663 aa10.53□□□□□ -0.72
TDP1-203ENST00000393454 CNNM1Q9NRU3 951 aa10.53□□□□□ -0.72
TDP1-203ENST00000393454 AMIGO3Q86WK7 504 aa10.53□□□□□ -0.72
TDP1-203ENST00000393454 SETDB2Q96T68 719 aa10.53□□□□□ -0.72
TDP1-203ENST00000393454 DBNDD2Q9BQY9 259 aa10.53□□□□□ -0.72
TDP1-203ENST00000393454 BOLA2Q9H3K6 86 aa10.53□□□□□ -0.72
TDP1-203ENST00000393454 BCL2L12Q9HB09 334 aa10.53□□□□□ -0.72
TDP1-203ENST00000393454 DBNLQ9UJU6 430 aaKnown RBP10.53□□□□□ -0.72
TDP1-203ENST00000393454 FBXO3Q9UK99 471 aa10.53□□□□□ -0.72
TDP1-203ENST00000393454 REC8O95072 547 aa10.52□□□□□ -0.73
TDP1-203ENST00000393454 TIMM10P62072 90 aa10.52□□□□□ -0.73
TDP1-203ENST00000393454 ERFEQ4G0M1 354 aa10.52□□□□□ -0.73
TDP1-203ENST00000393454 GPR108Q9NPR9 543 aa10.52□□□□□ -0.73
TDP1-203ENST00000393454 SCN7AQ01118 1682 aa10.52□□□□□ -0.73
TDP1-203ENST00000393454 APBA3O96018 575 aa10.51□□□□□ -0.73
TDP1-203ENST00000393454 SLC4A3P48751 1232 aa10.51□□□□□ -0.73
TDP1-203ENST00000393454 CCDC152Q4G0S7 254 aa10.51□□□□□ -0.73
TDP1-203ENST00000393454 METTL24Q5JXM2 366 aa10.51□□□□□ -0.73
TDP1-203ENST00000393454 EVI5LQ96CN4 794 aa10.51□□□□□ -0.73
TDP1-203ENST00000393454 ESYT1Q9BSJ8 1104 aa10.51□□□□□ -0.73
TDP1-203ENST00000393454 AKAP2Q9Y2D5 859 aa10.51□□□□□ -0.73
TDP1-203ENST00000393454 A0A1B0GUL7 405 aa10.51□□□□□ -0.73
TDP1-203ENST00000393454 RGL2O15211 777 aa10.51□□□□□ -0.73
TDP1-203ENST00000393454 NPHP1O15259 732 aa10.51□□□□□ -0.73
TDP1-203ENST00000393454 RBM25P49756 843 aaKnown RBP10.51□□□□□ -0.73
TDP1-203ENST00000393454 BECN1Q14457 450 aa10.51□□□□□ -0.73
TDP1-203ENST00000393454 TXNRD1Q16881 649 aa10.51□□□□□ -0.73
TDP1-203ENST00000393454 GORABQ5T7V8 394 aa10.51□□□□□ -0.73
TDP1-203ENST00000393454 NBPF5PQ86XG9 351 aaPredicted RBP10.51□□□□□ -0.73
TDP1-203ENST00000393454 NYXQ9GZU5 481 aa10.51□□□□□ -0.73
TDP1-203ENST00000393454 DIAPH3Q9NSV4 1193 aa10.51□□□□□ -0.73
TDP1-203ENST00000393454 DDX60Q8IY21 1712 aaKnown RBP10.5□□□□□ -0.73
TDP1-203ENST00000393454 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.5□□□□□ -0.73
TDP1-203ENST00000393454 ATP5JP18859 108 aa10.5□□□□□ -0.73
TDP1-203ENST00000393454 DNAJC2Q99543 621 aaKnown RBP10.5□□□□□ -0.73
TDP1-203ENST00000393454 MPHOSPH8Q99549 860 aa10.5□□□□□ -0.73
TDP1-203ENST00000393454 USP26Q9BXU7 913 aa10.5□□□□□ -0.73
TDP1-203ENST00000393454 SEC31BQ9NQW1 1179 aa10.5□□□□□ -0.73
TDP1-203ENST00000393454 RIPOR2Q9Y4F9 1068 aa10.5□□□□□ -0.73
TDP1-203ENST00000393454 EP400Q96L91 3159 aa10.5□□□□□ -0.73
TDP1-203ENST00000393454 POTEAQ6S8J7 498 aa10.49□□□□□ -0.73
TDP1-203ENST00000393454 RGS17Q9UGC6 210 aaPredicted RBP10.49□□□□□ -0.73
TDP1-203ENST00000393454 ZNF609O15014 1411 aa10.49□□□□□ -0.73
TDP1-203ENST00000393454 HMGB2P26583 209 aaKnown RBP10.49□□□□□ -0.73
TDP1-203ENST00000393454 IGHMBP2P38935 993 aaKnown RBP10.49□□□□□ -0.73
TDP1-203ENST00000393454 CWC27Q6UX04 472 aaKnown RBP10.49□□□□□ -0.73
TDP1-203ENST00000393454 TPTE2Q6XPS3 522 aa10.49□□□□□ -0.73
TDP1-203ENST00000393454 FSD1Q9BTV5 496 aa10.49□□□□□ -0.73
TDP1-203ENST00000393454 ANO2Q9NQ90 1003 aa10.49□□□□□ -0.73
TDP1-203ENST00000393454 C4AP0C0L4 1744 aa10.49□□□□□ -0.73
TDP1-203ENST00000393454 ATP2B3Q16720 1220 aa10.48□□□□□ -0.73
TDP1-203ENST00000393454 PROM2Q8N271 834 aa10.48□□□□□ -0.73
TDP1-203ENST00000393454 CCDC24Q8N4L8 307 aa10.48□□□□□ -0.73
TDP1-203ENST00000393454 RUFY2Q8WXA3 655 aa10.48□□□□□ -0.73
TDP1-203ENST00000393454 XAGE2Q96GT9 111 aa10.48□□□□□ -0.73
TDP1-203ENST00000393454 LAMB2P55268 1798 aa10.48□□□□□ -0.73
TDP1-203ENST00000393454 MROH5Q6ZUA9 1318 aa10.48□□□□□ -0.73
TDP1-203ENST00000393454 ADORA1P30542 326 aa10.48□□□□□ -0.73
TDP1-203ENST00000393454 CCDC158Q5M9N0 1113 aa10.48□□□□□ -0.73
TDP1-203ENST00000393454 TTC39AQ5SRH9 613 aa10.48□□□□□ -0.73
TDP1-203ENST00000393454 HELBQ8NG08 1087 aaPredicted RBP10.48□□□□□ -0.73
TDP1-203ENST00000393454 EDC3Q96F86 508 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms