RNA–Protein interactions for RNA: ENST00000393028.5

GIPC1-202, Transcript of GIPC PDZ domain containing family member 1, humanhuman

TSL 3 BASIC

Gene GIPC1, Length 1,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIPC1-202ENST00000393028 FAM161AQ3B820 660 aa35.25■■■■□ 3.23
GIPC1-202ENST00000393028 COL4A1P02462 1669 aa35.25■■■■□ 3.23
GIPC1-202ENST00000393028 CACNA1SQ13698 1873 aa35.24■■■■□ 3.23
GIPC1-202ENST00000393028 PNMA6EA0A0J9YXQ4 647 aa35.24■■■■□ 3.23
GIPC1-202ENST00000393028 BRIP1Q9BX63 1249 aa35.24■■■■□ 3.23
GIPC1-202ENST00000393028 CSF1RP07333 972 aa35.23■■■■□ 3.23
GIPC1-202ENST00000393028 SIRT2Q8IXJ6 389 aa35.23■■■■□ 3.23
GIPC1-202ENST00000393028 GREM2Q9H772 168 aa35.23■■■■□ 3.23
GIPC1-202ENST00000393028 KIAA1551Q9HCM1 1747 aa35.22■■■■□ 3.23
GIPC1-202ENST00000393028 SRGAP3O43295 1099 aa35.22■■■■□ 3.23
GIPC1-202ENST00000393028 MTX1Q13505 466 aa35.22■■■■□ 3.23
GIPC1-202ENST00000393028 DLEC1Q9Y238 1755 aa35.21■■■■□ 3.23
GIPC1-202ENST00000393028 ATP8B2P98198 1209 aa35.21■■■■□ 3.23
GIPC1-202ENST00000393028 SF3B3Q15393 1217 aaKnown RBP35.21■■■■□ 3.23
GIPC1-202ENST00000393028 CCDC152Q4G0S7 254 aa35.21■■■■□ 3.23
GIPC1-202ENST00000393028 RPAP2Q8IXW5 612 aaPredicted RBP35.2■■■■□ 3.23
GIPC1-202ENST00000393028 PDE6BP35913 854 aa35.18■■■■□ 3.22
GIPC1-202ENST00000393028 KLHL34Q8N239 644 aa35.18■■■■□ 3.22
GIPC1-202ENST00000393028 CRY2Q49AN0 593 aa35.17■■■■□ 3.22
GIPC1-202ENST00000393028 ERICH6BQ5W0A0 696 aa35.17■■■■□ 3.22
GIPC1-202ENST00000393028 SEC31BQ9NQW1 1179 aa35.17■■■■□ 3.22
GIPC1-202ENST00000393028 KLRG2A4D1S0 409 aaPredicted RBP35.16■■■■□ 3.22
GIPC1-202ENST00000393028 ITGA6P23229 1130 aa35.16■■■■□ 3.22
GIPC1-202ENST00000393028 PPP1R1BQ9UD71 204 aaPredicted RBP35.16■■■■□ 3.22
GIPC1-202ENST00000393028 RTL9Q8NET4 1388 aa35.16■■■■□ 3.22
GIPC1-202ENST00000393028 POLA2Q14181 598 aa35.15■■■■□ 3.22
GIPC1-202ENST00000393028 C2CD5Q86YS7 1000 aa35.15■■■■□ 3.22
GIPC1-202ENST00000393028 KLHDC4Q8TBB5 520 aa35.15■■■■□ 3.22
GIPC1-202ENST00000393028 SSH3Q8TE77 659 aa35.15■■■■□ 3.22
GIPC1-202ENST00000393028 RPGRQ92834 1020 aaKnown RBP35.15■■■■□ 3.22
GIPC1-202ENST00000393028 LRP5O75197 1615 aa35.15■■■■□ 3.22
GIPC1-202ENST00000393028 CHRNA5P30532 468 aa35.14■■■■□ 3.22
GIPC1-202ENST00000393028 RFX5P48382 616 aaPredicted RBP35.14■■■■□ 3.22
GIPC1-202ENST00000393028 IFIT5Q13325 482 aaKnown RBP35.14■■■■□ 3.22
GIPC1-202ENST00000393028 CCDC57Q2TAC2 916 aa35.14■■■■□ 3.22
GIPC1-202ENST00000393028 ZNF594Q96JF6 807 aaPredicted RBP35.14■■■■□ 3.22
GIPC1-202ENST00000393028 GTF3C3Q9Y5Q9 886 aa35.14■■■■□ 3.22
GIPC1-202ENST00000393028 PA2G4Q9UQ80 394 aaKnown RBP35.13■■■■□ 3.21
GIPC1-202ENST00000393028 ANKRD18BA2A2Z9 1011 aa35.12■■■■□ 3.21
GIPC1-202ENST00000393028 HMMRO75330 724 aa35.12■■■■□ 3.21
GIPC1-202ENST00000393028 SRGNP10124 158 aa35.11■■■■□ 3.21
GIPC1-202ENST00000393028 DDX46Q7L014 1031 aaKnown RBP35.11■■■■□ 3.21
GIPC1-202ENST00000393028 BRCA1P38398 1863 aaKnown RBP35.1■■■■□ 3.21
GIPC1-202ENST00000393028 TAF7LQ5H9L4 462 aa35.09■■■■□ 3.21
GIPC1-202ENST00000393028 H0YIN7 160 aa35.09■■■■□ 3.21
GIPC1-202ENST00000393028 IGHDP01880 384 aa35.09■■■■□ 3.21
GIPC1-202ENST00000393028 PTPN12Q05209 780 aaKnown RBP35.09■■■■□ 3.21
GIPC1-202ENST00000393028 HDAC1Q13547 482 aaPredicted RBP35.09■■■■□ 3.21
GIPC1-202ENST00000393028 CELF1Q92879 486 aaKnown RBP35.09■■■■□ 3.21
GIPC1-202ENST00000393028 PPP4R2Q9NY27 417 aa35.09■■■■□ 3.21
GIPC1-202ENST00000393028 NPR1P16066 1061 aa35.08■■■■□ 3.21
GIPC1-202ENST00000393028 RBM17Q96I25 401 aaKnown RBP35.08■■■■□ 3.21
GIPC1-202ENST00000393028 SIL1Q9H173 461 aa35.08■■■■□ 3.21
GIPC1-202ENST00000393028 A0A1B0GUL6 1792 aa35.08■■■■□ 3.21
GIPC1-202ENST00000393028 HOXA10P31260 410 aaPredicted RBP35.07■■■■□ 3.2
GIPC1-202ENST00000393028 SLX4Q8IY92 1834 aa35.06■■■■□ 3.2
GIPC1-202ENST00000393028 A0A0G2JLW4 131 aa35.06■■■■□ 3.2
GIPC1-202ENST00000393028 DPEP1P16444 411 aa35.06■■■■□ 3.2
GIPC1-202ENST00000393028 B4GALNT3Q6L9W6 998 aa35.06■■■■□ 3.2
GIPC1-202ENST00000393028 ZNF622Q969S3 477 aaKnown RBP eCLIP35.06■■■■□ 3.2
GIPC1-202ENST00000393028 MASTLQ96GX5 879 aa35.06■■■■□ 3.2
GIPC1-202ENST00000393028 CDC5LQ99459 802 aaKnown RBP35.06■■■■□ 3.2
GIPC1-202ENST00000393028 CD2APQ9Y5K6 639 aa35.06■■■■□ 3.2
GIPC1-202ENST00000393028 CCDC136Q96JN2 1154 aa35.05■■■■□ 3.2
GIPC1-202ENST00000393028 RWDD1Q9H446 243 aaPredicted RBP35.05■■■■□ 3.2
GIPC1-202ENST00000393028 GRAPQ13588 217 aa35.04■■■■□ 3.2
GIPC1-202ENST00000393028 GRAPLQ8TC17 118 aaPredicted RBP35.04■■■■□ 3.2
GIPC1-202ENST00000393028 COPRSQ9NQ92 184 aa35.04■■■■□ 3.2
GIPC1-202ENST00000393028 EXOC6BQ9Y2D4 811 aa35.04■■■■□ 3.2
GIPC1-202ENST00000393028 ANKRD18AQ8IVF6 992 aa35.03■■■■□ 3.2
GIPC1-202ENST00000393028 PUS3Q9BZE2 481 aaKnown RBP35.03■■■■□ 3.2
GIPC1-202ENST00000393028 PDZRN3Q9UPQ7 1066 aa35.03■■■■□ 3.2
GIPC1-202ENST00000393028 SURF6O75683 361 aaKnown RBP35.03■■■■□ 3.2
GIPC1-202ENST00000393028 STYK1Q6J9G0 422 aa35.03■■■■□ 3.2
GIPC1-202ENST00000393028 SLC51AQ86UW1 340 aa35.03■■■■□ 3.2
GIPC1-202ENST00000393028 CRAMP1Q96RY5 1269 aa35.03■■■■□ 3.2
GIPC1-202ENST00000393028 IGHMBP2P38935 993 aaKnown RBP35.02■■■■□ 3.2
GIPC1-202ENST00000393028 TGFB2P61812 414 aa35.02■■■■□ 3.2
GIPC1-202ENST00000393028 NLGN2Q8NFZ4 835 aa35.02■■■■□ 3.2
GIPC1-202ENST00000393028 FHDC1Q9C0D6 1143 aaPredicted RBP35.02■■■■□ 3.2
GIPC1-202ENST00000393028 LRRC37AA6NMS7 1700 aa35.01■■■■□ 3.2
GIPC1-202ENST00000393028 LRRC24Q50LG9 513 aa35.01■■■■□ 3.19
GIPC1-202ENST00000393028 KCNA3P22001 575 aa35■■■■□ 3.19
GIPC1-202ENST00000393028 RPS8P62241 208 aaKnown RBP35■■■■□ 3.19
GIPC1-202ENST00000393028 LDHAL6AQ6ZMR3 332 aa34.99■■■■□ 3.19
GIPC1-202ENST00000393028 MPHOSPH8Q99549 860 aa34.99■■■■□ 3.19
GIPC1-202ENST00000393028 EYA2O00167 538 aa34.98■■■■□ 3.19
GIPC1-202ENST00000393028 APBB1O00213 710 aa34.98■■■■□ 3.19
GIPC1-202ENST00000393028 DCTPP1Q9H773 170 aa34.98■■■■□ 3.19
GIPC1-202ENST00000393028 CNNM1Q9NRU3 951 aa34.98■■■■□ 3.19
GIPC1-202ENST00000393028 WWC3Q9ULE0 1092 aa34.98■■■■□ 3.19
GIPC1-202ENST00000393028 NOP58Q9Y2X3 529 aaKnown RBP34.98■■■■□ 3.19
GIPC1-202ENST00000393028 OS9Q13438 667 aaPredicted RBP34.97■■■■□ 3.19
GIPC1-202ENST00000393028 ATG9AQ7Z3C6 839 aa34.97■■■■□ 3.19
GIPC1-202ENST00000393028 PPEF1O14829 653 aaPredicted RBP34.96■■■■□ 3.19
GIPC1-202ENST00000393028 ALDH1B1P30837 517 aa34.96■■■■□ 3.19
GIPC1-202ENST00000393028 G3BP1Q13283 466 aaKnown RBP eCLIP34.96■■■■□ 3.19
GIPC1-202ENST00000393028 PRPF40BQ6NWY9 871 aaKnown RBP34.95■■■■□ 3.19
GIPC1-202ENST00000393028 CNKSR1Q969H4 720 aa34.95■■■■□ 3.19
GIPC1-202ENST00000393028 KDM2BQ8NHM5 1336 aa34.94■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms