RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 PDGFDQ9GZP0 370 aaPredicted RBP13.47□□□□□ -0.25
PDGFD-202ENST00000393158 LMBR1LQ6UX01 489 aa13.46□□□□□ -0.25
PDGFD-202ENST00000393158 MYH13Q9UKX3 1938 aa13.46□□□□□ -0.25
PDGFD-202ENST00000393158 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.46□□□□□ -0.25
PDGFD-202ENST00000393158 PI4K2BQ8TCG2 481 aa13.46□□□□□ -0.25
PDGFD-202ENST00000393158 DUOX1Q9NRD9 1551 aa13.46□□□□□ -0.26
PDGFD-202ENST00000393158 ZNF609O15014 1411 aa13.46□□□□□ -0.26
PDGFD-202ENST00000393158 APBA3O96018 575 aa13.46□□□□□ -0.26
PDGFD-202ENST00000393158 ANKRD45Q5TZF3 282 aa13.46□□□□□ -0.26
PDGFD-202ENST00000393158 SSFA2P28290 1259 aa13.45□□□□□ -0.26
PDGFD-202ENST00000393158 DDR1Q08345 913 aa13.45□□□□□ -0.26
PDGFD-202ENST00000393158 COL23A1Q86Y22 540 aaPredicted RBP13.45□□□□□ -0.26
PDGFD-202ENST00000393158 BACH2Q9BYV9 841 aa13.45□□□□□ -0.26
PDGFD-202ENST00000393158 GREM2Q9H772 168 aa13.45□□□□□ -0.26
PDGFD-202ENST00000393158 FAM161AQ3B820 660 aa13.45□□□□□ -0.26
PDGFD-202ENST00000393158 PUS3Q9BZE2 481 aaKnown RBP13.45□□□□□ -0.26
PDGFD-202ENST00000393158 TLR7Q9NYK1 1049 aaKnown RBP13.45□□□□□ -0.26
PDGFD-202ENST00000393158 ZNF594Q96JF6 807 aaPredicted RBP13.45□□□□□ -0.26
PDGFD-202ENST00000393158 STAP2Q9UGK3 403 aa13.45□□□□□ -0.26
PDGFD-202ENST00000393158 ADRA2BP18089 450 aa13.44□□□□□ -0.26
PDGFD-202ENST00000393158 SLC10A5Q5PT55 438 aa13.44□□□□□ -0.26
PDGFD-202ENST00000393158 NUTM1Q86Y26 1132 aa13.44□□□□□ -0.26
PDGFD-202ENST00000393158 RHPN1Q8TCX5 695 aa13.44□□□□□ -0.26
PDGFD-202ENST00000393158 CHD4Q14839 1912 aa13.44□□□□□ -0.26
PDGFD-202ENST00000393158 NFIXQ14938 502 aa13.44□□□□□ -0.26
PDGFD-202ENST00000393158 ERFEQ4G0M1 354 aa13.44□□□□□ -0.26
PDGFD-202ENST00000393158 LRRC24Q50LG9 513 aa13.44□□□□□ -0.26
PDGFD-202ENST00000393158 RTCBQ9Y3I0 505 aaKnown RBP13.44□□□□□ -0.26
PDGFD-202ENST00000393158 RGS3P49796 1198 aa13.44□□□□□ -0.26
PDGFD-202ENST00000393158 CTSWP56202 376 aa13.44□□□□□ -0.26
PDGFD-202ENST00000393158 EN1Q05925 392 aaPredicted RBP13.44□□□□□ -0.26
PDGFD-202ENST00000393158 TSHZ3Q63HK5 1081 aa13.44□□□□□ -0.26
PDGFD-202ENST00000393158 PKNOX2Q96KN3 472 aa13.44□□□□□ -0.26
PDGFD-202ENST00000393158 EAF2Q96CJ1 260 aaPredicted RBP13.43□□□□□ -0.26
PDGFD-202ENST00000393158 HSP90AB3PQ58FF7 597 aa13.43□□□□□ -0.26
PDGFD-202ENST00000393158 NIP7Q9Y221 180 aaKnown RBP eCLIP13.43□□□□□ -0.26
PDGFD-202ENST00000393158 RIPOR2Q9Y4F9 1068 aa13.43□□□□□ -0.26
PDGFD-202ENST00000393158 IRS2Q9Y4H2 1338 aa13.43□□□□□ -0.26
PDGFD-202ENST00000393158 SNED1Q8TER0 1413 aa13.42□□□□□ -0.26
PDGFD-202ENST00000393158 POLRMTO00411 1230 aaKnown RBP13.42□□□□□ -0.26
PDGFD-202ENST00000393158 IRS4O14654 1257 aaPredicted RBP13.42□□□□□ -0.26
PDGFD-202ENST00000393158 PHF14O94880 888 aa13.42□□□□□ -0.26
PDGFD-202ENST00000393158 DEFB132Q7Z7B7 95 aa13.42□□□□□ -0.26
PDGFD-202ENST00000393158 HCLS1P14317 486 aaPredicted RBP13.42□□□□□ -0.26
PDGFD-202ENST00000393158 WTIPA6NIX2 430 aaPredicted RBP13.41□□□□□ -0.26
PDGFD-202ENST00000393158 PDE1AP54750 535 aa13.41□□□□□ -0.26
PDGFD-202ENST00000393158 LRRCC1Q9C099 1032 aa13.41□□□□□ -0.26
PDGFD-202ENST00000393158 IL25Q9H293 177 aa13.41□□□□□ -0.26
PDGFD-202ENST00000393158 IL1RAPL2Q9NP60 686 aa13.41□□□□□ -0.26
PDGFD-202ENST00000393158 SLX4Q8IY92 1834 aa13.41□□□□□ -0.26
PDGFD-202ENST00000393158 AK7Q96M32 723 aa13.41□□□□□ -0.26
PDGFD-202ENST00000393158 KLRG2A4D1S0 409 aaPredicted RBP13.41□□□□□ -0.26
PDGFD-202ENST00000393158 SURF6O75683 361 aaKnown RBP13.41□□□□□ -0.26
PDGFD-202ENST00000393158 PARP10Q53GL7 1025 aa13.41□□□□□ -0.26
PDGFD-202ENST00000393158 TRAPPC3LQ5T215 181 aa13.41□□□□□ -0.26
PDGFD-202ENST00000393158 SH3TC1Q8TE82 1336 aa13.4□□□□□ -0.26
PDGFD-202ENST00000393158 SEC31BQ9NQW1 1179 aa13.4□□□□□ -0.26
PDGFD-202ENST00000393158 TRMT112Q9UI30 125 aaKnown RBP13.4□□□□□ -0.26
PDGFD-202ENST00000393158 RAB11FIP3O75154 756 aa13.4□□□□□ -0.26
PDGFD-202ENST00000393158 BMP2KLQ5H9B9 411 aa13.4□□□□□ -0.26
PDGFD-202ENST00000393158 TTC22Q5TAA0 569 aa13.4□□□□□ -0.26
PDGFD-202ENST00000393158 UTP14AQ9BVJ6 771 aaKnown RBP13.4□□□□□ -0.26
PDGFD-202ENST00000393158 PDE8AO60658 829 aa13.4□□□□□ -0.26
PDGFD-202ENST00000393158 HMMRO75330 724 aa13.4□□□□□ -0.26
PDGFD-202ENST00000393158 CIAO1O76071 339 aa13.39□□□□□ -0.27
PDGFD-202ENST00000393158 SF3B3Q15393 1217 aaKnown RBP13.39□□□□□ -0.27
PDGFD-202ENST00000393158 DBNLQ9UJU6 430 aaKnown RBP13.39□□□□□ -0.27
PDGFD-202ENST00000393158 CRY2Q49AN0 593 aa13.39□□□□□ -0.27
PDGFD-202ENST00000393158 CDK5RAP2Q96SN8 1893 aa13.39□□□□□ -0.27
PDGFD-202ENST00000393158 ITGA6P23229 1130 aa13.39□□□□□ -0.27
PDGFD-202ENST00000393158 TFCP2Q12800 502 aa13.39□□□□□ -0.27
PDGFD-202ENST00000393158 SIL1Q9H173 461 aa13.39□□□□□ -0.27
PDGFD-202ENST00000393158 A0A0U1RQG5 324 aaPredicted RBP13.38□□□□□ -0.27
PDGFD-202ENST00000393158 APBB1O00213 710 aa13.38□□□□□ -0.27
PDGFD-202ENST00000393158 PRR5LQ6MZQ0 368 aa13.38□□□□□ -0.27
PDGFD-202ENST00000393158 COL1A1P02452 1464 aaPredicted RBP13.38□□□□□ -0.27
PDGFD-202ENST00000393158 KIF1BPQ96EK5 621 aa13.38□□□□□ -0.27
PDGFD-202ENST00000393158 CCDC24Q8N4L8 307 aa13.37□□□□□ -0.27
PDGFD-202ENST00000393158 CCDC85AQ96PX6 553 aaPredicted RBP13.37□□□□□ -0.27
PDGFD-202ENST00000393158 LAMA4Q16363 1823 aa13.37□□□□□ -0.27
PDGFD-202ENST00000393158 FGFR2P21802 821 aa13.37□□□□□ -0.27
PDGFD-202ENST00000393158 PSME4Q14997 1843 aa13.37□□□□□ -0.27
PDGFD-202ENST00000393158 SLC15A2Q16348 729 aa13.37□□□□□ -0.27
PDGFD-202ENST00000393158 EYA2O00167 538 aa13.36□□□□□ -0.27
PDGFD-202ENST00000393158 SDSP20132 328 aa13.36□□□□□ -0.27
PDGFD-202ENST00000393158 MX1P20591 662 aa13.36□□□□□ -0.27
PDGFD-202ENST00000393158 TNNI3KQ59H18 835 aa13.36□□□□□ -0.27
PDGFD-202ENST00000393158 FPGT-TNNI3KV9GXZ4 949 aa13.36□□□□□ -0.27
PDGFD-202ENST00000393158 AOX1Q06278 1338 aa13.36□□□□□ -0.27
PDGFD-202ENST00000393158 NBR1Q14596 966 aa13.36□□□□□ -0.27
PDGFD-202ENST00000393158 RFC4P35249 363 aa13.35□□□□□ -0.27
PDGFD-202ENST00000393158 DEKP35659 375 aaKnown RBP13.35□□□□□ -0.27
PDGFD-202ENST00000393158 ZNF652Q9Y2D9 606 aa13.35□□□□□ -0.27
PDGFD-202ENST00000393158 FAM177BA6PVY3 158 aa13.35□□□□□ -0.27
PDGFD-202ENST00000393158 BICDL1Q6ZP65 573 aa13.35□□□□□ -0.27
PDGFD-202ENST00000393158 UBE2Q2Q8WVN8 375 aa13.35□□□□□ -0.27
PDGFD-202ENST00000393158 SNAP23O00161 211 aa13.34□□□□□ -0.27
PDGFD-202ENST00000393158 CELF1Q92879 486 aaKnown RBP13.34□□□□□ -0.27
PDGFD-202ENST00000393158 SCN9AQ15858 1988 aa13.34□□□□□ -0.27
PDGFD-202ENST00000393158 ZPR1O75312 459 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms